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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0048900 |
| Transcript ID | LotjaGi1g1v0048900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTPase obg; TAIR: AT3G49725.1 GTP-binding protein, HflX; Swiss-Prot: sp|Q0WTB4|Y3725_ARATH GTP-binding protein At3g49725, chloroplastic; TrEMBL-Plants: tr|K7KB86|K7KB86_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6755598..6760949) extracted from Lotus japonicus Gifu genome v1.2.
CGAAATTAGATTGCTAATAAAATTATCAGCACCAAAAAAAATATTGTTAATAACATATGATCTTACAATCGAGGGCATTT CAGTATTTTCACAGCACTGGAAGAAAACCCTCAACCCCATTCATGATTCTTCCAAACTCGAAGAAGAAGAAGAAGAATTG CAGAAGCATAAAACACAATGTTGAGAACTTTTTATGCGAATCTCGAATGTTCCACCAAAAAGATTCAAACTTCACTCTCT TCACCTCATTCCAAATGGTGGGCACCTTCTCCCTACTCCACCACCGCCACCGCCATCACCTCCAACGCCAACGGCGACCC TGCAACACCGCCGAAGCTTCTCGTCGTTCAACCCCGTCTCCGCCCCGAAAAGCTCTTTCAGGCCAAGCTCAATGAAGCTC TCTGCCTCGCCAATTCCCTTGAAGAACAGCGTGATGGGTATTTCCATACTGATTTCTTTGATAAGCCTTTGCCCCCTCAC CTCCTTGTTCAGAATCCTTCTGTCAAAGGCCATAAGCCTCGTGCAGGTTTCATTTCTCATTCAATCGGTTTCACTTTCTG CCATGTATGATATTTTGTATGATATGATGATGATGATGATGATGATGATGTGCTTTGTGTGATTGTGTTTTTCAGACACA TATTTTGGGCCTGGAACAGTTGATAACATCAAATGCAATCTGAGAGCTGCTGAAGATAAGGTTAGAATAAGAGAAGCTTT TGTTGGTTTTTCATGTGATTGGTTATGTGGGGTATTGGTTTGGTTTCAGTTTATAGCATGTTTGGACAATCCCTCAGAAT CAATTTTGGTAAGCAGAAGCTACTCACAAGCTTCTCTGCATAATTGATTTTGACTTCAGAATCAGTGAATGTTTGGATTA ACCTTCTAGAAGTGATTTTGGGGAGAGGCTTGTTTGAGCAGCTTCTGGGTTTCAGAATTGATTATGATGTAAGAGAAGTT GATTCAAACATGCACTTAGTAGCAGTTTAGACTTTGGATTTTGATTGTGTTAAGTTTGTAACAATTGTAACAGGGTGGTG TGGATGCTGTTTTTGTCAATACTATATTGTCTGGGGATTAGCATTTGTTTTCAATCAATTTTGTCAGTTTATAGCATGTT TGGATAATCCCTCAGAAACAATTCTAGTAAGCAGAAGCTACTCACAAGCTTCTCTGCATAATTGATTTTGACTTCAGAAT AATGTTTGGAAAGCCTTCTAGAATTGATTTTGAGGAGAAGCTTGTGTGAGTAGCTTCCGGGTTTCAGAATTGATTCTGAT GTAAGAGGAGTTGATTCAAATATGCTAGAATAGAAGACTTCCAAACATGCAGTTAGTAGCAGTTTGGGCTTTAGATTTTG ATTGTGTTAAGTGTGTAACAATTGTAACAGGATGGTGTGGATGCTGTTTTTGTCAATACTATATTGTCAGGGGTTCAGCA ACGAAACCTGGAGGCAAGTTCTGCTTGTGTTAATTTTCTCCCTTCTTTTTTTGGAATGGCAAATTGATGTTTTTCGAATG CTGTGTTTTTCACAGAGGGCTTGGGATAAACCTGTGCTGGATCGCGTGGGTCTTATAATAGAGATTTTCAATGCTCATGC ATTCACGAAGGAAGCAAAACTACAGGTATATTACGTCGCCTAGTTAAGCTGTTTGATGGTTGATGCAGTTGTCTCTAGAA GTGAGTCTCATGTTGCATTGTAACTGCCAGTAAGCTTTTCCATCTGTGTAGGCTGAACTTGCAGCTCTATCATTCAAGAA AACCAGGCTTGTTCGTGTTCGTGGCCTGGATGGTCGCCTAACATTTGGTGCTCATGGAGAAACTGAAGTTGTTAGTGCCC