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| Field | Value |
|---|---|
| Gene ID | LotjaGi0g1v0002200 |
| Transcript ID | LotjaGi0g1v0002200.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine synthase; TAIR: AT2G36880.1 methionine adenosyltransferase 3; Swiss-Prot: sp|Q6SYB9|METK2_TOBAC S-adenosylmethionine synthase 2; TrEMBL-Plants: tr|A0A0L9TX93|A0A0L9TX93_PHAAN S-adenosylmethionine synthase; Found in the gene: LotjaGi0g1v0002200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr0:1949126..1950861) extracted from Lotus japonicus Gifu genome v1.2.
TTACTGCCTTCATTAGACAACCCCTATCTTAAATCGTTTGCTTCTATTCAAATCAATTAAAGTAACATTTTTTTTCATGA ACAGAGATGGAAACCTTTCTGTTCACCTCAGAATCTGTAAACGAAGGCCATCCAGACAAGATCTGTGACCAGGTTTCCGA CGCCATCCTCGATGCGTGCTTGGAGCAGGACCCAGAGAGCAAGGTAGCCTGCGAGACATGCACAAAAACCAACATGGTTA TGGTCTTTGGCGAGATCACAACCAAGGCGAAGGTGAACTACGAGAAGATCGTCCGAGACACATGTAGGGGAATTGGGTTC GTCTCCGCTGATGTCGGTCTCGACGCTGACAAGTGCAACGTCCTTGTCAACATTGAGCAGCAGAGCCCTGACATTGCCCA AGGAGTTCACGGTCACTTGACCAAGAAGCCAGAGGAAATTGGAGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAG ATGAAACAGCTGAACTGATGCCACTCACTCATGTGCTTGCTACGAAGCTCGGTGCTAAGCTCACTGAAGTGAGGAAGAAC AAGACATGCCCGTGGTTGAGGCCTGATGGGAAGACCCAAGTGACTGTTGAGTACAAGAATGATAATGGAGCCATGATTCC AATTCGTGTGCACACGGTTCTCATCTCAACTCAGCATGATGAAACTGTGACTAATGATCAGATTGCCAAAGACTTGAAAG AGCATGTGATTACACCTGTGATCCCAGCTGAATACCTTGATGACAAGACTATCTTCCACCTTAACCCTTCAGGTACAGAT CAATCTAGGTGCTATAAAAATGTGGCATTAGCCCCCAAGAGAAGTTTTTTTTTTTTAATAAAGGAGTATTCAAATATTTG TACGTTTTAGGAGTGGTAATGTTAATGCGGGCTAACTCACCTCATCCGGCTTTCAGCCAGCTTAAAGCGGGTTGAGTCAA GTTGACCTACCAATGAATATGGGTTCAAAATGCCAACTCGTCCCACATATTTGGTGGTTTGGCGAGTTGCGAGTAAAAGA TATAAAAGACAATAATAATATGTGGATTAGGAGGGCGGGATAAGCGGGCTCGCGAGCTGAATTTTTTAACTCGCCTGGCG GGTTAACCAGATTGGCTCGGCGAGCTAAACCCACATTGTCACGCCTAGTATTTTTACAATGTCTTTTTTAATTTATCATT GTTAATTTTGCTTAATATGTTTATTTCATCCCGGATTCATTTTTTCTGGTTCTGTCCATTTACAGGTAGGTTTGTGATTG GTGGGCCCCATGGAGATGCAGGGCTCACAGGCCGCAAGATCATTATCGATACCTATGGAGGGTGGGGTGCTCATGGTGGA GGTGCCTTCTCAGGCAAGGACCCAACCAAGGTTGATAGAAGTGGTGCATACATTGTTAGGCAGGCTGCAAAAAGTGTAGT AGCTTCAGGGCTTGCACGTCGTTGCATTGTGCAGGTTTCTTATGCAATTGGAGTGCCAGAGCCACTGTCTGTGTTTGTGG ACACCTACAAAACAGGGAAGATTCCAGACAATGATATTTTGGGTCTGATTAAGGAGAATTTTGATTTCAGGCCTGGAATG ATTTCCATCAATCTTGACCTCCAAAGAGGAGGAAACTTCAGGTACCAGAAAACTGCTGCTTATGGCCATTTTGGACGAGA TGATTCTGATTTCACATGGGAGACTGTGAAAATGCTCAAGCCCAAGGCTTGATTGA
