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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0000800 |
| Transcript ID | LotjaGi1g1v0000800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent protein kinase; TAIR: AT2G17290.1 Calcium-dependent protein kinase family protein; Swiss-Prot: sp|A5A7I7|CDPK4_SOLTU Calcium-dependent protein kinase 4; TrEMBL-Plants: tr|A0A1D6Y9B6|A0A1D6Y9B6_9FABA Calcium phosphate kinase 6; Found in the gene: LotjaGi1g1v0000800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:348636..351914) extracted from Lotus japonicus Gifu genome v1.2.
ATTCCAATCCAGAAAACATCGATACAAATAATAATAGTAACAACAACAACAACAACAACAACAACAAACCCTTCAATCTC AAGAAAGAAGCCATCATGCGTCGCGGCCTCGATAACCAATCATATTATGTCTTGGGTCATAAGACTCCCAACATTCGTGA TCTCTACACTCTTGGCCGTAAATTGGGACAGGGACAATTTGGCACCACTTATTTATGCACTGACAATTCCACCTCCATTG AATATGCTTGCAAATCCATCTCTAAGAGGAAGTTGATTTCCAAGGAGGATGTTGAGGACGTTAGAAGGGAAATTCAGATC ATGCATCATTTAGCTGGTCATAACAACATTGTCACCATCAAGGGTGCTTATGAGGATCCCCTCTATGTTCATATTGTCAT GGAGCTTTGTTCTGGGGGTGAGTTGTTTGATCGCATCATCCAGAGGGGCCACTATTCCGAAAGGAAGGCTGCCGAGTTGA CCAAAATTATTGTTGGAGTTGTTGAGGCTTGTCATTCCCTTGGGGTTATGCATAGAGATCTCAAGCCTGAAAACTTTTTG CTCGTCAATAAAGATGATGATTTCTCTCTTAAAGCCATTGACTTTGGCCTCTCTGTTTTCTTCAAACCAGGTAACAACCA ACCATTCCTTACTCTTGTATTTCTGCTTGCCTTTTAAGAACAACATTACTTCCTTTTTTTTTAGTAAAAATTACATATTT TTGTAACTTGGCCACACTTATATGTTATAAATGCATGATTTTTGTCTTCTTTAATGCTTCTAAATATGCACAAATCCGAA CATGCTGCTGTCTTTCAATAACAATTTATTATCACACTTCTCTTGAACTAGTAGTTATTAACTAGAGAACCCCGTTCCCG TACTAATTATAGTTTGTTTAAATCTTCATTTTATCTTACTGCCTCAGGTCAAGTTTTCACTGATGTAGTTGGCAGCCCGT ACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTACGGGCCCGAAGCTGATGTGTGGACTGCGGGTGTCATACTGTACATA TTGCTGAGTGGCGTGCCTCCATTTTGGGCAGGTATATATCACTGCCAACACTCTTAAAAAAATTCTGTCTATCATCTGTG GCATCACTGAAACTTTTGTTCTTTTGGAGTTCAGAAACCCAGCAGGGTATATTTGATGCAGTATTGAAGGGACATATAGA TTTTGACTCAGATCCATGGCCTCTAATATCTGATAGTGCAAAAGATTTGATTAGAAAGATGTTGTGCTCTCGGCCTTCAG AACGGTTAACTGCTCATGAAGTCTTGTGTAAGTTCATCCTTTTCTCTACTATACTTGCTATATACAAGGTCCATCCATTC CTGATATGAATAAAAGAGATACTGTTTCCTTTTGAAGTTTTAACTTGTCACTCAGTGGATGTTATTTGGTGTAGTAGAGG GGCTGGTCGTCAGAAGTTAGCTTTTCCTGTGGTATTCACTCTTCCAAAATTTTGTTCAGATGCAATAGGTGATTAAAGTC TCAATGCCATTGCCTCATTATAGCAGGACTTACATAGGAAGAACCAGGCTTGTTAATAGCGCGCCATAGTGGCGCAATAG CGCTTTAGCGTAGCGCCCTGGGGGTTCACTGCTACTCCAGTATTCACCGCTATAGCGCGGCAATAGCGAAATAGCGTTTT TTGGGCTTGCGGCTAAACTACGCTATCTGCCATTAACAACCCTGGGAAGAACTAGTTAGATATATGGAGGTTGATGCCTC