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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2041890 |
| Transcript ID | Lj6g3v2041890.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: callose synthase 11-like isoform X1 [Cicer arietinum] gi|502077901|ref|XP_004485779.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 310 | 310 | – | – | |
| PANTHER | 28 | 1022 | 995 | 0 | – | |
| PANTHER | 28 | 1022 | 995 | 0 | – | |
| SMART | 159 | 275 | 117 | 8.90E-63 | ||
| Pfam | 161 | 273 | 113 | 4.10E-35 | ||
| TMHMM | 308 | 327 | 20 | – | – | |
| Phobius | 311 | 327 | 17 | – | – | |
| Phobius | 328 | 346 | 19 | – | – | |
| Phobius | 347 | 363 | 17 | – | – | |
| Phobius | 364 | 383 | 20 | – | – | |
| TMHMM | 383 | 405 | 23 | – | – | |
| Phobius | 384 | 404 | 21 | – | – | |
| Phobius | 405 | 423 | 19 | – | – | |
| Phobius | 424 | 447 | 24 | – | – | |
| TMHMM | 425 | 447 | 23 | – | – | |
| Phobius | 448 | 458 | 11 | – | – | |
| TMHMM | 457 | 474 | 18 | – | – | |
| Phobius | 459 | 477 | 19 | – | – | |
| Phobius | 478 | 488 | 11 | – | – | |
| TMHMM | 487 | 507 | 21 | – | – | |
| Phobius | 489 | 506 | 18 | – | – | |
| Phobius | 507 | 526 | 20 | – | – | |
| TMHMM | 527 | 549 | 23 | – | – | |
| Phobius | 527 | 550 | 24 | – | – | |
| Phobius | 551 | 555 | 5 | – | – | |
| TMHMM | 556 | 578 | 23 | – | – | |
| Phobius | 556 | 575 | 20 | – | – | |
| Phobius | 576 | 1346 | 771 | – | – | |
| Pfam | 877 | 1676 | 800 | 1.80E-266 | ||
| MobiDBLite | 1022 | 1049 | 28 | – | – | |
| PANTHER | 1060 | 1776 | 717 | 0 | – | |
| PANTHER | 1060 | 1776 | 717 | 0 | – | |
| TMHMM | 1347 | 1369 | 23 | – | – | |
| Phobius | 1347 | 1371 | 25 | – | – | |
| Phobius | 1372 | 1390 | 19 | – | – | |
| TMHMM | 1390 | 1412 | 23 | – | – | |
| Phobius | 1391 | 1412 | 22 | – | – | |
| Phobius | 1413 | 1423 | 11 | – | – | |
| Phobius | 1424 | 1445 | 22 | – | – | |
| TMHMM | 1427 | 1449 | 23 | – | – | |
| Phobius | 1446 | 1489 | 44 | – | – | |
| TMHMM | 1489 | 1511 | 23 | – | – | |
| Phobius | 1490 | 1507 | 18 | – | – | |
| Phobius | 1508 | 1513 | 6 | – | – | |
| Phobius | 1514 | 1538 | 25 | – | – | |
| TMHMM | 1516 | 1538 | 23 | – | – | |
| Phobius | 1539 | 1588 | 50 | – | – | |
| Phobius | 1589 | 1610 | 22 | – | – | |
| Phobius | 1611 | 1621 | 11 | – | – | |
| Phobius | 1622 | 1644 | 23 | – | – | |
| TMHMM | 1622 | 1644 | 23 | – | – | |
| Phobius | 1645 | 1655 | 11 | – | – | |
| Phobius | 1656 | 1676 | 21 | – | – | |
| TMHMM | 1659 | 1681 | 23 | – | – | |
| Phobius | 1677 | 1682 | 6 | – | – | |
| Phobius | 1683 | 1706 | 24 | – | – | |
| TMHMM | 1686 | 1708 | 23 | – | – | |
| Phobius | 1707 | 1725 | 19 | – | – | |
| TMHMM | 1723 | 1745 | 23 | – | – | |
| Phobius | 1726 | 1745 | 20 | – | – | |
| Phobius | 1746 | 1777 | 32 | – | – | |
| Coils | 1774 | 1777 | 4 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | 1,3-beta-D-glucan synthase complex | A protein complex that catalyzes the transfer of a glucose group from UDP-glucose to a (1->3)-beta-D-glucan chain. | ||
| Molecular function | 1,3-beta-D-glucan synthase activity | Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + [(1->3)-beta-D-glucosyl](n+1). | ||
| Biological process | (1->3)-beta-D-glucan biosynthetic process | The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj6g3v2041890.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2041890.1, powered by CORGI.
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