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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1776670 |
| Transcript ID | Lj6g3v1776670.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: EH domain-containing protein 1-like [Glycine max] gi|356557953|ref|XP_003547274.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 539 | 539 | 0 | – | |
| PANTHER | 1 | 539 | 539 | 0 | – | |
| Gene3D | 7 | 105 | 99 | 7.40E-22 | ||
| SMART | 8 | 100 | 93 | 1.70E-11 | ||
| SUPERFAMILY | 12 | 86 | 75 | 1.96E-20 | ||
| Pfam | 13 | 80 | 68 | 1.60E-07 | ||
| ProSiteProfiles | 14 | 38 | 25 | 5.559 | ||
| ProSiteProfiles | 15 | 84 | 70 | 12.375 | ||
| SMART | 18 | 46 | 29 | 20 | ||
| CDD | 19 | 85 | 67 | 3.11E-22 | – | |
| ProSiteProfiles | 48 | 83 | 36 | 10.859 | ||
| SMART | 52 | 80 | 29 | 0.75 | ||
| Pfam | 162 | 194 | 33 | 2.00E-13 | ||
| SUPERFAMILY | 188 | 464 | 277 | 5.06E-31 | ||
| ProSiteProfiles | 193 | 426 | 234 | 29.613 | ||
| Gene3D | 197 | 245 | 49 | 6.80E-15 | ||
| CDD | 198 | 440 | 243 | 2.29E-140 | – | |
| Pfam | 199 | 358 | 160 | 1.10E-10 | ||
| Gene3D | 287 | 375 | 89 | 6.80E-15 | ||
| Coils | 465 | 485 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj6g3v1776670.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1776670.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.