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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1513530 |
| Transcript ID | Lj6g3v1513530.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: topless-related protein 2-like [Cicer arietinum] gi|502150907|ref|XP_004508183.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 590 | 590 | 0 | – | |
| PANTHER | 1 | 590 | 590 | 0 | ||
| SMART | 4 | 36 | 33 | 7.00E-04 | ||
| ProSiteProfiles | 4 | 36 | 33 | 9.704 | ||
| ProSiteProfiles | 34 | 92 | 59 | 13.001 | ||
| SMART | 34 | 92 | 59 | 8.70E-13 | ||
| SUPERFAMILY | 320 | 586 | 267 | 2.98E-32 | ||
| Gene3D | 336 | 585 | 250 | 2.30E-30 | ||
| SMART | 336 | 375 | 40 | 0.005 | ||
| ProSiteProfiles | 342 | 492 | 151 | 11.787 | ||
| SMART | 397 | 436 | 40 | 22 | ||
| SMART | 442 | 483 | 42 | 3.30E-04 | ||
| ProSiteProfiles | 449 | 492 | 44 | 9.272 | ||
| Pfam | 449 | 483 | 35 | 0.0025 | ||
| ProSitePatterns | 470 | 484 | 15 | – | ||
| SMART | 485 | 526 | 42 | 0.12 | ||
| SMART | 529 | 572 | 44 | 98 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj6g3v1513530.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1513530.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.