GAGGGTGGGTTTATGACCTAATTTCCTGGTGTTATATACCATTTTTAAATTGGACAGATATTTTTTTACATGAAATCTTG TTAATTGCTGATTGGTTTAAATTACATTCTGGGAGATTTGGTCTCAGACAAAATTTTGGACATATATGACAATTATGATG TTAATTACTGACACTACCTAAAATTCTGTGAATCTGTTTGTGATTCCTTCAGTGGGTCAGCTGACAAGAATAACCAGGCA CGAACATAGTATTTAAGTGAAACAAAACATGATTTTGCATACTCCATGTCCAATTTGTACGGCTAAACTCTTCTTTAATA TAAACTAAGCGTGGGAATCTATGACCTTTTTGCTCGCATTTGGATCACCAAATGTTACCTGTCATACCTATCGATTTTCA GCTTACATGGTTATAATGAATTACAAACATGGTTGAAACTGAATGTAACTGTTATACTTCTCTTCACACTCTCTTTCTAT TAAGAAAATATGCTTGCTCACATGAATGGTTCTGTGAACCGGCATGTCTGATCTATTGTAGTAGTAGATTTTTTAATTAG AGTAACAACATCTTACCTCTATACTTGTCACTTTCAGGAGAGGAAGTGGGGGCCAAGGTTTTATGAGTGGTGCTGGAGAA ACTGAACTTCAGCTTCAGCGGCGAAGGTATAACTTTGATTCTAAATCTTTAAGATACATACATTTCTTCTCAAGTGATAT TCATGCTTTTCCTGGCATATATCTTATGATTTCCATATAAACTTGTGTTACTTTAAAAGCTGGTTTTTTACTTCCTCACT GCATCAAGCAATGCAAATATTCACTGTAATTAGGCTTGATGCAATAGTATTTGTGCAAGGTGGGAATGTGAAGAAAAATT GTGTTTTAGGCTATATAGCTTTCCACGGAACAGTGGTCCTGATTGAGTGTCATAAGATATATTAACTCAAGCATTTATTT TGTGGTGCTTTCAAACTTCAACACACCAGAACACGGCCTTATTTGAAATTAACCTGTCCAGACTATGAATATGAACTGCT CATTGTTGGGCAATCACAGCACTTTTTATGATTATTTATTTTCACACATAATTGATCACTAAACTGTGAACCACTCTCAG AATCTTAGATAGGAGAAATTATCTATTGACACAAATTGAGGAGGTCCGCCGTACTCGGGCTTTGCAACGTGCTGGTCGGA AGCGGCATGGAGGTTCACTTGGACAAGGCTTAGCCACCGTAGCAGTTGTTGGATATACAAATGCTGTAAGTTTTCTAAGT ATATATTGGTTCACTACATATTGTAATTAGACTCATTACTAATCCCTTTCTTCATATTTTTATCAGGGAAAATCTACATT AGTTAGCGAGCTATCAGACAGCGATCTGTATAGTGATTCTCGGTAAAGTGTCCTTTACAGTTTACCTTTATGCATTTACA TTCTCAAATTCTAATATATTTATATTGCTTCTAATAATCCATTGCAGACTGTTTGCAACAGTTGATCCTAGAGTAAGAAG TGCTGTTCTTCCTTCAGGGTAATGTGACCACTGACCAGTAACTTCAGTTTATTCAAATCGCTGTTGCAGTACTCTGTTCT GTTTATTGGTTGATGGCATTGAGTATGTTATATGTATGCTTCACTTTTCTTTATTTTATTTATAGGAGGAAAGTGCTTTT AAGCGACACAGTGGGATTTATATCTGATTTGCCTGTACAGGTATGTTGAAGACATTAGCGAATTGCCATGTCTATTTATT TATTGATTCTTGTCAATGTTATTCATCAAAACTCTTGTTTAACAATGACCTAATTGTTCTATTTCTCTTCTAACTTTTAA GTTGGTGGAAGCATTTCATGCAACTTTAGAAGAAGTCGTGGAAGCTGACCTGCTTGTGGTATGATATGCCATCAAAACTT TTGAATTTTTTAAGTTGGTGGAAGCATCTCAGTACATTCTAATTCTTAGACCAGTTCCAAAAGTTCACTAATCCCTTCTT TTACCCCTTTTGAAAAGAAAAAAACAAGGAGAGAAAAGCAAAAGAAATTATCAAACTGTTAAAGTAAAGGGTGATATAAA GGTTATCATTGCCATTGAAATATCCATATCAAGGCTTTCTTTTGCTTCAAATATCCTTGACGTGTGAGAGATTAATGATA TTAGGTTTTGCTACTAGTATCCTTGATGTATGGATGATTAATGCCTAATACATAGAGTATCGGCCATGTTACATCTGGTT TCTCTTCATCACACATAGCAGAAGATTATACTGTATGAAATAATGTGCATATTAGGTTCATTTCGCCATTTCATGGTTGC