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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1886580 |
| Transcript ID | Lj6g3v1886580.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable serine incorporator-like [Cicer arietinum] gi|502079105|ref|XP_004486156.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 408 | 408 | 0 | – | |
| PANTHER | 1 | 408 | 408 | 0 | ||
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 18 | 18 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| Pfam | 3 | 406 | 404 | 1.10E-113 | ||
| Phobius | 3 | 13 | 11 | – | – | |
| Phobius | 14 | 18 | 5 | – | – | |
| Phobius | 19 | 27 | 9 | – | – | |
| Phobius | 28 | 46 | 19 | – | – | |
| TMHMM | 30 | 47 | 18 | – | – | |
| Phobius | 47 | 74 | 28 | – | – | |
| TMHMM | 75 | 97 | 23 | – | – | |
| Phobius | 75 | 97 | 23 | – | – | |
| Phobius | 98 | 116 | 19 | – | – | |
| TMHMM | 110 | 129 | 20 | – | – | |
| Phobius | 117 | 140 | 24 | – | – | |
| TMHMM | 134 | 156 | 23 | – | – | |
| Phobius | 141 | 146 | 6 | – | – | |
| Phobius | 147 | 163 | 17 | – | – | |
| Phobius | 164 | 174 | 11 | – | – | |
| Phobius | 175 | 200 | 26 | – | – | |
| TMHMM | 177 | 199 | 23 | – | – | |
| Phobius | 201 | 211 | 11 | – | – | |
| TMHMM | 209 | 231 | 23 | – | – | |
| Phobius | 212 | 231 | 20 | – | – | |
| Phobius | 232 | 236 | 5 | – | – | |
| TMHMM | 236 | 258 | 23 | – | – | |
| Phobius | 237 | 256 | 20 | – | – | |
| Phobius | 257 | 276 | 20 | – | – | |
| TMHMM | 273 | 295 | 23 | – | – | |
| Phobius | 277 | 295 | 19 | – | – | |
| Phobius | 296 | 337 | 42 | – | – | |
| MobiDBLite | 300 | 329 | 30 | – | – | |
| TMHMM | 336 | 358 | 23 | – | – | |
| Phobius | 338 | 358 | 21 | – | – | |
| Phobius | 359 | 408 | 50 | – | – | |
| TMHMM | 378 | 400 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj6g3v1886580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1886580.1, powered by CORGI.
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