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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0009500 |
| Transcript ID | LotjaGi1g1v0009500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-transporting ATPase; TAIR: AT3G22910.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; Swiss-Prot: sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type; TrEMBL-Plants: tr|G7KEN1|G7KEN1_MEDTR Cation-transporting ATPase plant; Found in the gene: LotjaGi1g1v0009500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1210308..1214641) extracted from Lotus japonicus Gifu genome v1.2.
GCCATATCAAAAATCTTATAGCTCACACTTCTTTGTTACCTTGAAATCACACTCTCACTAGTGCCTAAACCTTTCCTTTT GTTCTTGTTTGATCTTATAACCTTCTTCCTTAAATCCTTACCTATCCGAGTCTTAGTTTCACAATTAGCGTAGAATCTAA ACTATAGCATTATATGATAAATCCAAACATGTGTCTCTTAGATTTGGAATTATTGTCTCTTAGATTTGCTTTCCTTTTAA AGTAGGCCTCTCAACCTCCTCCCTCATCATTTTTTGAGTTATCAATTTCCTTTCAAAAGTGCCTCTTAGATTCCAACAAA CTTGGACTTGTTCAGCTTGACTTATCAAAAAGCAACTCCAATCAATCTAGTTCTTCCTGTCTCCTCCACCTTAATTACTG TCCAAGCAATCATGTCCTCAGCTGGTGATGATGATGATGCCAACATTGAACTTGGTGCTACCTTTCTCCTCACCACCACT AGCACTAGCAGAAACAGCAAGTACAGCAAGATATGGCGTAGAACCTCCTTAAACATAAGCTTCCTCATCTCTTTGAAGAA GTCAACATCTGCTAATGAGTCTCCTCCACCATCACCACTTTCTTCAGTGCCATACACCTCATTGTCTCCCTCTGAGCCTC CAGCTAGAACCTCCTCTTCCAAATCTTGTGTTGAAATTGATGTAGAGGAAGGAGAAGAAGATGCAGAAGAAGGGCACATT AGGAATGATATTGCAAGGATTGTGAAGGAGAAGGACTTGAAATCACTGAATGACCTTGGTGGGGTCAACCGTGTGTGTGA TGTTCTTCATGATCAACGCCGACACTCAGAGTCAGAGGTATCAACCTGCATATATAATTGGGATAATGGCCTTTTCTTCA ACAATTAAAGTTTTTTTAAAAAAAAGAACAAAGTCCTCAATTTCAGAAGCAAATCATTTAACTGTGAATATATTTCCTAA TTTGTCTTTGAGGTTTTGGACAAAGATATAATATTATGTTCACTCTTGTGTTATGTTGTTTGCCTCATTGAATATTTTCA AGTTTTGAAGATGCATTATGTTGATGGGATTTTGGTTTTATGCACAGGAGAGCTCTAGTGAGAATGAGGTCCTTGGTGTG TTGGGCTCCACAGTGCAAGTTCATGGAACAAGCTTCTCCAGGTTTTTGTTGATTAGCTTCAAACAGAACCGTTACACAAT TTCAATGCTATTGATTGCAGCTGGATTGACACTTGCCACAGGGTTCAAGCAAGAGGGAGCTAGATATGGTTGGCATGATG GTGTTGCTATAGTTTTTGCTGCTATGGTCCTGGTTGCATTCTCTTCAATAGCAAACTTCTGGCGTCAAAGAGAAATGATG AAATTGGCAAAGAGAAGGGGCAAGTTGGAATTCACAGTTCAAAGAGGTGAAGGATGCACAACAAAAGTTGCCATATCAGA CATTAAGGTCGGTGACAAGGTGCGTCTGGGGCAGAATGATGAGGTTCCAGCAGATGGTTTGCTTGTAAATGGTGACATCC TTGTGATGGAAGAGGCAACACAAAGCAAAAGAGATTGTGAGGGGAACCCATTTCTTGTAGCTGGTTCAAAGGTGCTTGAG GGTCATGGACTGATGCTTGTAGCATCAGTTGGATCTTTGGCTGAGATGCCAAGATCTATAGGTCTCAAAATGGGTCAGGC