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Lj6g3v1915770.1

Overview

Field Value
Gene ID Lj6g3v1915770
Transcript ID Lj6g3v1915770.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase EDR1-like [Cicer arietinum] gi|502080374|ref|XP_004486543.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23257:SF485
1 367 367 1.30E-260 –
PANTHER
PTHR23257
1 367 367 1.30E-260 –
MobiDBLite
mobidb-lite
1 63 63 – –
Gene3D
G3DSA:3.30.200.20
84 168 85 1.80E-25 –
SUPERFAMILY
SSF56112
93 358 266 2.16E-85
IPR011009
ProSiteProfiles
PS50011
106 361 256 43.622
IPR000719
SMART
SM00220
106 366 261 8.60E-61
IPR000719
Pfam
PF07714
106 358 253 2.30E-67
IPR001245
CDD
cd13999
112 358 247 5.45E-133 –
Gene3D
G3DSA:1.10.510.10
169 358 190 6.00E-59 –
PRINTS
PR00109
180 193 14 3.90E-13
IPR001245
PRINTS
PR00109
219 237 19 3.90E-13
IPR001245
ProSitePatterns
PS00108
225 237 13 –
IPR008271
PRINTS
PR00109
266 276 11 3.90E-13
IPR001245
PRINTS
PR00109
285 307 23 3.90E-13
IPR001245
PRINTS
PR00109
329 351 23 3.90E-13
IPR001245

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 20

Expression data

Expression pattern

Expression pattern of Lj6g3v1915770.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1915770.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.