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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2273280 |
| Transcript ID | Lj6g3v2273280.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic-like [Glycine max] gi|356525958|ref|XP_003531588.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| ProSiteProfiles | 1 | 18 | 18 | 5 | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| PANTHER | 5 | 181 | 177 | 6.90E-49 | – | |
| PANTHER | 5 | 181 | 177 | 6.90E-49 | – | |
| Phobius | 10 | 21 | 12 | – | – | |
| Phobius | 22 | 28 | 7 | – | – | |
| Phobius | 29 | 184 | 156 | – | – | |
| ProSiteProfiles | 70 | 100 | 31 | 5.349 | ||
| ProSiteProfiles | 139 | 173 | 35 | 12.584 | ||
| Pfam | 139 | 181 | 43 | 1.90E-12 | ||
| TIGRFAM | 141 | 175 | 35 | 1.10E-09 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj6g3v2273280.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2273280.2, powered by CORGI.
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