TCGACGGACAGACCCAAAAATGTGTTGGCTCGCTGCGGGCCGACACCAGCCGGAACTGACACCCCTACAGAGCTCAATGA GTTACAATTCTGAAAAGGGATGCTTGCTGGGGAGTCTAATTGAGAAGCCAATTTCATACATTGACAAAGCTTCTCTTCTT ATCTTCACCCTGGATGTGCTTGTAGTTTTCATTCGCCTAACTTGTAAGAAGGATGGAGATAGTAACGGGTTGCCGGAAAT TAAGGGGAATGTCTCACTTGGCATGGTGATGGAAGTCCTTGAGAAATTATTTTTGAGACCACCAGGAAGGATTTTCATCT TCACAGGTCTTTTCACTGTTGTGGTACTATGTGTGCAACATGGTGTGCCACTTATGGTTACTATGTCTCTCAATGACCAG ATTGATAAGGTAGAATCAGACCAAGATGATGCAGTTCTTCATGATTTATCAGCTTGTACAACAATGGGGTTGGTAACTGT CATCTGCATTGATGTATCAGGTGGGCTTATATCTAAACCAATGGAAGTTAGCAGAATATGGATGGGGGAGACAGAGATCA GCAACAAGGTTGAGGGATCAGAAACAGATCTAGTTGTGCTTGAAGTCCTTAAACAAGGAGTTGGTTTATCAATTCTTGCA CCTGAACTTTCTCTTTCTCCAATGTCCCGTTCACTTGTTTTTTGGGCAGAAACAGCATGGGAAATGAACATGAAATCTCT CACAGAAAATTTTGACATTCTTAACCACAGAAATTTGAGTTCTGACAAAGAAGGAAGTGGAGTTTTGGTGAGAAAAGCTG GGGCCAATGAACAAGCTCTGCACTTACACTGGAGTGGGGCTGCATCCACAATATTGGAAATGTGCTCACATTACTATGAT GGTGAAGGAGAATGTTGTTCCATGGAAAATCAGAAAATCAAATTTGGACAGGTGATTCAAGAGATGGAGGAGAGTGGCCT AAAACCAATTGCATTTGCTCATAGAGAAACACAGGTGGAAGAACTTGAGCAAGATGAATTGATCTTGATCGGATTGATAG GCCTCAAATACACATGCCAAGAATCAACAAAAGTAGCTTTGAAAAAACTCAGAGATACTAAAATAAAGATCAAATTGGTC TCAGGGGATGACATCATGTCAGTGAAAGATATAGCTTGTGATCTGGGACTAGGAATGGAAGAGATAGAAGGTGGACATGT TGAAGGCAAACAACTTCAAGATTTGCATTGCAAAGCTAGACTAGAGAAAGTGGATCAAGCCAATGTAATGGGAAGTTTCA GCCTTGAAGATAAGCTTGACATGGTGCAGTGCTTGCAAGAGAAAGGTCATGTAGTTGCATTCATTGGAAGAAATTTAAGT CATGCTTCAGTTCTCAAGGTAGCTGATGTAGGGATAGTTCATGATTCTCAGGGTAGAATAATGCACAGAGAGAGTTCTGG TATATCTATCAAATGTTTCAGTGCATTGAAACCAATTGTGAGGGCTGGCAGAAGTAAATATCTTAATATTCAGAAGTTCA TTCAACTTCAGCTTACATTCAACATCTCAGGGTTACTCATATCCTTCATGACAACCGTATCCACTGGAAATTCACCCCTA ACAGCAATTCAATTGATTTGGGTGAATGTGCTAATGTGCCTTCTAGGTTGCATCATGATGGTAATGGAGTTAAGCAGTGA GGAACAACTTGCAAATCCACCATCTAATAGGAATCAACCAATCATAACCATTGATATATGGAAAAACATAGTCATTCAAG TCTTTTATCAAGCATTTGCATGCATGGTACTTGAATTTGGAGGACATGTTAGTGACTGGGAAAAGAGAGTGAGGACAACC ATGATCTTCAACACATTCCTACTGTGCCAAATCTTCAATCAGCTCAACATCATGGGTTTGTTGAAAAGGGAAATTCTCAA GATTGTTGTTCTTCAGAGATACTTTTTTTTATTCTTGGTGGGCTTAGGTGGTTGTTTCCTTGTGCAAGTGTTGGTGATTG AGTATGCAAAAGGCCTAGCAGATGGCATGGGCTTGAATGCTACTCAATGGGCTATATGTATCCTGGTTGGTGCTCTTTCA TGGGTAATTCAATGGGCTTTGAGGAATCTTCCAGATTTTCTTAGAACTTATTGTACTTCAGCATCAAATACTCCAGAGTC CATTACCCAACCATCATGGTTCTATTTTTTTCATTTGCGATTCTCCTTTTGGTCTGTGTAGTGGCAGGTTAACTTGACAC GCGCATGTAGTAGGGACTCGAATCCTTTTTTTTATGATGACACGGTGCAGGGACTCGAATCCATGTTATGAATGAAGTAT CCCAAAAATTTAAACTAAACAGTGACGACATATTAATGATTTTACATTGTAGTTTTAAATGTAACAATACTAATAGTAGT AATAATAATCATAAGACCTTTGGTTAAGGTTTTTTCCTCTTAATTATCCTAATTTTTCATTTAACCATTTATTCTTATTT ATGATATTATTGAGGGTTCAAACTTCAAACACTACCGAGTTTCAGATTTAAACTTCATTCCTTATTTTCACTCAAATTAT TTGACTGTTTGCTGAAAGATGGTGTTTTTTTTGTCTTTGATACCGAGTGAAGTTAATTAAGGATGTCATTTACCTCTTCT CAAATCCTGAGATG
