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Lj6g3v1887740.1

Overview

Field Value
Gene ID Lj6g3v1887740
Transcript ID Lj6g3v1887740.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: guanylate kinase-like isoform X1 [Cicer arietinum] gi|502078966|ref|XP_004486110.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23117:SF12
53 286 234 5.30E-161 –
PANTHER
PTHR23117
53 286 234 5.30E-161 –
Gene3D
G3DSA:3.40.50.300
92 116 25 1.30E-31
IPR027417
SUPERFAMILY
SSF52540
92 280 189 1.91E-51
IPR027417
SMART
SM00072
93 278 186 8.00E-40
IPR008145
ProSiteProfiles
PS50052
94 275 182 30.55
IPR008144
CDD
cd00071
96 212 117 5.04E-47 –
Pfam
PF00625
96 276 181 2.70E-39
IPR008145
TIGRFAM
TIGR03263
96 275 180 8.50E-56
IPR017665
Gene3D
G3DSA:3.30.63.10
123 175 53 1.80E-21 –
ProSitePatterns
PS00856
128 145 18 –
IPR020590
Gene3D
G3DSA:3.40.50.300
176 283 108 1.30E-31
IPR027417

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004385
Molecular function Guanylate kinase activity Catalysis of the reaction: ATP + GMP = ADP + GDP.
Subterm of
GO:0006163
Biological process Purine nucleotide metabolic process The chemical reactions and pathways involving a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj6g3v1887740.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1887740.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.