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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1900330 |
| Transcript ID | Lj6g3v1900330.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: F-box/LRR-repeat protein 4-like [Cicer arietinum] gi|502078921|ref|XP_004486096.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 226 | 223 | 5.70E-216 | – | |
| PANTHER | 4 | 226 | 223 | 5.70E-216 | – | |
| ProSiteProfiles | 5 | 52 | 48 | 9.63 | ||
| Gene3D | 9 | 42 | 34 | 3.80E-08 | – | |
| SUPERFAMILY | 10 | 49 | 40 | 8.37E-08 | ||
| Pfam | 11 | 42 | 32 | 1.70E-07 | ||
| SMART | 11 | 52 | 42 | 1.10E-04 | ||
| SUPERFAMILY | 123 | 219 | 97 | 9.42E-12 | – | |
| Gene3D | 128 | 284 | 157 | 1.30E-13 | ||
| SMART | 139 | 164 | 26 | 0.032 | ||
| Pfam | 165 | 185 | 21 | 0.19 | ||
| SMART | 165 | 189 | 25 | 9.1 | ||
| Pfam | 190 | 213 | 24 | 0.084 | ||
| SMART | 190 | 215 | 26 | 6.00E-06 | ||
| SMART | 217 | 242 | 26 | 12 | ||
| SMART | 243 | 267 | 25 | 14 | ||
| SUPERFAMILY | 268 | 583 | 316 | 8.30E-48 | – | |
| SMART | 268 | 292 | 25 | 3.4 | ||
| SMART | 293 | 318 | 26 | 0.012 | ||
| PANTHER | 293 | 545 | 253 | 5.70E-216 | – | |
| PANTHER | 293 | 545 | 253 | 5.70E-216 | – | |
| Gene3D | 295 | 569 | 275 | 4.70E-61 | ||
| SMART | 319 | 344 | 26 | 2.30E-04 | ||
| Pfam | 319 | 342 | 24 | 0.61 | ||
| SMART | 345 | 370 | 26 | 0.85 | ||
| SMART | 371 | 396 | 26 | 0.11 | ||
| SMART | 397 | 422 | 26 | 2.30E-04 | ||
| SMART | 423 | 448 | 26 | 0.0087 | ||
| Pfam | 423 | 445 | 23 | 1.1 | ||
| Pfam | 448 | 471 | 24 | 0.018 | ||
| SMART | 449 | 474 | 26 | 0.0011 | ||
| SMART | 475 | 499 | 25 | 0.022 | ||
| Pfam | 475 | 497 | 23 | 9.60E-04 | ||
| SMART | 500 | 525 | 26 | 18 | ||
| SMART | 526 | 551 | 26 | 5.60E-06 | ||
| SMART | 552 | 577 | 26 | 4.1 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v1900330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1900330.1, powered by CORGI.
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