CDS sequence (LotjaGi1g1v0009500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTCAGCTGGTGATGATGATGATGCCAACATTGAACTTGGTGCTACCTTTCTCCTCACCACCACTAGCACTAGCAG AAACAGCAAGTACAGCAAGATATGGCGTAGAACCTCCTTAAACATAAGCTTCCTCATCTCTTTGAAGAAGTCAACATCTG CTAATGAGTCTCCTCCACCATCACCACTTTCTTCAGTGCCATACACCTCATTGTCTCCCTCTGAGCCTCCAGCTAGAACC TCCTCTTCCAAATCTTGTGTTGAAATTGATGTAGAGGAAGGAGAAGAAGATGCAGAAGAAGGGCACATTAGGAATGATAT TGCAAGGATTGTGAAGGAGAAGGACTTGAAATCACTGAATGACCTTGGTGGGGTCAACCGTGTGTGTGATGTTCTTCATG ATCAACGCCGACACTCAGAGTCAGAGGAGAGCTCTAGTGAGAATGAGGTCCTTGGTGTGTTGGGCTCCACAGTGCAAGTT CATGGAACAAGCTTCTCCAGGTTTTTGTTGATTAGCTTCAAACAGAACCGTTACACAATTTCAATGCTATTGATTGCAGC TGGATTGACACTTGCCACAGGGTTCAAGCAAGAGGGAGCTAGATATGGTTGGCATGATGGTGTTGCTATAGTTTTTGCTG CTATGGTCCTGGTTGCATTCTCTTCAATAGCAAACTTCTGGCGTCAAAGAGAAATGATGAAATTGGCAAAGAGAAGGGGC AAGTTGGAATTCACAGTTCAAAGAGGTGAAGGATGCACAACAAAAGTTGCCATATCAGACATTAAGGTCGGTGACAAGGT GCGTCTGGGGCAGAATGATGAGGTTCCAGCAGATGGTTTGCTTGTAAATGGTGACATCCTTGTGATGGAAGAGGCAACAC AAAGCAAAAGAGATTGTGAGGGGAACCCATTTCTTGTAGCTGGTTCAAAGGTGCTTGAGGGTCATGGACTGATGCTTGTA GCATCAGTTGGATCTTTGGCTGAGATGCCAAGATCTATAGGTCTCAAAATGGGTCAGGCTCGACGGACAGACCCAAAAAT GTGTTGGCTCGCTGCGGGCCGACACCAGCCGGAACTGACACCCCTACAGAGCTCAATGAGTTACAATTCTGAAAAGGGAT GCTTGCTGGGGAGTCTAATTGAGAAGCCAATTTCATACATTGACAAAGCTTCTCTTCTTATCTTCACCCTGGATGTGCTT GTAGTTTTCATTCGCCTAACTTGTAAGAAGGATGGAGATAGTAACGGGTTGCCGGAAATTAAGGGGAATGTCTCACTTGG CATGGTGATGGAAGTCCTTGAGAAATTATTTTTGAGACCACCAGGAAGGATTTTCATCTTCACAGGTCTTTTCACTGTTG TGGTACTATGTGTGCAACATGGTGTGCCACTTATGGTTACTATGTCTCTCAATGACCAGATTGATAAGGTAGAATCAGAC CAAGATGATGCAGTTCTTCATGATTTATCAGCTTGTACAACAATGGGGTTGGTAACTGTCATCTGCATTGATGTATCAGG TGGGCTTATATCTAAACCAATGGAAGTTAGCAGAATATGGATGGGGGAGACAGAGATCAGCAACAAGGTTGAGGGATCAG AAACAGATCTAGTTGTGCTTGAAGTCCTTAAACAAGGAGTTGGTTTATCAATTCTTGCACCTGAACTTTCTCTTTCTCCA ATGTCCCGTTCACTTGTTTTTTGGGCAGAAACAGCATGGGAAATGAACATGAAATCTCTCACAGAAAATTTTGACATTCT TAACCACAGAAATTTGAGTTCTGACAAAGAAGGAAGTGGAGTTTTGGTGAGAAAAGCTGGGGCCAATGAACAAGCTCTGC