Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0051700 |
| Transcript ID | LotjaGi1g1v0051700.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dihydropyrimidinase; TAIR: AT5G12200.1 pyrimidine 2; Swiss-Prot: sp|Q9FMP3|DPYS_ARATH Dihydropyrimidinase; TrEMBL-Plants: tr|A0A151T7P5|A0A151T7P5_CAJCA Dihydropyrimidinase; Found in the gene: LotjaGi1g1v0051700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7293424..7298652) extracted from Lotus japonicus Gifu genome v1.2.
TTCACTTCGTATCTCTTCTTCTCTCTTCTTCTCTTCTGCTTCCTTATCATCACTCCCTCTTCACTCTCACAACCAAACAA CAACCAGGTACCTACATCATCAGAGTTGACTTTCACTTCACCTCAATCGTTGACTTCATTCTAGGTTTTCAATTTCTCAA TTTCCCCATTTTTCTTTCAGTTCTGTGAAGCTGGAATTGGACACACTGAATCTTCATGCGGAACTGGAACCCCATCATCA TCCAAGTTGCTGATCAAGGGTGGCACCGTCGTCAATGCTCATCACCAACACGTTGCTGATGTTTACATCGAAGATGGCAT CATCGTTGCTGTTAATCCAACCATCAACGTTGGAGATGAAATCAAAGTGATCGATGCCACCGGGAAGTTCATCATGCCCG GTTAGTTAGCCCAATCTTTTATGGTTATCACAATCATGGTCATCATAATTTGTTTGGCAATTGGCATACTCTGAAAATGC ATATTTTTTTCTCTGGGAAATGAGTGTCTGACACCCAGATAGATGATTGATGTGATATATGATATGATGTGATCGGAAGA AAGGGATAAAGAGAAAAATGGGGTATAAGTGAGGCGGAGCGGAGGTGTTTGTACTATTTGTGTGTTTGAAAATCGGGATT GTTTTTCTCGACTTACAGTGGGTGTACTGTGTAGACACCCCAAATGTAATTGAGTGAAAGGAAGAGAAGAGAGATAAGTG ATACATGTGATCTGACACGAAGAAATAGATAGAATGAAAAATTGGGTTTGTATAAGGTGTCTATGTTGTCTAGGTTCTTA AAAATCAGGATTGTTTTTCTTGACTTACAGGGGGCATTGATCCTCATACCCACCTGGAGTTTGAGTTTATGAATACTGTG ACAGTAGATGACTTCTTCAGTGGTCAAGCTGCAGCATTAGCTGGCGGGACAACTATGCACATTGACTTCGTTATACCGCT TAATGGGAGTTTAACGGCTGGGTTTGAAGCGTATGAAAAGAAGGCGAAGAAGGCTTGCATGGATTATGGGTTCCATATGG CTGTCACCAAGTGGGATGAAACTGTTTCGAGAGAAATGGAAATCATGGTCAAGGAGAAAGGTTGTAATCTATTCCCTTGT TGCGTTTTGAATTGGGAAATGGGTTGATTATGCAGCAATAACCATTTGTGTTTTGTAATTGCAGGTATCAACTCCTTTAA GTTTTTCATGGCATACAAAGGAGCTCTCATGATCAATGATGAGCTTCTTCTGGAAGCATTTAAAAAATGCAAGTCCCTTG GCGCCTTAGCCATGGTCCATGCAGAAAATGGAGATGCTGTGTATGAAGGTCAAAATAGAATGATTGAGCTTGGAATAACA GGTCCTGAGGGGCATGCTCTTTCAAGGCCTGCAGTGGTAAATTCTCAAATTTGTTCTTCCATAAAGAATTCACTGAATAA TGGAATTGAAATATTGATCATGGCTGCTTTCATTCCATCTTCTCCATTGTCATAAGAAGCCATAGCATACACAATTTTCA