TTGTGTTAAAAACTTCAAAAATGTACTTGATCCTTTATGTGAAATAAGAGAAAGACGACTCAATGATGAATCTATCTTTC CCTGAAGCATGTGGTGGATTCAAGTGCTCCCAATCTTGATGAGCATCGCTCAACAGTGTTTCAAGTTCTTCAACAAATAG GGGTGTCAGAAGAGAAGCTTCAGAATATGATTGAAGTTTGGAATAAGGTAAGACAAGTATACAACTCATCTGTCTTCTAC CAAAATGCAAGGAAAAACAAGTTTCTGTATATATCCACTCAATCTCGGTTATTATTTAGATTGATATTGAAGAAGAGGGC ATGGGTGTTGATGAAGATGAAGAGGCTGATGAAGCTAGCAGCTTCAGTGGAGAGGATGATGAGACTTCTATGATTACAGC AGAAAATGAAGGCACTGAAGAACCCGAATATGTTTGTGAGCGCTCATTGGGTGATTTGGAGGCCGTGGAAGAAAAAGAAG ACTATTCTGACGGTTGGTTGTATGAGGACACTTTGGTTAATGAAGATGATTTTTGTTCACCTTCATCTGCAGCTGACCCT CAAAATGAATCCTCTAAGGACAATGTTGTGGAAAAATATAGCTCCATGGGACCGCCGGCTCCACATGTGAAAACGTCTGC CGTTATGGGAGTTGGTTTGCAAGAGTTGCTGGAACTAATAGATGAGAAACTAAGTGCCCAGGATAAGAAGTTGAAGGGCG CACAGGTGGTTGAAAGAAATAATATCTTTCATAAAAAATGGAGGCCCTCTCATACAGAGAATTCTAGCATAGCAGTTGAA CAATAGCTTGTTCTATGGAGATAGTTTCTATCCTTATCTTTATAGTTTGTGCTACATAACAGTTTCATTATCATAACATG GCCTACAGAATCCCCACCAAAACATGGCCTATAGAATCCCCACCAAAACATGGGCTTCATCTTCTGTCACAATCTGCAAG TTATGATAGCTTTCTATGAAACATGGTTTGTTTTTTATTTAATATTCTTTTACCTGTTTTCCTTCATACTTTGTTGCATG TATTAGAGTATTAGACCCCTTTTTTTGGCCTATTGGTCTCATCAGTGTGTAATTAGAATAATAGGATAATATTTGCAGAA TACAGTGATATATGAACAAGCTCACTCTATATACATCAATTCATTTTTCCAAAATATTAATTTATTTTTTGC
CDS sequence (LotjaGi1g1v0048900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGAGAACTTTTTATGCGAATCTCGAATGTTCCACCAAAAAGATTCAAACTTCACTCTCTTCACCTCATTCCAAATG GTGGGCACCTTCTCCCTACTCCACCACCGCCACCGCCATCACCTCCAACGCCAACGGCGACCCTGCAACACCGCCGAAGC TTCTCGTCGTTCAACCCCGTCTCCGCCCCGAAAAGCTCTTTCAGGCCAAGCTCAATGAAGCTCTCTGCCTCGCCAATTCC CTTGAAGAACAGCGTGATGGGTATTTCCATACTGATTTCTTTGATAAGCCTTTGCCCCCTCACCTCCTTGTTCAGAATCC TTCTGTCAAAGGCCATAAGCCTCGTGCAGACACATATTTTGGGCCTGGAACAGTTGATAACATCAAATGCAATCTGAGAG CTGCTGAAGATAAGGATGGTGTGGATGCTGTTTTTGTCAATACTATATTGTCAGGGGTTCAGCAACGAAACCTGGAGAGG GCTTGGGATAAACCTGTGCTGGATCGCGTGGGTCTTATAATAGAGATTTTCAATGCTCATGCATTCACGAAGGAAGCAAA ACTACAGGCTGAACTTGCAGCTCTATCATTCAAGAAAACCAGGCTTGTTCGTGTTCGTGGCCTGGATGGTCGCCTAACAT TTGGTGCTCATGGAGAAACTGAAGTTGTTAGTGCCCGAGGGAGAGGAAGTGGGGGCCAAGGTTTTATGAGTGGTGCTGGA GAAACTGAACTTCAGCTTCAGCGGCGAAGAATCTTAGATAGGAGAAATTATCTATTGACACAAATTGAGGAGGTCCGCCG TACTCGGGCTTTGCAACGTGCTGGTCGGAAGCGGCATGGAGGTTCACTTGGACAAGGCTTAGCCACCGTAGCAGTTGTTG GATATACAAATGCTGGAAAATCTACATTAGTTAGCGAGCTATCAGACAGCGATCTGTATAGTGATTCTCGACTGTTTGCA ACAGTTGATCCTAGAGTAAGAAGTGCTGTTCTTCCTTCAGGGAGGAAAGTGCTTTTAAGCGACACAGTGGGATTTATATC