ACTTACACTGGAGTGGGGCTGCATCCACAATATTGGAAATGTGCTCACATTACTATGATGGTGAAGGAGAATGTTGTTCC ATGGAAAATCAGAAAATCAAATTTGGACAGGTGATTCAAGAGATGGAGGAGAGTGGCCTAAAACCAATTGCATTTGCTCA TAGAGAAACACAGGTGGAAGAACTTGAGCAAGATGAATTGATCTTGATCGGATTGATAGGCCTCAAATACACATGCCAAG AATCAACAAAAGTAGCTTTGAAAAAACTCAGAGATACTAAAATAAAGATCAAATTGGTCTCAGGGGATGACATCATGTCA GTGAAAGATATAGCTTGTGATCTGGGACTAGGAATGGAAGAGATAGAAGGTGGACATGTTGAAGGCAAACAACTTCAAGA TTTGCATTGCAAAGCTAGACTAGAGAAAGTGGATCAAGCCAATGTAATGGGAAGTTTCAGCCTTGAAGATAAGCTTGACA TGGTGCAGTGCTTGCAAGAGAAAGGTCATGTAGTTGCATTCATTGGAAGAAATTTAAGTCATGCTTCAGTTCTCAAGGTA GCTGATGTAGGGATAGTTCATGATTCTCAGGGTAGAATAATGCACAGAGAGAGTTCTGGTATATCTATCAAATGTTTCAG TGCATTGAAACCAATTGTGAGGGCTGGCAGAAGTAAATATCTTAATATTCAGAAGTTCATTCAACTTCAGCTTACATTCA ACATCTCAGGGTTACTCATATCCTTCATGACAACCGTATCCACTGGAAATTCACCCCTAACAGCAATTCAATTGATTTGG GTGAATGTGCTAATGTGCCTTCTAGGTTGCATCATGATGGTAATGGAGTTAAGCAGTGAGGAACAACTTGCAAATCCACC ATCTAATAGGAATCAACCAATCATAACCATTGATATATGGAAAAACATAGTCATTCAAGTCTTTTATCAAGCATTTGCAT GCATGGTACTTGAATTTGGAGGACATGTTAGTGACTGGGAAAAGAGAGTGAGGACAACCATGATCTTCAACACATTCCTA CTGTGCCAAATCTTCAATCAGCTCAACATCATGGGTTTGTTGAAAAGGGAAATTCTCAAGATTGTTGTTCTTCAGAGATA CTTTTTTTTATTCTTGGTGGGCTTAGGTGGTTGTTTCCTTGTGCAAGTGTTGGTGATTGAGTATGCAAAAGGCCTAGCAG ATGGCATGGGCTTGAATGCTACTCAATGGGCTATATGTATCCTGGTTGGTGCTCTTTCATGGGTAATTCAATGGGCTTTG AGGAATCTTCCAGATTTTCTTAGAACTTATTGTACTTCAGCATCAAATACTCCAGAGTCCATTACCCAACCATCATGGTT CTATTTTTTTCATTTGCGATTCTCCTTTTGGTCTGTGTAG
Protein sequence (LotjaGi1g1v0009500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSAGDDDDANIELGATFLLTTTSTSRNSKYSKIWRRTSLNISFLISLKKSTSANESPPPSPLSSVPYTSLSPSEPPART SSSKSCVEIDVEEGEEDAEEGHIRNDIARIVKEKDLKSLNDLGGVNRVCDVLHDQRRHSESEESSSENEVLGVLGSTVQV HGTSFSRFLLISFKQNRYTISMLLIAAGLTLATGFKQEGARYGWHDGVAIVFAAMVLVAFSSIANFWRQREMMKLAKRRG KLEFTVQRGEGCTTKVAISDIKVGDKVRLGQNDEVPADGLLVNGDILVMEEATQSKRDCEGNPFLVAGSKVLEGHGLMLV ASVGSLAEMPRSIGLKMGQARRTDPKMCWLAAGRHQPELTPLQSSMSYNSEKGCLLGSLIEKPISYIDKASLLIFTLDVL VVFIRLTCKKDGDSNGLPEIKGNVSLGMVMEVLEKLFLRPPGRIFIFTGLFTVVVLCVQHGVPLMVTMSLNDQIDKVESD QDDAVLHDLSACTTMGLVTVICIDVSGGLISKPMEVSRIWMGETEISNKVEGSETDLVVLEVLKQGVGLSILAPELSLSP MSRSLVFWAETAWEMNMKSLTENFDILNHRNLSSDKEGSGVLVRKAGANEQALHLHWSGAASTILEMCSHYYDGEGECCS MENQKIKFGQVIQEMEESGLKPIAFAHRETQVEELEQDELILIGLIGLKYTCQESTKVALKKLRDTKIKIKLVSGDDIMS VKDIACDLGLGMEEIEGGHVEGKQLQDLHCKARLEKVDQANVMGSFSLEDKLDMVQCLQEKGHVVAFIGRNLSHASVLKV ADVGIVHDSQGRIMHRESSGISIKCFSALKPIVRAGRSKYLNIQKFIQLQLTFNISGLLISFMTTVSTGNSPLTAIQLIW VNVLMCLLGCIMMVMELSSEEQLANPPSNRNQPIITIDIWKNIVIQVFYQAFACMVLEFGGHVSDWEKRVRTTMIFNTFL LCQIFNQLNIMGLLKREILKIVVLQRYFFLFLVGLGGCFLVQVLVIEYAKGLADGMGLNATQWAICILVGALSWVIQWAL RNLPDFLRTYCTSASNTPESITQPSWFYFFHLRFSFWSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 177 | 177 | - | – | |