CTTGTTACTCAAGTCAAATAAAACTGCTTTTAGCTGCTAGTGTCAAATTTCACACACTTGTAACCAGACTTGGTTGACAT TTGTCGTGTTCAGTTTACATCTGTTTTGATAAACCACATTTGGTTAATATGTGATGGTTTGATTACTGTGAGGTCTAAAT TTCTGTCTGTGTGATTTATAGAACATTTACCTATTGGACTTGGGTTCCTGTGTAGTTGGAAGGAGAGGCAACTGCCCGTG CTATTCGCTTAGCAGATTTTGTAAACACTCCTTTGTATGTGGTTCATGTAATGAGCATTGATGCAATGGAAGAAATTGCA AAGGCCCGCAAATCAGGTTCTTAACTTGAATTCTTGTAGTGTTATTCTTTATTTTCATTAATGTTAGCGGGGAGGTGACT CTTGCAAATGATATAAGTGGACAACTCTTTAGTATATGTGTATAAATGTAGTATAAAACCATTCACATGTTTTCACCCAA CTCAACAGCTTAAACTTTTGAGACAGTTGGTTTATATGGTATAAATGCATGACTCTGAAGTACAATCATTGTTGCCCCTC ATTAGTCTTATGAAAAGTTGAAATTTAGTACAAGGTAGGTGGATTTGTGCTTTGTCCACGCTTCAAGCCCAATGAGATCT TGCGTGAGGGGGCATGTTACAAATATAATATAAATCATTCATGTGTAATGTGTCTTCTTCACCAAAAAGCTTAAGTTGTT ATAATAGTTGGTTTATGACACTTTAATTATATTTTACAGACTTGTATGATAGTCATACTTGTCTTATTCTATGACCAATG CCCTGTTTTACTTTTTTTTTTTCACGTGTCCATGATGAATTAAAGTATCTTTGTTGGTGGAAAATTAATTCCTTCTTGCC ATAAAGATGGATTAAATTTATAAATCATGCTTCATCCTCACTTTCAAGCTCATAAATTTGTTCATATTCATTCTATGAAC TAAACACAGTACAAGTGAATTGGATTGATGTCCTTATTGTTTACATATAATTGATGTGTTTCAAGTGTGACATTTTAAGT TTTATTGATAGCTTAGTTTTTACGAGCTTCCCTGCTTTTGAAACTTCAAAACAGAGGATTAGTTTATATGTTTCCTCTGA CATTTTAATTGTTTTTGTTCCCTAATAATTTTGTTTTAGTAAGGTCACCTGTTTGCTTTCATACTGCAGGACAACGGGTA ATTGGAGAGCCTGTTGCCTCTGGGTTAGCCCTTGATGAATCTTGGCTTTGGCATCCTGACTTTGAGACTGCAGCAAGGCA AGGGCCTTCACTTGTTTCATTGTTTTCTGTCGTTGTTGGTGTTGTGTTGTTTTTTGTCTGTTGTATTCAGTTTTAAGAAT ATAAACCATATTCCATCTTATGTTTCAGGTATGTCATGAGTCCCCCTATTAGAAAACGAGGACATGATAAGGCCCTTCAA GCAGCCCTATCAACAGGAGTTTTGCAGGTTTCACATTATGAGTTAGTCTTAAGTTCACTAATCATTTAAAGATAAGGGCT CGAGTTTGTGGAAGTAGTTAGGCCTTTGCCCTGGCATGCATCCTAACACTTGTTTCTATTTATAATCTCTATATTATTGT TAATACCTCACATTGACTAGAGACATGTCCAACATAGTTCTTATAAAAGGCTTTGACAATTCTCACCTTACAAGCTAGCT TTTGGGATTTAGACTTGGCCTGATTCTAAGATGATATCCGAGCATGTCCTAGATCTGATATTGGATTCTAAATTCGGCCA CCCTGGGATGCCTTTGTTGCATGCAGCTGTTAGTTCTATAAACTTCACGCTCCAGATGTTCAATTTTGTGCACGAGGGGT GTATTAAAATCCCACGTTGACTAGAGATATGACCAAAGTAATCTTTAACTCCTTATTAAAGGCTTTGGCAAAATCCTTAC CTTACAAGCTAGCTTTTGGGGTTGAGTTAGGTTGAGCCCAAGTTCTAAGAATTACCATTGCCTTGAGCCCAATTTTATTC TCTTTACTAGGATCGTTTATTTGACTAAAGGGTACCTTTTACAAATTTGCAGCTGGTAGGAACTGATCATTGTGCCTTTA