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Lj6g3v1776650.1

Overview

Field Value
Gene ID Lj6g3v1776650
Transcript ID Lj6g3v1776650.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Cicer arietinum] gi|502149753|ref|XP_004507651.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23257:SF475
9 355 347 2.00E-258
IPR015783
PANTHER
PTHR23257
9 355 347 2.00E-258 –
MobiDBLite
mobidb-lite
14 36 23 – –
SUPERFAMILY
SSF56112
54 326 273 3.33E-78
IPR011009
Gene3D
G3DSA:3.30.200.20
58 138 81 1.70E-16 –
SMART
SM00220
77 333 257 2.30E-59
IPR000719
ProSiteProfiles
PS50011
77 345 269 40.216
IPR000719
Pfam
PF07714
79 326 248 1.10E-63
IPR001245
CDD
cd13999
84 326 243 1.39E-121 –
Gene3D
G3DSA:1.10.510.10
139 325 187 3.10E-62 –
PRINTS
PR00109
150 163 14 3.70E-19
IPR001245
PRINTS
PR00109
188 206 19 3.70E-19
IPR001245
ProSitePatterns
PS00108
194 206 13 –
IPR008271
PRINTS
PR00109
234 244 11 3.70E-19
IPR001245
PRINTS
PR00109
253 275 23 3.70E-19
IPR001245
PRINTS
PR00109
297 319 23 3.70E-19
IPR001245

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004674
Molecular function Protein serine/threonine kinase activity Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of
GO:0071244
Biological process Cellular response to carbon dioxide Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus.
Subterm of

Genome browser

LORE1 insertions 32

Expression data

Expression pattern

Expression pattern of Lj6g3v1776650.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1776650.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.