| MobiDBLite | 51 | 86 | 36 | - | – | |
| MobiDBLite | 67 | 86 | 20 | - | – | |
| PANTHER | 68 | 327 | 260 | 0.0 | – | |
| PANTHER | 68 | 327 | 260 | 0.0 | – | |
| SUPERFAMILY | 163 | 1044 | 882 | 5.75E-48 | ||
| Gene3D | 173 | 514 | 342 | 2.7E-11 | – | |
| Phobius | 178 | 195 | 18 | - | – | |
| TMHMM | 178 | 195 | 18 | - | – | |
| Phobius | 196 | 206 | 11 | - | – | |
| TMHMM | 205 | 227 | 23 | - | – | |
| Phobius | 207 | 227 | 21 | - | – | |
| Phobius | 228 | 443 | 216 | - | – | |
| SUPERFAMILY | 247 | 325 | 79 | 6.41E-9 | ||
| PANTHER | 365 | 1051 | 687 | 0.0 | – | |
| PANTHER | 365 | 1051 | 687 | 0.0 | – | |
| Phobius | 444 | 466 | 23 | - | – | |
| TMHMM | 444 | 466 | 23 | - | – | |
| Phobius | 467 | 485 | 19 | - | – | |
| Phobius | 486 | 510 | 25 | - | – | |
| TMHMM | 489 | 511 | 23 | - | – | |
| SUPERFAMILY | 500 | 888 | 389 | 7.46E-17 | ||
| Phobius | 511 | 845 | 335 | - | – | |
| Gene3D | 528 | 683 | 156 | 1.1E-8 | ||
| SUPERFAMILY | 557 | 688 | 132 | 1.16E-10 | ||
| Gene3D | 684 | 825 | 142 | 6.8E-20 | ||
| Gene3D | 826 | 1045 | 220 | 1.2E-32 | – | |
| TMHMM | 846 | 868 | 23 | - | – | |
| Phobius | 846 | 866 | 21 | - | – | |
| Phobius | 867 | 877 | 11 | - | – | |
| Pfam | 871 | 1040 | 170 | 2.8E-25 | ||
| TMHMM | 873 | 895 | 23 | - | – | |
| Phobius | 878 | 898 | 21 | - | – | |
| Phobius | 899 | 918 | 20 | - | – | |
| Phobius | 919 | 942 | 24 | - | – | |
| TMHMM | 920 | 942 | 23 | - | – | |
| Phobius | 943 | 953 | 11 | - | – | |
| TMHMM | 952 | 974 | 23 | - | – | |
| Phobius | 954 | 974 | 21 | - | – | |
| Phobius | 975 | 985 | 11 | - | – | |
| Phobius | 986 | 1008 | 23 | - | – | |
| TMHMM | 987 | 1006 | 20 | - | – | |
| Phobius | 1009 | 1019 | 11 | - | – | |
| Phobius | 1020 | 1040 | 21 | - | – | |
| TMHMM | 1021 | 1040 | 20 | - | – | |
| Phobius | 1041 | 1079 | 39 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
Expression pattern of LotjaGi1g1v0009500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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