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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2272060 |
| Transcript ID | Lj6g3v2272060.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Transmembrane emp24 domain-containing protein [Medicago truncatula] gi|357445539|ref|XP_003593047.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 8 | 18 | 11 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| SMART | 23 | 206 | 184 | 1.70E-59 | ||
| PANTHER | 23 | 211 | 189 | 3.30E-100 | – | |
| PANTHER | 23 | 211 | 189 | 3.30E-100 | ||
| Phobius | 24 | 178 | 155 | – | – | |
| Pfam | 24 | 206 | 183 | 1.20E-46 | ||
| ProSiteProfiles | 33 | 146 | 114 | 12.806 | ||
| Phobius | 179 | 199 | 21 | – | – | |
| TMHMM | 179 | 201 | 23 | – | – | |
| Phobius | 200 | 211 | 12 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj6g3v2272060.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2272060.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.