Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0034100.1

Overview

Field Value
Gene ID LotjaGi1g1v0034100
Transcript ID LotjaGi1g1v0034100.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT3G20530.1 Protein kinase superfamily protein; Swiss-Prot: sp|F4JEQ2|PBL23_ARATH Probable serine/threonine-protein kinase PBL23; TrEMBL-Plants: tr|K7M4K5|K7M4K5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0034100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:4496864..4501173) extracted from Lotus japonicus Gifu genome v1.2.

TAAAAGCACATTATGAAATCCTATATTGGAGAACTTGAGAAAATGATATCAGTGATATTTTTGAATTAGCATATTTGACA AAGTCATCATTTCCTTTCCTAAATGGCATTTGAACAAAAATGAAGCCAAAGAAACCTTGTGGTGTGTGAAAGGTTCTACG AAGCCAGAAGTTGAAGGATCAACTTGGTGTTTGAAAGGCCAAGGTTTGAATTAAAATATCTGAAATTGATTTTAAGCCAC TTCTGGAGTGTCTCAAAGTTACAAGCATTGGATCATTGGCTTACATCTACATGATGAGGGTTAGATTTGAAAAGATGATG CATAGCATTGCAATTCTATAAATGTGGTTCTGAATTCTGATTGGATCATCAAATATATAGGAGTGGAAAATGAGCTTCTT TTCATGTTGCAAGCCTCCAGAGAAGATCAACAAGAACTCATTGAAGAAGAGCATTAAGGGATACCATGGTGCCAAAACTC TCCCTTTATTTTTTCCTACCTTCAATGCTGATTTTTTTCATTGCACAAAATATTTTTTCCTTCATGTTTTCTCTGTTACA AATCATTTACCTTCGCTATACAATCATATTTATCTCAACATGAAATTTTAAAATGGAAATCTGTGAATGTCAGTGTGATT AGCCTTTACAATAAATTATATGAAGCCACAAGGATGTGAAATTCAGAAGTTCAATTCATGTCCTTCTCTTTTGGATCTGT TGTTAATTAGTTTGATACTTTATTGTTTTCAGCTTCTTCAATGACATGCTTTAGAAGCAAAAACATACAAATGAAATCGC TGTGCCATCAAGTCCACATTCACGTTTGAGTTTAGGATCTTCATCTTATCAATATCCAATCTTAATATAATTAAGCTAAG GATGCCTTACTTTCTTCATCACTAGTTATCTCCCTGAATTGTTAACCTTTTGAAGTTTGCATAATATTTCTAAGGTGCTA GTGCAAAGTGATTTTTAAGTGAGCCTATGAAGTGGATTTGTTCCTTCTTCTTTTCAGCATGTTTGGACAAATTTCTCTTT TCTCTGAATCAATTCTGAAAGCTCAAAAGCAAGCTTCTCCCTAGAATTGATTCTTCCTTTATAAGAATTAATTATAGAAA GATTTCCGAACATGCACTAAATCTATAACATACTTTATCTTGTAGATAGAAGCAAGCAAAAATACATAGAAGAAGAGATT GTGAAAATTGGAAAAGGAAATATTACCGCTCAGATTTTTACATACTATGAGCTATGTGTTGCAACTCAGAGCTTTCACTC TAAGAATATGATTGGTGAAGGAGGCTTTGGGAGAGTGTATAAAGGACGCATTAAAAGCTTAAACAAGGTACTACTTCAAC TCATATCTATTTGAATATTATGCTGCTAACAGTAATAATACTTAGACACTCAAACTGTGCAAATATTCAAATATCACATT CATTACTTCTCTTTATTTTGCGCTCTGAGTGTATGCACTATGTGGATGTTTACTAATCATTTTCCTTTTTCTAATGAAAC ACATTGAGGTTTTCACTTGTAAGCAACATTCTAAAATGCAGTGTTACATGCAGGTTGTTGCTGTGAAGAAGCTTAATAGG AATGGATACCAAGGAAGCAGGGAATTTCTGGTAGAGGTTTTGATTTTGAGTCTCTTGCAGAACCCCAACCTTGTCAATTT GCTGGGGTATTGTGCTGATGGTGATCAAAGGATTTTGGTATATGACTACATGGCGAATGGTTCTTTAGAAGATCATCTTC TTGGTAAGTAAATGCACTTCTTACACAATGTCACCAAAGTTGTAATGCAATTCCTCACTGCTAGAAATCAGATTAACATA