Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0012200.1

Overview

Field Value
Gene ID LotjaGi1g1v0012200
Transcript ID LotjaGi1g1v0012200.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G67000.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93604|LRK10_WHEAT Rust resistance kinase Lr10; TrEMBL-Plants: tr|A0A072VEV2|A0A072VEV2_MEDTR Receptor-like kinase; Found in the gene: LotjaGi1g1v0012200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:1529312..1532952) extracted from Lotus japonicus Gifu genome v1.2.

GTAATTTCAACTTCAAGTGTTTCTTAGTTCTTACCAGTACCACAAGTGATTGGAAATCCCAGTGGACTTCTACAGTAATC AACGAACTTCTTGCATTGAAGACTCTGGGTGTTTACAATCAAAAAGCAATCAGGCTTTCCACAAAGATGTTGACAAGGAT GTCCCATCCATGAAACCTCAAATCCAGAGACCAGCATCCTATGAATTTCATCGTATGAAAATGTTTGGTCGGGTATCACC CAATTCTCTTCACTGTAATTGTAACCAAAAACGGACATGAGTGTAACAAGCTTCACGTTGCAGCCAACTTTGAAATTCCC AACCAACAAGTCCCCAACGATGGCATAAACATGGCCTTGTGAATCATGGGAATTGACGCTGCTGCTGCTGCATGGAGCTG AATCCACGTACAGTGGATCATCCCTCACTGGATTGCTGCAGTTCATGAAAACCACGTGCTGGAACATTCGTGTGTTAACT AATCTAGATTGACTGACATATCCAGTGCCTTCATCATCAACTAATCTATATTGACTGGCATCATAAGGACCTGCGTTGTA GTTGTTTTCATCTAACAACAGAGAAGAAGGAGGGAAATTGCGTGCCGATAAAAAATAGCGAGGAAAGGAGGAGCAATCTT CTTCACCCTCTTGAATGGCGGGATCGACGAGCCGGATGGTGAAGTTGTTGTAATTGATTGCCTTCACATGGTAGTTTTGG CCAGGAAACAAAGGTAACAACAGTGTGCTGTTGTTTACACAAGCTAACTCGTACTTCGGATCCCCGCAATTTGCAGGGTC ACCCTTCAGCCGAAATGGGTACATAATGTTTGTGAATTTGCCGCAATGAGAAGGAGGACACGTTGTCTTTTTAGCTGTTG CAGTTTCTTGATGCAGCTGCAGGAGTAGCAGCACAAGTATAATTTGGAGGAGGAAGCATGAGGGTGAGGAGAAGAAGGAT TTCAATTTCATGATTTATTGTTAATTTCACTTCAAGTTCTAGTTCTAGCGGGGATCGATAGAACAAACATGTTTCATTCA TTCATTCATATACTGATATACTCAGCTTTCTAAGGACATACTCAATTGATTGTCTTTCTCTAAGTCAAAGTCTTTCTTTC AGCCAGCCAGCCCTATCAAATCATGATGGACTTGGAAGTCTTTGTGTGCCACTTACGCGCATTCTTCCATTAATTGGTTT GTGGTTTGCATTATCACATTCAGATTTCTTCAATGTTGCATTTTTCTCTCAATCAAAATCATGACATTATTACATTGACT TGGAAGTCTTGTGTGGGACTGTACTGGGACGACTTACGCGCATGGGTTTGTTTGAATTTTCACATTCCACACAATTTCTT CTTTACCTTATTTCTTCAAGAAAAACAATTACTCTATGCTATAGTTAGAGAGGTTAACAGATCAGACATGAAAACTAGCA TGATGTCAATGCTAGCGCTGCTAATAATTCTGCAGCTGCTCTTCATGACTAGTGTTGGAAATGCTCACAATAATCAATCC TGTCCCTTCCATCTATCTTATGCAGATAACAGCAATGATCAGCAGATGATGATTGAATTTCCAGCACTTCCAGTTCCAGT GAGACTCCTCGTCAACTACATAGACTGCGAAAGACGAGAAATACTTCTATCTGATCCCGACCACTGTCTTCCTAGACTCT TTCTAAGACACAACTTCTCATTGTTTTACCCTTTAAGACCCTCCTCGTCGCAGTCAAGCTACAATACTAGTTTCTTCGAT TGTTCTTCAGTTGGACAACACCATCTGAGAAGCTGGGTTCAAAATTCCTCCAATGCCCAAGATATGCTGTCTTGCCCAAT TTATGTCGCTGACCCCGGAGAAAGTGTCGTTGATTTGGACCTTTTTCAGTGCACCAAAATGTTTGATCAAGTTTTGCCAT