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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0012400 |
| Transcript ID | LotjaGi1g1v0012400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G66920.2 Protein kinase superfamily protein; Swiss-Prot: sp|P93604|LRK10_WHEAT Rust resistance kinase Lr10; TrEMBL-Plants: tr|A0A072VFM0|A0A072VFM0_MEDTR Receptor-like kinase; Found in the gene: LotjaGi1g1v0012400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1553710..1555919) extracted from Lotus japonicus Gifu genome v1.2.
TATTAAAATACATAGCATCAATATTTTTACAGCTAGCATAGCATTCTGTTGAATTTTAAATACAATATTGTATATCGTCT TGTTTCTCGCCTCTTTCCTTCAGGGAGAGATTAGATGGAAAGCACATGATATAAATTAGACAAAAAGTGTCAAAGTGATT TGCTAGCTATATCCCAGCTCGTTCACCTTGATGATGACAATGCTAGCACTGCTAATGCTGTTGCTACTCATGAGTGTGGG AAATGGTCACAATGACACCTCCATCCAATGTCCCTTCCGTCTATCTTATGCAGATAACAGCACTGATCCGATGATTGAAT TTCCAGCACTTCCAGTCCCAGTAAGGTTCCTCGTCACCGAATTAGATTGCGAATTACGAATGATGCTTCTATCTTATCCC GAGAACTGTCTTCCTATGTTATTTGTAAGATACAACTTCTCATTATTTTACCCTTTACAATACGATTCGTCCTTAATCCA GAATATTACTTTCTTCAATTGCTCTTCACTTGGAGACATGTTGTCTTGCCCAGTTTTTGTTGTTGAGTCTAGCCAAAGTG TCCTTGATTTGAACCTTCAGTACTGCACCAAAATGTTTGATCAAGTTTTGCCACTATCAACATTTTATTTACAGCAAAAC TTAATCCCATTGGAATGGTCGGAAACAGATTTTGATAGTGGATGCTTAGAATGTAAGCACAAGTCAAAAAAGAAGATGCC AGTGTCCGCAATTTTGGCCGCTGCAGGTGACTGAACAGACATAATTTTGTTTGATCGTTCAATCATGATTTTATTTCATT ATGTAGATGACATTTTCTTTTCGAAAATTTGCAGGTGTAGTTGTTGGTTCAACTTTGCTGGCGTTTCTGCTCGGTGCCCT CTTTCGAATATATCGGTATTATAGGGCGAAAGGAGAAGACGATACAAGAGTCGAAAACTTTTTGAAGGATTACAGGGCTT TGAAGCCAACCAGATTCTCCTATGCTGATATCAAGAGAATCACAAACCTGTTCAAAGAAAAGCTAGGTGAAGGAGCTCAT GGAGCTGTCTACAAAGGTAAATTATCCACAAAAATTCTGGTTGCTGTGAAGATCCTCAACAACACTGAGGTAGATGATGG GACAGAGTTCATCAATGAAGTAGGAACCATGGGAAAAATCCACCATGTCAATGTTGTTCGCTTGCTTGGCTACTGTGCTG ATGGGTTTCACAGAGCTTTAGTTTATGACTTTTTCCCAAATGGGTCACTGCAAAATTTCATCTCTGCACCAAACAACAAG GATAATAACAACTTCCTTGGATGGGAAAAGTTGCAAGAGATTGCTATAGGCATAGCCACAGGAATTGATTATCTTCACCA AGGCTGTGATCAGAGAATTCTTCACTTTGATATCAATCCTCATAACATCTTGCTTGATGACACTCTCACTCCGAAGATTA CTGACTTTGGTTTGGCCAAGCTGTGCTCCAAAAATAGAAGCACTGTGTCCATGACTGCAGCCAGAGGAACACTAGGCTAC ATGGCACCTGAAGTTTTTTCTAGAAACTTCGGCAACGTGTCTTACAAGTCTGATATCTACAGTTATGGGATGCTATTGCT AGAGATGGTTGGAGGGAGAAAGAATATTGTAAACAACACTACAGGTCAAGAAAATAATAATGTTCAAGTTCTGTATCCAG ATTGGATACATGGTTTGGTTGAAGGAAGAGACATGCATGTCCCTATTGATGATGATCATGAAGAGGGAAATTTTGAAATT GCAAAGAAACTAGCGATTGTGGGACTTTGGTGCATTCAGTGGCATCCTATGCATCGTCCATCCATGAAGACTGTGATGCA GATGCTCCATGGAGAGGGAGATAAGTTAAAAGTTCCCACCAACCCTTTCGAGCCAAAAGCTTCAGCTAACACAAGCACTA GTAGTACTATTGTTGCTGCAAAACGTCTGAATTTGGAGCTGGAAGTGATTCAAGAACAAGATTAGATTTAACACAGGTTT TTATTAATTAGTTGGCACTTTTTAGCAATGTAGTTTAGACGACAAAGACCATGAATTTATGGGTAACGTAATTTCAGTTG TTTTTTAAGAAATATACTAGTTTTATACACCTTTTTGTCCGGATATGAACCATGGACAAATGCTTATGACTCAAATCTGA TCATAACATTGATAGATTAAATGCTTATGACTCAAATCTGACAATTTCAT
