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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1742810 |
| Transcript ID | Lj6g3v1742810.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CASP-like protein GSVIVT00013502001-like [Glycine max] gi|356557971|ref|XP_003547283.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | – | – | |
| PANTHER | 13 | 195 | 183 | 4.20E-122 | – | |
| PANTHER | 13 | 195 | 183 | 4.20E-122 | – | |
| Pfam | 26 | 174 | 149 | 2.30E-46 | ||
| TMHMM | 33 | 52 | 20 | – | – | |
| TIGRFAM | 33 | 186 | 154 | 1.40E-46 | ||
| Phobius | 33 | 51 | 19 | – | – | |
| Phobius | 52 | 70 | 19 | – | – | |
| Phobius | 71 | 90 | 20 | – | – | |
| TMHMM | 75 | 97 | 23 | – | – | |
| Phobius | 91 | 109 | 19 | – | – | |
| Phobius | 110 | 133 | 24 | – | – | |
| TMHMM | 110 | 132 | 23 | – | – | |
| Phobius | 134 | 165 | 32 | – | – | |
| TMHMM | 166 | 188 | 23 | – | – | |
| Phobius | 166 | 188 | 23 | – | – | |
| Phobius | 189 | 202 | 14 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj6g3v1742810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1742810.1, powered by CORGI.
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