ATTCCACCCAGAAAGCTTTTGGAATTGATGACTTCCGGAAAATTCCTAATGGTGTCAATGGTAATCACATAATGATCCTG GATATTTGTGGCCTAAATACATTGTGGTTGGTTTTAAAATGTTTCCTTACTAATATGCAATGCAATCCAAAATCTGTAGG CATTGAAGAAAGGATGCATATAGTATGGGATATCATGGTGGTAAGATAATAAATTTCCAGCTTCTCCTTTGCTCTCTTGA TAGATTGGGGTGAAATGGAGGAGAGGAAGATGATAACCTTCTAACTAGAGTTTATGGTTATACATCTCAGGATTCTGGCC AGATATCTGTCACTGACTATGTCCGGGTGACCAGCACCGAATGGTATATTTTCTGTTAATCAAAGTAAAATTGCCATCCA GTTCTTATGATAATAAAAAGGAGTTCATAGTATTATTTATTATTATTATTTGAAAAGTCTATTTGACAAAGATGCCAAAA ATTGTGAATGACTTTTTTTTGCTTTTGTTTATGCATTCATTTCAGTGCTAAAGTCTTCAATATATATCCAAAGAAAGGAG CTATTCTTCCAGGATCTGATGCAGACATTATCATCCTCAATCCAAATTCAAGCTTTGAGATAACTGTGAAGTCACACCAC TCCAGGCTGGACACAAACGTCTATGAGGGAAGAAGGGGAAAGGTACTGATTTAGCTATAATATGGTCCATTTAGGGATGG AAGTTAATTAACTGCTTAGTGACAAAATGAGCAGTGAGCACGAAACAGATCTCCATGTCTTGACCTACTATGGGGTTTTC ACCCATTTCTCTTAAGTTCTCTCTGGGCTTCTGGTATGATGACTTGACTTAAGGAAATTTTTTTTTTAAATTAATCTTGT GCTATTTCAGGTAGTCAGGTACAAATGGTATATTACTTTATTGTAAAGTAAGAATTTGTATACAGTCCTATTCAATTAAA GGCATGTTGTTGATCTGGCTGTGTTGAGTTCTGAATTAGGTAGTGCACACTGGTTTTGCATATCGTAAAACACAATTGTT AATGGCTTAACATTTGACTGCTAAAATTAATTCCAGATTTAAGCAGATTCTTTGTTAATAATTTTATATTGCGGACATTT TCTATTGGCTATCATTGGGAAATAACAAGTTATTCTTAACAAGTCACACTGCATCTTGAATTGCACTTGGGCACTGCACT GCAAATAGCATTGACTGGGCTAATCTAGGCTTTGTTTGCTAAAGCATATCACTAAGTGTGTGTGTGTGTGTCTGGGCAGA GTCTCTCACGGCCCATTGACTGATTTGTTCATGCTTTGTTCTTTTACCTTTTTTTGTGTCTTATGGCTCCATTCAACACA TGCTTGTTGTATTTTGTTCAATAATTGAAGCCTTGTCGTGTGATATCACGATTCAAACTATAATTATCTTATTTCAGGGC AAAGTTGAAGTGACTATAGCAGGAGGAAGAATTGTTTGGGAAAACAATGAACTGAAGGTTGCTCCTGGTACTGGAAAATA CATAAAAACGCCTCCTTTTAATTATCTATTTGATGGACTGGACAAGAAAGATGCCAGTTATCTGAATTCCCTTCAAGCCC CAGTAAAGCGAGCCAAATCCACCATTTAA
CDS sequence (LotjaGi1g1v0051700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCGGGGGCATTGATCCTCATACCCACCTGGAGTTTGAGTTTATGAATACTGTGACAGTAGATGACTTCTTCAGTGG TCAAGCTGCAGCATTAGCTGGCGGGACAACTATGCACATTGACTTCGTTATACCGCTTAATGGGAGTTTAACGGCTGGGT TTGAAGCGTATGAAAAGAAGGCGAAGAAGGCTTGCATGGATTATGGGTTCCATATGGCTGTCACCAAGTGGGATGAAACT GTTTCGAGAGAAATGGAAATCATGGTCAAGGAGAAAGGTATCAACTCCTTTAAGTTTTTCATGGCATACAAAGGAGCTCT