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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2275090 |
| Transcript ID | Lj6g3v2275090.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Bromodomain-containing protein [Medicago truncatula] gi|357445295|ref|XP_003592925.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 90 | 90 | – | – | |
| PANTHER | 88 | 300 | 213 | 7.10E-108 | – | |
| PANTHER | 88 | 300 | 213 | 7.10E-108 | – | |
| SUPERFAMILY | 107 | 217 | 111 | 1.57E-28 | ||
| Gene3D | 107 | 226 | 120 | 7.30E-29 | ||
| SMART | 110 | 221 | 112 | 1.90E-18 | ||
| CDD | 114 | 216 | 103 | 4.12E-24 | – | |
| Pfam | 123 | 205 | 83 | 2.20E-16 | ||
| ProSiteProfiles | 129 | 202 | 74 | 17.563 | ||
| PRINTS | 132 | 145 | 14 | 3.40E-11 | ||
| ProSitePatterns | 134 | 194 | 61 | – | ||
| PRINTS | 148 | 164 | 17 | 3.40E-11 | ||
| PRINTS | 183 | 202 | 20 | 3.40E-11 | ||
| MobiDBLite | 226 | 260 | 35 | – | – | |
| MobiDBLite | 281 | 398 | 118 | – | – | |
| PANTHER | 357 | 404 | 48 | 7.10E-108 | – | |
| PANTHER | 357 | 404 | 48 | 7.10E-108 | – | |
| Coils | 377 | 399 | 23 | – | – | |
| MobiDBLite | 432 | 451 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v2275090.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2275090.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.