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Lj6g3v2218330.1

Overview

Field Value
Gene ID Lj6g3v2218330
Transcript ID Lj6g3v2218330.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: potassium transporter 7-like [Cicer arietinum] gi|502077175|ref|XP_004485577.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 103 103
MobiDBLite 1 31 31
PANTHER 62 852 791 0
PANTHER 62 852 791 0
TMHMM 104 126 23
Phobius 104 124 21
TIGRFAM 106 851 746 2.00E-222
Pfam 107 680 574 7.60E-168
Phobius 125 143 19
TMHMM 141 163 23
Phobius 144 167 24
Phobius 168 231 64
Phobius 232 250 19
TMHMM 232 254 23
Phobius 251 269 19
Phobius 270 289 20
Phobius 290 300 11
TMHMM 299 321 23
Phobius 301 321 21
Phobius 322 346 25
TMHMM 347 366 20
Phobius 347 366 20
Phobius 367 377 11
TMHMM 376 398 23
Phobius 378 398 21
Phobius 399 417 19
TMHMM 410 432 23
Phobius 418 437 20
Phobius 438 473 36
TMHMM 466 488 23
Phobius 474 493 20
Phobius 494 498 5
Phobius 499 522 24
TMHMM 501 523 23
Phobius 523 528 6
TMHMM 527 549 23
Phobius 529 550 22
Phobius 551 555 5
TMHMM 556 573 18
Phobius 556 576 21
Phobius 577 596 20
Phobius 597 614 18
Phobius 615 619 5
TMHMM 619 641 23
Phobius 620 646 27
Phobius 647 852 206

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Potassium ion transmembrane transporter activity Enables the transfer of potassium ions (K+) from one side of a membrane to the other.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Biological process Potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of Lj6g3v2218330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v2218330.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.