TGATTTGCCTGTACAGTTGGTGGAAGCATTTCATGCAACTTTAGAAGAAGTCGTGGAAGCTGACCTGCTTGTGCATGTGG TGGATTCAAGTGCTCCCAATCTTGATGAGCATCGCTCAACAGTGTTTCAAGTTCTTCAACAAATAGGGGTGTCAGAAGAG AAGCTTCAGAATATGATTGAAGTTTGGAATAAGATTGATATTGAAGAAGAGGGCATGGGTGTTGATGAAGATGAAGAGGC TGATGAAGCTAGCAGCTTCAGTGGAGAGGATGATGAGACTTCTATGATTACAGCAGAAAATGAAGGCACTGAAGAACCCG AATATGTTTGTGAGCGCTCATTGGGTGATTTGGAGGCCGTGGAAGAAAAAGAAGACTATTCTGACGGTTGGTTGTATGAG GACACTTTGGTTAATGAAGATGATTTTTGTTCACCTTCATCTGCAGCTGACCCTCAAAATGAATCCTCTAAGGACAATGT TGTGGAAAAATATAGCTCCATGGGACCGCCGGCTCCACATGTGAAAACGTCTGCCGTTATGGGAGTTGGTTTGCAAGAGT TGCTGGAACTAATAGATGAGAAACTAAGTGCCCAGGATAAGAAGTTGAAGGGCGCACAGGTGGTTGAAAGAAATAATATC TTTCATAAAAAATGGAGGCCCTCTCATACAGAGAATTCTAGCATAGCAGTTGAACAATAG
Protein sequence (LotjaGi1g1v0048900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRTFYANLECSTKKIQTSLSSPHSKWWAPSPYSTTATAITSNANGDPATPPKLLVVQPRLRPEKLFQAKLNEALCLANS LEEQRDGYFHTDFFDKPLPPHLLVQNPSVKGHKPRADTYFGPGTVDNIKCNLRAAEDKDGVDAVFVNTILSGVQQRNLER AWDKPVLDRVGLIIEIFNAHAFTKEAKLQAELAALSFKKTRLVRVRGLDGRLTFGAHGETEVVSARGRGSGGQGFMSGAG ETELQLQRRRILDRRNYLLTQIEEVRRTRALQRAGRKRHGGSLGQGLATVAVVGYTNAGKSTLVSELSDSDLYSDSRLFA TVDPRVRSAVLPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVVDSSAPNLDEHRSTVFQVLQQIGVSEE KLQNMIEVWNKIDIEEEGMGVDEDEEADEASSFSGEDDETSMITAENEGTEEPEYVCERSLGDLEAVEEKEDYSDGWLYE DTLVNEDDFCSPSSAADPQNESSKDNVVEKYSSMGPPAPHVKTSAVMGVGLQELLELIDEKLSAQDKKLKGAQVVERNNI FHKKWRPSHTENSSIAVEQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 21 | 575 | 555 | 1.4E-236 | – | |
| PANTHER | 21 | 575 | 555 | 1.4E-236 | ||
| Gene3D | 102 | 204 | 103 | 5.6E-26 | ||
| TIGRFAM | 107 | 434 | 328 | 2.7E-86 | ||
| Pfam | 108 | 177 | 70 | 1.5E-12 | ||
| Pfam | 180 | 276 | 97 | 5.0E-16 | ||
| CDD | 241 | 429 | 189 | 1.90367E-81 | ||
| SUPERFAMILY | 287 | 417 | 131 | 2.39E-26 | ||
| Gene3D | 287 | 458 | 172 | 1.1E-29 | – | |
| ProSiteProfiles | 288 | 546 | 259 | 54.681 | ||
| PRINTS | 290 | 310 | 21 | 1.5E-6 | ||
| Pfam | 290 | 411 | 122 | 7.2E-16 | ||
| PRINTS | 357 | 375 | 19 | 1.5E-6 | ||
| MobiDBLite | 418 | 445 | 28 | - | – | |
| MobiDBLite | 418 | 454 | 37 | - | – | |
| MobiDBLite | 488 | 520 | 33 | - | – | |
| MobiDBLite | 488 | 509 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0048900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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