TATTTTCAGATGATGTACGGCAGAACTCACTCCAATTGGAATGGCCGGAAACAAATTTTGATAGAGGGTGCTTAAGATGT GAACACAAATTAAAGAACAAATCAAAGAGGAGGATGAAGATGAGTGAGCACAAATCAAAGCACAAAATTCATCAATCCGC AATTTTTATCGCTGCAGGTAATTTGATCAAACAAAATCTTCTGTCTCATCCTATTTATTTGACCAATTGAATTATATGAT TCCATTAAGAAAACGATATGAGTGAGTCCATTACAAACATTCATGTGTCTTTTTAACTGATATAACAAAACAGAAAAATG ATACACCATTTGGGGCACATAAAAGCTTATTCCTCTTTGCTCACGTTTGTTTGATCCATTTTGTTTTCATTTGAACATGC TTTTGTTTCAAGTTTATATTTTTGAAATTTGCAGGTGTAGTTATTGGTTTACCTTTCCTGGTGTTTTTGCTCAGTGTCAC CTTTCGAATATATCGCAATTATAGGATGAAAGGGGAGGATCATGCAAGAGTTGAGAAATTTTTGAAGGATTACAGGGCTC TGAAGCCAACCAGATTCTCTTATGCTGATATCAAGAGAATCACAAACAAACTCAAAGAGAAGCTAGGTGAAGGAGCTCAT GGAGCAGTCTACAAAGGTAAATTATCCACACAAATTCTGGTTGCTGTGAAGATCCTCAACAACTCAGAGGGAGATGATGG GACAAAGTTCATCAATGAGGTGGGAACCATGGGCAAAATACACCATGTCAATGTCGTTCGCTTGCTTGGCTATTGTGCTG ATGGGTTTCATAGAGCTCTAGTTTATGACTATTTCCCAAACGGGTCACTACAGAATTTCATCGTCTCTTCACCCAACAAC AAGGATAAGAAAACCTTCCTTGGATGGGAAAAGTTGCAAGAGATTGCTCTTGGCATAGCCAAAGGAATTGATTATCTTCA CCAAGGTTGTGATCAGAGGATTCTTCACTTTGACATCAATCCTCATAACGTCTTGCTTGATGACACCTTCACTCCAAAGA TTACTGACTTTGGTTTGGCTAAGCTGTGTTCCAAGAATCGAAGCACGGTGTCCATGACTGCAGCCAGAGGAACACTAGGC TACATGGCACCTGAAGTTTTTTCTAGAAACTTCGGCAATGTGTCTTACAAGTCTGATATCTACAGTTATGGGATGCTATT GCTAGAGATGGTTGGAGGGAGAAAGAATATTGTAAACAACACTACAGGTCAAGAAAATAATAATGTTCAAGTTCTGTATC CAGATTGGATACATGGTTTGGTTGAAGGAAGAGACATGCATGTCCGTATTGATGATGATGAAGAGGGAGATTTTGAAATT GCAAAGAAACTAGCTATTGTGGGACTTTGGTGCATTCAGTGGCATCCTATGCATCGTCCATCCATGAAGACTGTGATGCA GATGCTCCATGGAGAGGGAGACAAGTTAAAAGTTCCCACCAACCCTTTCCAGCCAAAAACTTCAGCTAGTACAAGCAGTA CTAGTGGTACTATTGTTGCAAAACGTCTGAATTTGGAGCTGGAAGTGATTCAAGAGTTAGATTAGCTTAACTATAGATTT CTATTAATTAGTTGGTTGTTCATTGTCGATGACTTATTACTTCTTAGCAATGTACTTAGTGTGTGAGTTTATCGACATAT ATAATATTTAAACTTATAATGTAACCTGAAAACTTCTGCAT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0012200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGATTGAATTTCCAGCACTTCCAGTTCCAGTGAGACTCCTCGTCAACTACATAGACTGCGAAAGACGAGAAATACT TCTATCTGATCCCGACCACTGTCTTCCTAGACTCTTTCTAAGACACAACTTCTCATTGTTTTACCCTTTAAGACCCTCCT CGTCGCAGTCAAGCTACAATACTAGTTTCTTCGATTGTTCTTCAGTTGGACAACACCATCTGAGAAGCTGGGTTCAAAAT TCCTCCAATGCCCAAGATATGCTGTCTTGCCCAATTTATGTCGCTGACCCCGGAGAAAGTGTCGTTGATTTGGACCTTTT TCAGTGCACCAAAATGTTTGATCAAGTTTTGCCATTATTTTCAGATGATGTACGGCAGAACTCACTCCAATTGGAATGGC CGGAAACAAATTTTGATAGAGGGTGCTTAAGATGTGAACACAAATTAAAGAACAAATCAAAGAGGAGGATGAAGATGAGT GAGCACAAATCAAAGCACAAAATTCATCAATCCGCAATTTTTATCGCTGCAGGTGTAGTTATTGGTTTACCTTTCCTGGT GTTTTTGCTCAGTGTCACCTTTCGAATATATCGCAATTATAGGATGAAAGGGGAGGATCATGCAAGAGTTGAGAAATTTT