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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0051300 |
| Transcript ID | LotjaGi1g1v0051300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent protein kinase, putative; TAIR: AT5G12180.1 calcium-dependent protein kinase 17; Swiss-Prot: sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17; TrEMBL-Plants: tr|G7K320|G7K320_MEDTR Calmodulin-domain kinase CDPK protein; Found in the gene: LotjaGi1g1v0051300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7281017..7283876) extracted from Lotus japonicus Gifu genome v1.2.
TTTTCCTTTTTCTGCTTTGATTTCTCCCTTCCACCATGGGCAACTGTTGCTCAGGTGGTACCAATGACCCTGAGGAAAAG GGAGAAACCAATAACCAAAATAGCACCACCAACAACAATGCAAATGCAGGGGCAGGAACAGAGCACTCTGCCACCACCCC ACCACCATCAACAAAACCATCTCCTCCTCCATCCTCCAAGAATTCCAAGCCTGCCGCGGTTGGCCCGGTTCTCGGAAGGC CAATGGAGGATGTGAGAGCAACCTACAGCATGGGGAAGGAGCTTGGAAGAGGGCAATTTGGTGTGACTCATTTGTGCACA CACAAGGCCACAGGGAAGCAATTTGCCTGCAAAACAATAGCAAAAAGGAAGCTTGTGAACAAGGAGGACATAGAGGATGT GAGGAGGGAGGTGCAGATCATGCACCATCTCACAGGGCAGCCTAACATTGTGGAACTCATTGGTGCCTATGAGGACAAGC AATCTGTTCATCTGGTCATGGAGCTTTGTGCAGGGGGTGAGCTCTTTGATAGGATCATTGCCAAGGGCCATTACACTGAA CGCGCCGCAGCTTCCTTGTTGAGAACCATTGTTCAGATTGTTCACACTTGTCATTCCATGGGGGTGATTCATAGGGATCT TAAGCCTGAGAATTTCCTCTTGTTGAACAAGGATGAGAATGCACCCCTCAAGGCCACAGATTTTGGCCTATCAGTGTTTT ACAAGCAAGGTTTTCTAATTTTTATTATGTCCTTTCTCTTCTGTTTTCTCTCTATTAATTCACATCATAATTATAATCAG AATTCCATGGAAAACATTACATATTTACCATTTTAGAGTCATAGGCAATATGTGTTTAGCATGAAATCATTGACAGGTTA ATTTGTTATTTTCTTTCTCCTTTTTCAATGAAATTCAGCATGTTTTCATACAAGATATCAAGGAGAAGCCATGAACATTT TCTTTGTTTTTTTAGAGTTTTACAATTGAGCAAGGGAAATGGATAAGATTGTGTCATGTATAGCGGTCATTTCTTGACAC CGTAAAAAATCTTACACAAACATCCAATCATATGTTTCTTTTTTTGGCAGTTTCTTAATTTAATTAATTGATGTGACAAA TAGTGAATCCTGATTGGATGATAGTATAAAAAAAATTACATCGTCGGTACATAATTATTGAACTCCAAATTGAAATGAAA TTTTAACACGAAGATTAACCTTTTTTACAGGAGACGTGTTCAAAGATATTGTTGGCAGTGCATATTACATTGCCCCTGAG GTCTTGAAGAGGAAATATGGGCCAGAAGTAGACATATGGAGCATTGGTGTTATGTTATACATTCTTCTGTCTGGTGTTCC TCCATTTTGGGCAGGTTCATATTCATTCACTCAACTTCAAAGCTATTTCTAAATTATCTATCGTTTATAGAGCTTAAATA GAACAAGAAAAGGATTCCTCTAGAATCTAGTGTATCTGCATAATATCTGCATAACTTGAAACTGAAACCAAGGCTTGGTT TGACAGAATCTGAAAATGGAATATTCAATGCTATCCTTCGAGGCCACATTGACTTCACTAGCGATCCATGGCCCTCACTT TCACCTGCAGCAAAAGATCTTGTGAGGAAAATGTTGAACTCAGATCCCAAGCAGAGGCTAACAGCACATGAAGTTCTAAG TATATATATTCATTGACTTCCTTTCTATGAACAACTTAAGTTCAATTTCTTTTACATTAATTACAAATACAAATGAATCT TTTGAGTTCAATGGAATCATAACAAAGCATTTCTAATGAAAAACATAGATCATCCATGGATCAAGGAGGATGGAGAAGCA