TCCAATTTGTCTGTTATTTTGAATAAATGCAATGGACTTATAAGTGCGTGTTCAGATCAGTGCTTTGGATCACTGTTCTG AGAATTGATTTTGGATAGAATTCATTATGTTAAAATTGATTTTGGTCAAAGTGAGTTGAAAGAAGTGATTTATGCTTAAA ATATGTTTATGAGAAAAGTGATTTCTATAGGGTTATGAAATCCCACAATTGATGTAGTGCATGCTTGCATTTCAGTTCAA CTGAACTGAATGTTAACGAGCCTTGATCCTTCCTTTCACGTTTCAAGCTTTGGAAATCGAGAACTTGAGTTCCCAGACAA AGCAAACAGCTTTTGAAGCAAAACCAAACATAGTCACATCCATCCCATAAGTTACTCTCTCTAGCTTCAGCTAGAATTGT TTTTAAGACTAAAATTACCAAATACACCGTGGGACAATTAATGACAATTAAGCAAATTTATTGAATCTTGAAGATTTTAA TAGTGTGTTTGGATTAGTAGTGAACACAAAAATCAAATTACACTAACTCTCGAAGCTACACTTTATAGCTTCTAGCTTCT CCCCATAATTGATTACGAGTCTCACAACCGTAAAACCAAACATGCTATAGCCTATAAGTAGATTTCTTTTGTACCTTTCC ATTTGTGTGACAAACCAATTTTATGCAATTTTACATGAGGAATTTGATGCATCCAAGCATATATTTGCACCACCCTCTAT ATATGTTTTCTGACCAACAACAAAAGAAAAATGATTTTCAGAACTACCTCAGGGAAGAAAGCCTTTGGATTGGCAAACTA GAATGAAGATTGCAAAAGGTGCAGCAGAAGGACTTGAGTATCTACATGAAGAAGCTGATCCTCCAGTGATATATCGCGAT TTCAAGTCATCAAACATACTACTAGATGAAAATTTCAATCCAAGGCTCTCTGATTTTGGACTTGCAAAGTTTGGTCCAAC AGGTGATAAAACACATGTATCCACAAGGGTGATGGGAACTTATGGCTACTGTGCTCCTGAATATGCCTCAACAGGTCAAT TGACATCAAAATCTGATGTATACAGCTTTGGAGTAGTTCTTTTAGAGATGATCACCGGAAAAAGAGTGTTTGATCATTCA AGACCATTTGAAGAGCAAAACTTAGTCGCTTGGGTATGTCAGGAAACCTTCTTTATGTGCCTAAAATCATGATATTTCTA TAGCATAAAATTTCAGTATTTACAATCAGTACTGCATTTTAAAGTGCGCGTACATCAACTGGCGTGAGGTTAATCTAACT TAAGCAGAGTTCTCCAGTTCGAGTCCCGTGTCCTAAAATTTAGGTTAGGCATAACTCTACCTTGAAAGCTAGCTTAGAAG TGATAATTGCTCCACCCACTCTTATTTAGGCATTTCTCTAGTCAATGTGAGACTTCTCAACACAACCCCTCAGCGGATTG TGAAATTTACATGAATGAACATGTGTTGGTGGCCCATATATGGAATAATTTGCAGTCAATCTTATCTCTAAGCTAGCTTT TAGGGGTAGAGTTAGACTTAACCCAAATTCAAAACTGTGAAGGCAATTGCTTTCAATACTTGGTATAGTGGTATTTCCTA GCTTGAACATGATTATGTCAGTGTAGGATAATTGTGGTTTAAAAAAATCCTAAAGTTTAAACACTCAATTTCACTTTCAT TTCTTATTCACCCCAATTTTTATTCCCATCTCTATTTTTTTCTACATCACATTCACATCATCTATCACACTTCTCAATAT TTTTTCCTTCATAATTTTCCATTTACACTCTAATCAACATAAGAACTCAAAAAAATTATGTTTTGACCAGTATACACAAA TGTATAGTCTTTCACATTCATATCTTTTCTTCTTTTCAGGCACAACCACTATTCAGAGACAGAAGGAAACATGCATCAAT AGCTGATCCATTGCTAGAAGGGACGTACCCAAAAAAGGGTCTATCCCAAGCACTAGCAGTTGCTGCAATGTGTCTTCGAG AGGAAGCTGAAGCTAGACCTGTGATAAGTGATGTAGTTACAGCTCTTGGCAATTTATCAAAGAAGCATGTGTAAAGTTGG TAAGCAACAACGTATACAAATATCAGGACAGAGAATGCAGCTGAGAAAAATGAATCTAAGTGAAGAGGGTCATACAAAAA GATAGTAAATGAATTGCTAATGAAGTTTGTGATTCATTCCATAAAATTTCATCTTGCTGCAACTTGGTATCATGATGAAA ATCAAAACCATTACCACATTTTTTTCATATTAATTTATTGAGTAGTAACAGTAGTCATTGATGATAGAAACAAGATTGCT