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Lj6g3v1371810.1

Overview

Field Value
Gene ID Lj6g3v1371810
Transcript ID Lj6g3v1371810.1
Lotus japonicus genome version MG20 v3.0
Description Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357449323|ref|XP_003594938.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27009
1 344 344 1.20E-230 –
PANTHER
PTHR27009:SF17
1 344 344 1.20E-230 –
SUPERFAMILY
SSF56112
11 297 287 1.64E-75
IPR011009
Gene3D
G3DSA:3.30.200.20
14 100 87 1.10E-21 –
ProSiteProfiles
PS50011
26 307 282 35.538
IPR000719
SMART
SM00220
26 296 271 4.10E-38
IPR000719
Pfam
PF00069
30 294 265 1.90E-48
IPR000719
ProSitePatterns
PS00107
32 54 23 –
IPR017441
Gene3D
G3DSA:1.10.510.10
104 331 228 5.30E-44 –
ProSitePatterns
PS00108
146 158 13 –
IPR008271
MobiDBLite
mobidb-lite
318 358 41 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj6g3v1371810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1371810.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.