CDS sequence (LotjaGi0g1v0002200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACCTTTCTGTTCACCTCAGAATCTGTAAACGAAGGCCATCCAGACAAGATCTGTGACCAGGTTTCCGACGCCAT CCTCGATGCGTGCTTGGAGCAGGACCCAGAGAGCAAGGTAGCCTGCGAGACATGCACAAAAACCAACATGGTTATGGTCT TTGGCGAGATCACAACCAAGGCGAAGGTGAACTACGAGAAGATCGTCCGAGACACATGTAGGGGAATTGGGTTCGTCTCC GCTGATGTCGGTCTCGACGCTGACAAGTGCAACGTCCTTGTCAACATTGAGCAGCAGAGCCCTGACATTGCCCAAGGAGT TCACGGTCACTTGACCAAGAAGCCAGAGGAAATTGGAGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAGATGAAA CAGCTGAACTGATGCCACTCACTCATGTGCTTGCTACGAAGCTCGGTGCTAAGCTCACTGAAGTGAGGAAGAACAAGACA TGCCCGTGGTTGAGGCCTGATGGGAAGACCCAAGTGACTGTTGAGTACAAGAATGATAATGGAGCCATGATTCCAATTCG TGTGCACACGGTTCTCATCTCAACTCAGCATGATGAAACTGTGACTAATGATCAGATTGCCAAAGACTTGAAAGAGCATG TGATTACACCTGTGATCCCAGCTGAATACCTTGATGACAAGACTATCTTCCACCTTAACCCTTCAGGTAGGTTTGTGATT GGTGGGCCCCATGGAGATGCAGGGCTCACAGGCCGCAAGATCATTATCGATACCTATGGAGGGTGGGGTGCTCATGGTGG AGGTGCCTTCTCAGGCAAGGACCCAACCAAGGTTGATAGAAGTGGTGCATACATTGTTAGGCAGGCTGCAAAAAGTGTAG TAGCTTCAGGGCTTGCACGTCGTTGCATTGTGCAGGTTTCTTATGCAATTGGAGTGCCAGAGCCACTGTCTGTGTTTGTG GACACCTACAAAACAGGGAAGATTCCAGACAATGATATTTTGGGTCTGATTAAGGAGAATTTTGATTTCAGGCCTGGAAT GATTTCCATCAATCTTGACCTCCAAAGAGGAGGAAACTTCAGGTACCAGAAAACTGCTGCTTATGGCCATTTTGGACGAG ATGATTCTGATTTCACATGGGAGACTGTGAAAATGCTCAAGCCCAAGGCTTGA
Protein sequence (LotjaGi0g1v0002200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METFLFTSESVNEGHPDKICDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVS ADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETAELMPLTHVLATKLGAKLTEVRKNKT CPWLRPDGKTQVTVEYKNDNGAMIPIRVHTVLISTQHDETVTNDQIAKDLKEHVITPVIPAEYLDDKTIFHLNPSGRFVI GGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFV DTYKTGKIPDNDILGLIKENFDFRPGMISINLDLQRGGNFRYQKTAAYGHFGRDDSDFTWETVKMLKPKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 390 | 390 | 7.9E-164 | ||
| PANTHER | 1 | 390 | 390 | 7.7E-274 | – | |
| PANTHER | 1 | 390 | 390 | 7.7E-274 | ||
| Hamap | 2 | 390 | 389 | 49.586 | ||
| SUPERFAMILY | 3 | 109 | 107 | 5.1E-47 | ||
| Pfam | 4 | 101 | 98 | 1.3E-42 | ||
| Gene3D | 5 | 240 | 236 | 1.0E-171 | – | |
| TIGRFAM | 5 | 387 | 383 | 2.0E-166 | ||
| CDD | 5 | 384 | 380 | 0.0 | – | |
| Gene3D | 11 | 277 | 267 | 1.0E-171 | – | |
| Gene3D | 102 | 383 | 282 | 1.0E-171 | – | |
| SUPERFAMILY | 115 | 239 | 125 | 9.42E-53 | ||
| Pfam | 117 | 238 | 122 | 2.3E-47 | ||
| ProSitePatterns | 119 | 129 | 11 | - | ||
| Pfam | 240 | 381 | 142 | 1.3E-61 | ||
| SUPERFAMILY | 240 | 387 | 148 | 3.85E-61 | ||
| ProSitePatterns | 266 | 274 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methionine adenosyltransferase activity | Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | S-adenosylmethionine biosynthetic process | The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism. |
Expression pattern of LotjaGi0g1v0002200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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