ACCAGATTCATGAGTGCCTACTCATTGAGATTGTCATAAATTTTGTTACAGTAGACTGAGGTGACAAAAATAACTTGTTT ATAAACTGAATTTTATACACTTGTTTGGGTTTGAAAAATAGTGAATTAATGACAATTTGTTACAATGCCC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0034100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGCTTCTTTTCATGTTGCAAGCCTCCAGAGAAGATCAACAAGAACTCATTGAAGAAGAGCATTAAGGGATACCATGA TAGAAGCAAGCAAAAATACATAGAAGAAGAGATTGTGAAAATTGGAAAAGGAAATATTACCGCTCAGATTTTTACATACT ATGAGCTATGTGTTGCAACTCAGAGCTTTCACTCTAAGAATATGATTGGTGAAGGAGGCTTTGGGAGAGTGTATAAAGGA CGCATTAAAAGCTTAAACAAGGTTGTTGCTGTGAAGAAGCTTAATAGGAATGGATACCAAGGAAGCAGGGAATTTCTGGT AGAGGTTTTGATTTTGAGTCTCTTGCAGAACCCCAACCTTGTCAATTTGCTGGGGTATTGTGCTGATGGTGATCAAAGGA TTTTGGTATATGACTACATGGCGAATGGTTCTTTAGAAGATCATCTTCTTGAACTACCTCAGGGAAGAAAGCCTTTGGAT TGGCAAACTAGAATGAAGATTGCAAAAGGTGCAGCAGAAGGACTTGAGTATCTACATGAAGAAGCTGATCCTCCAGTGAT ATATCGCGATTTCAAGTCATCAAACATACTACTAGATGAAAATTTCAATCCAAGGCTCTCTGATTTTGGACTTGCAAAGT TTGGTCCAACAGGTGATAAAACACATGTATCCACAAGGGTGATGGGAACTTATGGCTACTGTGCTCCTGAATATGCCTCA ACAGGTCAATTGACATCAAAATCTGATGTATACAGCTTTGGAGTAGTTCTTTTAGAGATGATCACCGGAAAAAGAGTGTT TGATCATTCAAGACCATTTGAAGAGCAAAACTTAGTCGCTTGGGCACAACCACTATTCAGAGACAGAAGGAAACATGCAT CAATAGCTGATCCATTGCTAGAAGGGACGTACCCAAAAAAGGGTCTATCCCAAGCACTAGCAGTTGCTGCAATGTGTCTT CGAGAGGAAGCTGAAGCTAGACCTGTGATAAGTGATGTAGTTACAGCTCTTGGCAATTTATCAAAGAAGCATGTGTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0034100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSFFSCCKPPEKINKNSLKKSIKGYHDRSKQKYIEEEIVKIGKGNITAQIFTYYELCVATQSFHSKNMIGEGGFGRVYKG RIKSLNKVVAVKKLNRNGYQGSREFLVEVLILSLLQNPNLVNLLGYCADGDQRILVYDYMANGSLEDHLLELPQGRKPLD WQTRMKIAKGAAEGLEYLHEEADPPVIYRDFKSSNILLDENFNPRLSDFGLAKFGPTGDKTHVSTRVMGTYGYCAPEYAS TGQLTSKSDVYSFGVVLLEMITGKRVFDHSRPFEEQNLVAWAQPLFRDRRKHASIADPLLEGTYPKKGLSQALAVAAMCL REEAEARPVISDVVTALGNLSKKHV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001:SF586
3 341 339 2.5E-161 –
PANTHER
PTHR27001
3 341 339 2.5E-161 –
Gene3D
G3DSA:3.30.200.20
21 139 119 2.3E-30 –
PIRSF
PIRSF000654
39 345 307 1.1E-34 –
SUPERFAMILY
SSF56112
47 335 289 1.6E-83
IPR011009
Pfam
PF00069
63 333 271 7.6E-49
IPR000719
ProSiteProfiles
PS50011
63 345 283 38.987
IPR000719
CDD
cd14066
69 340 272 2.31986E-107 –
ProSitePatterns
PS00107
69 93 25 -
IPR017441
Gene3D
G3DSA:1.10.510.10
140 345 206 2.0E-62 –
ProSitePatterns
PS00108
186 198 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0034100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…