TGAAGGATTACAGGGCTCTGAAGCCAACCAGATTCTCTTATGCTGATATCAAGAGAATCACAAACAAACTCAAAGAGAAG CTAGGTGAAGGAGCTCATGGAGCAGTCTACAAAGGTAAATTATCCACACAAATTCTGGTTGCTGTGAAGATCCTCAACAA CTCAGAGGGAGATGATGGGACAAAGTTCATCAATGAGGTGGGAACCATGGGCAAAATACACCATGTCAATGTCGTTCGCT TGCTTGGCTATTGTGCTGATGGGTTTCATAGAGCTCTAGTTTATGACTATTTCCCAAACGGGTCACTACAGAATTTCATC GTCTCTTCACCCAACAACAAGGATAAGAAAACCTTCCTTGGATGGGAAAAGTTGCAAGAGATTGCTCTTGGCATAGCCAA AGGAATTGATTATCTTCACCAAGGTTGTGATCAGAGGATTCTTCACTTTGACATCAATCCTCATAACGTCTTGCTTGATG ACACCTTCACTCCAAAGATTACTGACTTTGGTTTGGCTAAGCTGTGTTCCAAGAATCGAAGCACGGTGTCCATGACTGCA GCCAGAGGAACACTAGGCTACATGGCACCTGAAGTTTTTTCTAGAAACTTCGGCAATGTGTCTTACAAGTCTGATATCTA CAGTTATGGGATGCTATTGCTAGAGATGGTTGGAGGGAGAAAGAATATTGTAAACAACACTACAGGTCAAGAAAATAATA ATGTTCAAGTTCTGTATCCAGATTGGATACATGGTTTGGTTGAAGGAAGAGACATGCATGTCCGTATTGATGATGATGAA GAGGGAGATTTTGAAATTGCAAAGAAACTAGCTATTGTGGGACTTTGGTGCATTCAGTGGCATCCTATGCATCGTCCATC CATGAAGACTGTGATGCAGATGCTCCATGGAGAGGGAGACAAGTTAAAAGTTCCCACCAACCCTTTCCAGCCAAAAACTT CAGCTAGTACAAGCAGTACTAGTGGTACTATTGTTGCAAAACGTCTGAATTTGGAGCTGGAAGTGATTCAAGAGTTAGAT TAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0012200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMIEFPALPVPVRLLVNYIDCERREILLSDPDHCLPRLFLRHNFSLFYPLRPSSSQSSYNTSFFDCSSVGQHHLRSWVQN SSNAQDMLSCPIYVADPGESVVDLDLFQCTKMFDQVLPLFSDDVRQNSLQLEWPETNFDRGCLRCEHKLKNKSKRRMKMS EHKSKHKIHQSAIFIAAGVVIGLPFLVFLLSVTFRIYRNYRMKGEDHARVEKFLKDYRALKPTRFSYADIKRITNKLKEK LGEGAHGAVYKGKLSTQILVAVKILNNSEGDDGTKFINEVGTMGKIHHVNVVRLLGYCADGFHRALVYDYFPNGSLQNFI VSSPNNKDKKTFLGWEKLQEIALGIAKGIDYLHQGCDQRILHFDINPHNVLLDDTFTPKITDFGLAKLCSKNRSTVSMTA ARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNIVNNTTGQENNNVQVLYPDWIHGLVEGRDMHVRIDDDE EGDFEIAKKLAIVGLWCIQWHPMHRPSMKTVMQMLHGEGDKLKVPTNPFQPKTSASTSSTSGTIVAKRLNLELEVIQELD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 171 171 - –
PANTHER
PTHR27009
10 558 549 9.1E-257 –
PANTHER
PTHR27009:SF138
10 558 549 9.1E-257 –
Phobius
TRANSMEMBRANE
172 194 23 - –
TMHMM
TMhelix
172 194 23 - –
Phobius
CYTOPLASMIC_DOMAIN
195 560 366 - –
Gene3D
G3DSA:3.30.200.20
209 310 102 2.1E-25 –
SUPERFAMILY
SSF56112
219 515 297 4.92E-72
IPR011009
ProSiteProfiles
PS50011
235 530 296 36.881
IPR000719
Pfam
PF00069
237 513 277 3.4E-47
IPR000719
ProSitePatterns
PS00107
241 263 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
311 529 219 1.3E-51 –
MobiDBLite
mobidb-lite
522 541 20 - –
MobiDBLite
mobidb-lite
527 541 15 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0012200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…