CDS sequence (LotjaGi1g1v0012400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACATTTTCTTTTCGAAAATTTGCAGGTGTAGTTGTTGGTTCAACTTTGCTGGCGTTTCTGCTCGGTGCCCTCTTTCG AATATATCGGTATTATAGGGCGAAAGGAGAAGACGATACAAGAGTCGAAAACTTTTTGAAGGATTACAGGGCTTTGAAGC CAACCAGATTCTCCTATGCTGATATCAAGAGAATCACAAACCTGTTCAAAGAAAAGCTAGGTGAAGGAGCTCATGGAGCT GTCTACAAAGGTAAATTATCCACAAAAATTCTGGTTGCTGTGAAGATCCTCAACAACACTGAGGTAGATGATGGGACAGA GTTCATCAATGAAGTAGGAACCATGGGAAAAATCCACCATGTCAATGTTGTTCGCTTGCTTGGCTACTGTGCTGATGGGT TTCACAGAGCTTTAGTTTATGACTTTTTCCCAAATGGGTCACTGCAAAATTTCATCTCTGCACCAAACAACAAGGATAAT AACAACTTCCTTGGATGGGAAAAGTTGCAAGAGATTGCTATAGGCATAGCCACAGGAATTGATTATCTTCACCAAGGCTG TGATCAGAGAATTCTTCACTTTGATATCAATCCTCATAACATCTTGCTTGATGACACTCTCACTCCGAAGATTACTGACT TTGGTTTGGCCAAGCTGTGCTCCAAAAATAGAAGCACTGTGTCCATGACTGCAGCCAGAGGAACACTAGGCTACATGGCA CCTGAAGTTTTTTCTAGAAACTTCGGCAACGTGTCTTACAAGTCTGATATCTACAGTTATGGGATGCTATTGCTAGAGAT GGTTGGAGGGAGAAAGAATATTGTAAACAACACTACAGGTCAAGAAAATAATAATGTTCAAGTTCTGTATCCAGATTGGA TACATGGTTTGGTTGAAGGAAGAGACATGCATGTCCCTATTGATGATGATCATGAAGAGGGAAATTTTGAAATTGCAAAG AAACTAGCGATTGTGGGACTTTGGTGCATTCAGTGGCATCCTATGCATCGTCCATCCATGAAGACTGTGATGCAGATGCT CCATGGAGAGGGAGATAAGTTAAAAGTTCCCACCAACCCTTTCGAGCCAAAAGCTTCAGCTAACACAAGCACTAGTAGTA CTATTGTTGCTGCAAAACGTCTGAATTTGGAGCTGGAAGTGATTCAAGAACAAGATTAG
Protein sequence (LotjaGi1g1v0012400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTFSFRKFAGVVVGSTLLAFLLGALFRIYRYYRAKGEDDTRVENFLKDYRALKPTRFSYADIKRITNLFKEKLGEGAHGA VYKGKLSTKILVAVKILNNTEVDDGTEFINEVGTMGKIHHVNVVRLLGYCADGFHRALVYDFFPNGSLQNFISAPNNKDN NNFLGWEKLQEIAIGIATGIDYLHQGCDQRILHFDINPHNILLDDTLTPKITDFGLAKLCSKNRSTVSMTAARGTLGYMA PEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNIVNNTTGQENNNVQVLYPDWIHGLVEGRDMHVPIDDDHEEGNFEIAK KLAIVGLWCIQWHPMHRPSMKTVMQMLHGEGDKLKVPTNPFEPKASANTSTSSTIVAAKRLNLELEVIQEQD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 10 | 10 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 8 | 390 | 383 | 7.5E-234 | – | |
| PANTHER | 8 | 390 | 383 | 7.5E-234 | – | |
| Phobius | 11 | 22 | 12 | - | – | |
| Phobius | 23 | 26 | 4 | - | – | |
| Phobius | 27 | 392 | 366 | - | – | |
| Gene3D | 41 | 142 | 102 | 1.1E-25 | – | |
| SUPERFAMILY | 48 | 347 | 300 | 4.86E-72 | ||
| ProSiteProfiles | 67 | 362 | 296 | 36.343 | ||
| Pfam | 70 | 345 | 276 | 3.5E-47 | ||
| ProSitePatterns | 73 | 95 | 23 | - | ||
| Gene3D | 143 | 361 | 219 | 2.1E-52 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0012400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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