CCAGATAAACCACTTGACAATGCAGTGCTGAATAGGCTCAAACAGTTCAAAGCAATGAACCAATTCAAGAAAGTTGCTCT AAGGGTAATGCTACTTTGACTTAATTTCTTTTGTTCATTTTGGATAAATCATTTAGTGAAATTGTATAAATTAAGCAGTA TGTTTAAATTTACACATGGTTAGGTCATTGCTGGTTGCCTATCCGAGGAAGAAATTATGGGGTTGAAGCAGATGTTCAAG GGGATGGATGAGGACAACAGTGGAACCATCACAATAGAAGAGCTCAAGCAAGGACTTGCAAAACAAGGAACAAAACTGAC AGAGCAAGAAGTTAAGCAATTAATGGAAGCTGTAAGTTTCTCTCTCCTTCATTTTTGCATGCTCAAAAGTATCTTCTCCA CTACAAACTACTAAGATGGTTTTTCTTTATTCTTCTGCAAAATGCAGGCAGATGCTGATGGTAATGGAACCATAGATTAC GACGAGTTCATCACAGCAACGATGCACATGAACCGGATGAACAAAGAAGAACATCTTTATACTGCTTTCCAATACTTCGA TAAAGATAACAGCGGGTAAAGAAATAAAACAAAATCAACTAGATTGAACATATATTTGCCACTCCTGAAACTAATTGGTG TTGAAGGTTCTAATTTCACTGCTTTGCCATGAATCAGGTACATTACCATTGAAGAACTAGAGCAAGCTCTCCACGAGTTC AACATGCATGATGGCCGGGACATCAAGGAAATCATTTCAGAAGTTGATGCCGATAACGTAAGCCCTGAACTGAATAAATT ACATTTACATGTATTGTTGAAGTTCTAACATGAAAAAAAATCTTACACATATGGTTAGTATACTGTACAGCAGATTTGAG TGTTGATTTTGAAAAATAATGAGGAAACTTGCATGTCTCTACAGGATGGCCGGATTAACTATGATGAGTTTGCTGCGATG ATGAGTAAAGGAAACCCAGAAGCTTTTACTAAGAAGAGGCGTGATTCAACCTTGTATTAG
CDS sequence (LotjaGi1g1v0051300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAACTGTTGCTCAGGTGGTACCAATGACCCTGAGGAAAAGGGAGAAACCAATAACCAAAATAGCACCACCAACAA CAATGCAAATGCAGGGGCAGGAACAGAGCACTCTGCCACCACCCCACCACCATCAACAAAACCATCTCCTCCTCCATCCT CCAAGAATTCCAAGCCTGCCGCGGTTGGCCCGGTTCTCGGAAGGCCAATGGAGGATGTGAGAGCAACCTACAGCATGGGG AAGGAGCTTGGAAGAGGGCAATTTGGTGTGACTCATTTGTGCACACACAAGGCCACAGGGAAGCAATTTGCCTGCAAAAC AATAGCAAAAAGGAAGCTTGTGAACAAGGAGGACATAGAGGATGTGAGGAGGGAGGTGCAGATCATGCACCATCTCACAG GGCAGCCTAACATTGTGGAACTCATTGGTGCCTATGAGGACAAGCAATCTGTTCATCTGGTCATGGAGCTTTGTGCAGGG GGTGAGCTCTTTGATAGGATCATTGCCAAGGGCCATTACACTGAACGCGCCGCAGCTTCCTTGTTGAGAACCATTGTTCA GATTGTTCACACTTGTCATTCCATGGGGGTGATTCATAGGGATCTTAAGCCTGAGAATTTCCTCTTGTTGAACAAGGATG AGAATGCACCCCTCAAGGCCACAGATTTTGGCCTATCAGTGTTTTACAAGCAAGGAGACGTGTTCAAAGATATTGTTGGC AGTGCATATTACATTGCCCCTGAGGTCTTGAAGAGGAAATATGGGCCAGAAGTAGACATATGGAGCATTGGTGTTATGTT ATACATTCTTCTGTCTGGTGTTCCTCCATTTTGGGCAGAATCTGAAAATGGAATATTCAATGCTATCCTTCGAGGCCACA TTGACTTCACTAGCGATCCATGGCCCTCACTTTCACCTGCAGCAAAAGATCTTGTGAGGAAAATGTTGAACTCAGATCCC AAGCAGAGGCTAACAGCACATGAAGTTCTAAATCATCCATGGATCAAGGAGGATGGAGAAGCACCAGATAAACCACTTGA CAATGCAGTGCTGAATAGGCTCAAACAGTTCAAAGCAATGAACCAATTCAAGAAAGTTGCTCTAAGGGTCATTGCTGGTT GCCTATCCGAGGAAGAAATTATGGGGTTGAAGCAGATGTTCAAGGGGATGGATGAGGACAACAGTGGAACCATCACAATA GAAGAGCTCAAGCAAGGACTTGCAAAACAAGGAACAAAACTGACAGAGCAAGAAGTTAAGCAATTAATGGAAGCTGCAGA TGCTGATGGTAATGGAACCATAGATTACGACGAGTTCATCACAGCAACGATGCACATGAACCGGATGAACAAAGAAGAAC ATCTTTATACTGCTTTCCAATACTTCGATAAAGATAACAGCGGGTACATTACCATTGAAGAACTAGAGCAAGCTCTCCAC GAGTTCAACATGCATGATGGCCGGGACATCAAGGAAATCATTTCAGAAGTTGATGCCGATAACGATGGCCGGATTAACTA TGATGAGTTTGCTGCGATGATGAGTAAAGGAAACCCAGAAGCTTTTACTAAGAAGAGGCGTGATTCAACCTTGTATTAG
