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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005016
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.446s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0206779.1
n.a. PREDICTED: probable serine incorporator-like [Cicer arietinum] gi|502122484|ref|XP_004497767.1| chr0 103124040 103128547 +
3 domain predictions
1 GO term
Lj0g3v0206779.2
n.a. PREDICTED: probable serine incorporator-like [Cicer arietinum] gi|502122484|ref|XP_004497767.1| chr0 103124040 103128547 +
3 domain predictions
1 GO term
Lj0g3v0260289.1
n.a. PREDICTED: serine incorporator 3-like [Glycine max] gi|356577580|ref|XP_003556902.1| chr0 135221441 135223712 -
3 domain predictions
1 GO term
Lj0g3v0263059.1
n.a. PREDICTED: probable serine incorporator-like [Cicer arietinum] gi|502103505|ref|XP_004492298.1| chr0 136431999 136435195 +
3 domain predictions
1 GO term
Lj2g3v0766630.1
n.a. Serine incorporator [Medicago truncatula] gi|357500415|ref|XP_003620496.1| chr2 11997023 12006853 -
3 domain predictions
1 GO term
Lj4g3v3093890.1
n.a. PREDICTED: serine incorporator 3-like [Glycine max] gi|356511347|ref|XP_003524388.1| chr4 41002207 41007988 +
3 domain predictions
1 GO term
Lj6g3v1886580.1
n.a. PREDICTED: probable serine incorporator-like [Cicer arietinum] gi|502079105|ref|XP_004486156.1| chr6 20906332 20911563 +
3 domain predictions
1 GO term
LotjaGi1g1v0587000.1
n.a. Serine incorporator; TAIR: AT1G16180.1 Serinc-domain containing serine and sphingolipid biosynthesis protein; Swiss-Prot: sp|A7S4N4|SERIC_NEMVE Probable serine incorporator; TrEMBL-Plants: tr|V7B3W7|V7B3W7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0587000 LjG1.1_chr1 112712558 112715988 +
3 domain predictions
1 GO term
LotjaGi1g1v0587000.2
n.a. Serine incorporator; TAIR: AT1G16180.1 Serinc-domain containing serine and sphingolipid biosynthesis protein; Swiss-Prot: sp|A7S4N4|SERIC_NEMVE Probable serine incorporator; TrEMBL-Plants: tr|V7B3W7|V7B3W7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0587000 LjG1.1_chr1 112712563 112717018 +
3 domain predictions
1 GO term
LotjaGi2g1v0213200.1
n.a. Serine incorporator; TAIR: AT3G24460.1 Serinc-domain containing serine and sphingolipid biosynthesis protein; Swiss-Prot: sp|Q7TNK0|SERC1_RAT Serine incorporator 1; TrEMBL-Plants: tr|G7KNG0|G7KNG0_MEDTR Serinc-domain serine and sphingolipid biosynthesis protein; Found in the gene: LotjaGi2g1v0213200 LjG1.1_chr2 66186947 66195562 -
3 domain predictions
1 GO term
LotjaGi2g1v0213200.2
n.a. Serine incorporator; TAIR: AT3G24460.1 Serinc-domain containing serine and sphingolipid biosynthesis protein; Swiss-Prot: sp|A7S4N4|SERIC_NEMVE Probable serine incorporator; TrEMBL-Plants: tr|G7KNG0|G7KNG0_MEDTR Serinc-domain serine and sphingolipid biosynthesis protein; Found in the gene: LotjaGi2g1v0213200 LjG1.1_chr2 66187808 66189977 -
3 domain predictions
1 GO term
LotjaGi4g1v0450600.1
n.a. Serine incorporator; TAIR: AT3G24460.1 Serinc-domain containing serine and sphingolipid biosynthesis protein; Swiss-Prot: sp|Q13530|SERC3_HUMAN Serine incorporator 3; TrEMBL-Plants: tr|K7KRM5|K7KRM5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0450600 LjG1.1_chr4 82262512 82268993 +
3 domain predictions
1 GO term
LotjaGi4g1v0450600.2
n.a. Serine incorporator; TAIR: AT3G24460.1 Serinc-domain containing serine and sphingolipid biosynthesis protein; Swiss-Prot: sp|Q13530|SERC3_HUMAN Serine incorporator 3; TrEMBL-Plants: tr|K7KRM5|K7KRM5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0450600 LjG1.1_chr4 82264014 82268329 +
3 domain predictions
1 GO term
LotjaGi4g1v0450600.3
n.a. Serine incorporator; TAIR: AT3G24460.1 Serinc-domain containing serine and sphingolipid biosynthesis protein; Swiss-Prot: sp|Q13530|SERC3_HUMAN Serine incorporator 3; TrEMBL-Plants: tr|K7KRM5|K7KRM5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0450600 LjG1.1_chr4 82265510 82268329 +
3 domain predictions
1 GO term
LotjaGi6g1v0011900.1
n.a. Serine incorporator; TAIR: AT2G33205.1 Serinc-domain containing serine and sphingolipid biosynthesis protein; Swiss-Prot: sp|Q54UF8|SERIC_DICDI Probable serine incorporator; TrEMBL-Plants: tr|I1NEJ3|I1NEJ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0011900 LjG1.1_chr6 2281541 2288742 +
3 domain predictions
1 GO term
LotjaGi6g1v0299300.1
n.a. Serine incorporator; TAIR: AT3G06170.1 Serinc-domain containing serine and sphingolipid biosynthesis protein; Swiss-Prot: sp|Q5R533|SERC3_PONAB Serine incorporator 3; TrEMBL-Plants: tr|A0A0L9VEK5|A0A0L9VEK5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0299300 LjG1.1_chr6 61717978 61723624 +
3 domain predictions
1 GO term
LotjaGi6g1v0299300.2
n.a. Serine incorporator; TAIR: AT3G06170.1 Serinc-domain containing serine and sphingolipid biosynthesis protein; Swiss-Prot: sp|A7S4N4|SERIC_NEMVE Probable serine incorporator; TrEMBL-Plants: tr|I3T4C3|I3T4C3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0299300 LjG1.1_chr6 61718202 61723124 +
3 domain predictions
1 GO term