CTCAAAAGCAAATTCCAATGTTTAAAATGAGCACAATATTTTTGTCATCTTTTTTCAAGAGAGGAAGCGAATACATTTTG CAAATATCAGAATACTGTGTTTCAATGCAATTTTTTTGCATTATTATATAATTTTATATAGTTTTATTTCAAAATTCAAA AGACATTATTCTCTGTGCTTGTTTAGGTCATCCTTGGATATGTGAAAATGGAGTTGCCCCTGACAGAGCACTAGACCCTG CTGTTCTTTCCCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCTTTACGGGTAAATAAAGTTATTTGA TGCATGGACATTAGTTTATTTATGAATTTCGCTCATTCATTGTGATGAAAAAGATATTACATTCTCATGCATGATATATA AGAGGGGCTATTGTTGCCTTTGTGGCAACACACTTTTTTACACTTCTTGACTGCCAACTGAAGTTGGGCTTCTGCACTTT CTATTCCGTTTCATCTATTATATTCTTGTTTCATCAAAACTAGGTAACTTTAGTTATAGTTGGTCGTTATAATTGCTTGT TATGCTATTTTTTTAGGTAATTGCTGAAAGTCTATCCGAAGAGGAGATAGCTGGTTTGAGAGAAATGTTTACATCTATGG ATACTGATAATAGCGGTGCAATCACTTTTGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATATA GAAATACGTGATCTTATGGAAGCGGTACGGTGTTAGTTCTGTGAAAAGTATCTTTCTGTATGCTGTGTATGAACTTCCAT CCTTTATTCTTCTTTTTCTTTTTTGCAAAATAAGCTTTTGATTTTTCTTAAATATTTCCTCTATATAAATTTGTATTGTA TTCTTTGTCATTCACTCTGTTGCATGATTATTCTTCAATCTTCATTACACATTGAGTACATAATTTAATGATCAGGTGCT TTCAAAAAAAAAAAAAATTTAATGATCAGGCCAATGGATCATTGCTTATTTAGACTTTTGAACTTTAGATGACTTAAGGT TCAAAAATCTTTCATGAATTTTAAGACATCAGCAACAGCAACTTGCGTTCATGTTAAATGATATTTGATTGTCTTCCATT AATTGAATTTTGCCTTATCAAAAAAAAAATCCAGCTGAACTGTTTAATCTGTTCCAGGCTGATGTAGACAATAGCGGAAC CATAGATTATGGGGAGTTTATTGCTGCAACAGTTCATCTCAACAAACTTGAGCGTGAGGAACATCTCATTGCAGCATTCC AATATTTTGACAAGGACGGGAGTGGTTATATTACAGTTGATGAACTCCAACAAGCTTGTGCAGAACATAACATGACTGAT GTCTTTCTTGAAGATATTATTAGGGAAGTTGATCAAGATAATGTAAGTCACTTCTGCTCCTCATTCACATAGGACATCCA TGTAGGCTGTTAGAAGTTACTTTTAGAAGATCTTACTGTTTAAGTGTTTAGTATTATATATAATTATATATCCTCCTGA
CDS sequence (LotjaGi1g1v0000800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTCGCGGCCTCGATAACCAATCATATTATGTCTTGGGTCATAAGACTCCCAACATTCGTGATCTCTACACTCTTGG CCGTAAATTGGGACAGGGACAATTTGGCACCACTTATTTATGCACTGACAATTCCACCTCCATTGAATATGCTTGCAAAT CCATCTCTAAGAGGAAGTTGATTTCCAAGGAGGATGTTGAGGACGTTAGAAGGGAAATTCAGATCATGCATCATTTAGCT GGTCATAACAACATTGTCACCATCAAGGGTGCTTATGAGGATCCCCTCTATGTTCATATTGTCATGGAGCTTTGTTCTGG GGGTGAGTTGTTTGATCGCATCATCCAGAGGGGCCACTATTCCGAAAGGAAGGCTGCCGAGTTGACCAAAATTATTGTTG GAGTTGTTGAGGCTTGTCATTCCCTTGGGGTTATGCATAGAGATCTCAAGCCTGAAAACTTTTTGCTCGTCAATAAAGAT GATGATTTCTCTCTTAAAGCCATTGACTTTGGCCTCTCTGTTTTCTTCAAACCAGGTCAAGTTTTCACTGATGTAGTTGG CAGCCCGTACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTACGGGCCCGAAGCTGATGTGTGGACTGCGGGTGTCATAC TGTACATATTGCTGAGTGGCGTGCCTCCATTTTGGGCAGAAACCCAGCAGGGTATATTTGATGCAGTATTGAAGGGACAT ATAGATTTTGACTCAGATCCATGGCCTCTAATATCTGATAGTGCAAAAGATTTGATTAGAAAGATGTTGTGCTCTCGGCC