Protein sequence (LotjaGi1g1v0051300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNCCSGGTNDPEEKGETNNQNSTTNNNANAGAGTEHSATTPPPSTKPSPPPSSKNSKPAAVGPVLGRPMEDVRATYSMG KELGRGQFGVTHLCTHKATGKQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELIGAYEDKQSVHLVMELCAG GELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGDVFKDIVG SAYYIAPEVLKRKYGPEVDIWSIGVMLYILLSGVPPFWAESENGIFNAILRGHIDFTSDPWPSLSPAAKDLVRKMLNSDP KQRLTAHEVLNHPWIKEDGEAPDKPLDNAVLNRLKQFKAMNQFKKVALRVIAGCLSEEEIMGLKQMFKGMDEDNSGTITI EELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNKEEHLYTAFQYFDKDNSGYITIEELEQALH EFNMHDGRDIKEIISEVDADNDGRINYDEFAAMMSKGNPEAFTKKRRDSTLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 69 | 69 | - | – | |
| MobiDBLite | 1 | 42 | 42 | - | – | |
| PANTHER | 3 | 523 | 521 | 0.0 | – | |
| PANTHER | 3 | 523 | 521 | 0.0 | – | |
| MobiDBLite | 43 | 57 | 15 | - | – | |
| SUPERFAMILY | 54 | 362 | 309 | 4.99E-87 | ||
| SMART | 77 | 335 | 259 | 2.6E-99 | ||
| Pfam | 77 | 335 | 259 | 4.2E-76 | ||
| ProSiteProfiles | 77 | 335 | 259 | 48.598 | ||
| CDD | 77 | 334 | 258 | 1.60861E-138 | – | |
| Gene3D | 77 | 160 | 84 | 5.4E-169 | – | |
| ProSitePatterns | 83 | 110 | 28 | - | ||
| Gene3D | 161 | 339 | 179 | 5.4E-169 | – | |
| ProSitePatterns | 197 | 209 | 13 | - | ||
| Gene3D | 340 | 513 | 174 | 5.4E-169 | – | |
| SUPERFAMILY | 375 | 515 | 141 | 1.87E-46 | ||
| ProSiteProfiles | 378 | 413 | 36 | 13.844 | ||
| SMART | 382 | 410 | 29 | 2.4E-4 | ||
| Pfam | 383 | 443 | 61 | 3.6E-12 | ||
| ProSitePatterns | 391 | 403 | 13 | - | ||
| ProSiteProfiles | 414 | 449 | 36 | 12.979 | ||
| SMART | 418 | 446 | 29 | 1.9E-5 | ||
| ProSitePatterns | 427 | 439 | 13 | - | ||
| ProSiteProfiles | 450 | 485 | 36 | 15.099 | ||
| Pfam | 452 | 515 | 64 | 6.2E-14 | ||
| SMART | 454 | 482 | 29 | 0.0074 | ||
| ProSitePatterns | 463 | 475 | 13 | - | ||
| SMART | 489 | 517 | 29 | 7.0E-7 | ||
| ProSiteProfiles | 489 | 520 | 32 | 12.226 | ||
| ProSitePatterns | 498 | 510 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0051300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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