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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1618170 |
| Transcript ID | Lj6g3v1618170.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable folate-biopterin transporter 7-like [Cicer arietinum] gi|502080237|ref|XP_004486501.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 89 | 89 | – | – | |
| PANTHER | 14 | 435 | 422 | 4.50E-287 | – | |
| PANTHER | 14 | 435 | 422 | 4.50E-287 | – | |
| TIGRFAM | 19 | 427 | 409 | 1.80E-65 | ||
| Pfam | 22 | 197 | 176 | 3.10E-41 | ||
| SUPERFAMILY | 28 | 432 | 405 | 4.58E-25 | ||
| Gene3D | 31 | 206 | 176 | 2.70E-11 | – | |
| Phobius | 90 | 114 | 25 | – | – | |
| TMHMM | 91 | 113 | 23 | – | – | |
| Phobius | 115 | 154 | 40 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 155 | 178 | 24 | – | – | |
| Phobius | 179 | 183 | 5 | – | – | |
| TMHMM | 183 | 201 | 19 | – | – | |
| Phobius | 184 | 201 | 18 | – | – | |
| Phobius | 202 | 235 | 34 | – | – | |
| TMHMM | 234 | 256 | 23 | – | – | |
| Phobius | 236 | 257 | 22 | – | – | |
| Pfam | 240 | 425 | 186 | 4.30E-42 | ||
| Phobius | 258 | 262 | 5 | – | – | |
| TMHMM | 263 | 285 | 23 | – | – | |
| Phobius | 263 | 286 | 24 | – | – | |
| Phobius | 287 | 297 | 11 | – | – | |
| Phobius | 298 | 317 | 20 | – | – | |
| TMHMM | 298 | 320 | 23 | – | – | |
| Phobius | 318 | 328 | 11 | – | – | |
| Phobius | 329 | 354 | 26 | – | – | |
| TMHMM | 333 | 355 | 23 | – | – | |
| Phobius | 355 | 365 | 11 | – | – | |
| Phobius | 366 | 392 | 27 | – | – | |
| TMHMM | 370 | 392 | 23 | – | – | |
| Phobius | 393 | 403 | 11 | – | – | |
| TMHMM | 399 | 421 | 23 | – | – | |
| Phobius | 404 | 427 | 24 | – | – | |
| Phobius | 428 | 435 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj6g3v1618170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1618170.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.