CATGATCAATGATGAGCTTCTTCTGGAAGCATTTAAAAAATGCAAGTCCCTTGGCGCCTTAGCCATGGTCCATGCAGAAA ATGGAGATGCTGTGTATGAAGGTCAAAATAGAATGATTGAGCTTGGAATAACAGGTCCTGAGGGGCATGCTCTTTCAAGG CCTGCAGTGTTGGAAGGAGAGGCAACTGCCCGTGCTATTCGCTTAGCAGATTTTGTAAACACTCCTTTGTATGTGGTTCA TGTAATGAGCATTGATGCAATGGAAGAAATTGCAAAGGCCCGCAAATCAGGACAACGGGTAATTGGAGAGCCTGTTGCCT CTGGGTTAGCCCTTGATGAATCTTGGCTTTGGCATCCTGACTTTGAGACTGCAGCAAGGTATGTCATGAGTCCCCCTATT AGAAAACGAGGACATGATAAGGCCCTTCAAGCAGCCCTATCAACAGGAGTTTTGCAGCTGGTAGGAACTGATCATTGTGC CTTTAATTCCACCCAGAAAGCTTTTGGAATTGATGACTTCCGGAAAATTCCTAATGGTGTCAATGGCATTGAAGAAAGGA TGCATATAGTATGGGATATCATGGTGGTAAGATATGCTAAAGTCTTCAATATATATCCAAAGAAAGGAGCTATTCTTCCA GGATCTGATGCAGACATTATCATCCTCAATCCAAATTCAAGCTTTGAGATAACTGTGAAGTCACACCACTCCAGGCTGGA CACAAACGTCTATGAGGGAAGAAGGGGAAAGGGCAAAGTTGAAGTGACTATAGCAGGAGGAAGAATTGTTTGGGAAAACA ATGAACTGAAGGTTGCTCCTGGTACTGGAAAATACATAAAAACGCCTCCTTTTAATTATCTATTTGATGGACTGGACAAG AAAGATGCCAGTTATCTGAATTCCCTTCAAGCCCCAGTAAAGCGAGCCAAATCCACCATTTAA
Protein sequence (LotjaGi1g1v0051700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPGGIDPHTHLEFEFMNTVTVDDFFSGQAAALAGGTTMHIDFVIPLNGSLTAGFEAYEKKAKKACMDYGFHMAVTKWDET VSREMEIMVKEKGINSFKFFMAYKGALMINDELLLEAFKKCKSLGALAMVHAENGDAVYEGQNRMIELGITGPEGHALSR PAVLEGEATARAIRLADFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPVASGLALDESWLWHPDFETAARYVMSPPI RKRGHDKALQAALSTGVLQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHIVWDIMVVRYAKVFNIYPKKGAILP GSDADIIILNPNSSFEITVKSHHSRLDTNVYEGRRGKGKVEVTIAGGRIVWENNELKVAPGTGKYIKTPPFNYLFDGLDK KDASYLNSLQAPVKRAKSTI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 406 | 406 | 1.1E-204 | – | |
| PANTHER | 1 | 406 | 406 | 1.1E-204 | – | |
| Pfam | 1 | 370 | 370 | 1.3E-19 | ||
| Gene3D | 1 | 396 | 396 | 4.7E-152 | ||
| CDD | 1 | 383 | 383 | 0.0 | ||
| TIGRFAM | 1 | 387 | 387 | 2.1E-160 | ||
| Gene3D | 3 | 357 | 355 | 4.7E-152 | – | |
| SUPERFAMILY | 3 | 316 | 314 | 9.93E-90 | ||
| SUPERFAMILY | 290 | 392 | 103 | 1.84E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds. |
Expression pattern of LotjaGi1g1v0051700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…