TTCAGAACGGTTAACTGCTCATGAAGTCTTGTGTCATCCTTGGATATGTGAAAATGGAGTTGCCCCTGACAGAGCACTAG ACCCTGCTGTTCTTTCCCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCTTTACGGGTAATTGCTGAA AGTCTATCCGAAGAGGAGATAGCTGGTTTGAGAGAAATGTTTACATCTATGGATACTGATAATAGCGGTGCAATCACTTT TGATGAACTCAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATATAGAAATACGTGATCTTATGGAAGCGGCTG ATGTAGACAATAGCGGAACCATAGATTATGGGGAGTTTATTGCTGCAACAGTTCATCTCAACAAACTTGAGCGTGAGGAA CATCTCATTGCAGCATTCCAATATTTTGACAAGGACGGGAGTGGTTATATTACAGTTGATGAACTCCAACAAGCTTGTGC AGAACATAACATGACTGATGTCTTTCTTGAAGATATTATTAGGGAAGTTGATCAAGATAATGTAAGTCACTTCTGCTCCT CATTCACATAG
Protein sequence (LotjaGi1g1v0000800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRRGLDNQSYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTDNSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLA GHNNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKD DDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGH IDFDSDPWPLISDSAKDLIRKMLCSRPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAE SLSEEEIAGLREMFTSMDTDNSGAITFDELKAGLRRYGSTLKDIEIRDLMEAADVDNSGTIDYGEFIAATVHLNKLEREE HLIAAFQYFDKDGSGYITVDELQQACAEHNMTDVFLEDIIREVDQDNVSHFCSSFT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 447 | 442 | 0.0 | – | |
| PANTHER | 6 | 447 | 442 | 0.0 | – | |
| SUPERFAMILY | 10 | 307 | 298 | 1.24E-84 | ||
| Gene3D | 24 | 107 | 84 | 5.6E-154 | – | |
| CDD | 24 | 281 | 258 | 1.11939E-139 | – | |
| Pfam | 24 | 282 | 259 | 1.1E-72 | ||
| SMART | 24 | 282 | 259 | 5.6E-97 | ||
| ProSiteProfiles | 24 | 282 | 259 | 46.718 | ||
| ProSitePatterns | 30 | 53 | 24 | - | ||
| Gene3D | 108 | 285 | 178 | 5.6E-154 | – | |
| ProSitePatterns | 144 | 156 | 13 | - | ||
| Gene3D | 286 | 447 | 162 | 5.6E-154 | – | |
| SUPERFAMILY | 306 | 447 | 142 | 1.76E-38 | ||
| ProSiteProfiles | 325 | 360 | 36 | 14.346 | ||
| SMART | 329 | 357 | 29 | 9.6E-5 | ||
| Pfam | 330 | 390 | 61 | 3.8E-10 | ||
| ProSitePatterns | 338 | 350 | 13 | - | ||
| ProSiteProfiles | 361 | 396 | 36 | 10.831 | ||
| SMART | 365 | 393 | 29 | 0.001 | ||
| ProSitePatterns | 374 | 386 | 13 | - | ||
| ProSiteProfiles | 397 | 432 | 36 | 14.513 | ||
| SMART | 401 | 429 | 29 | 0.0015 | ||
| Pfam | 402 | 426 | 25 | 4.3E-7 | ||
| ProSitePatterns | 410 | 422 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0000800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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