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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0051700 |
| Transcript ID | LotjaGi1g1v0051700.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dihydropyrimidinase; TAIR: AT5G12200.1 pyrimidine 2; Swiss-Prot: sp|Q9FMP3|DPYS_ARATH Dihydropyrimidinase; TrEMBL-Plants: tr|G7K315|G7K315_MEDTR Dihydropyrimidinase; Found in the gene: LotjaGi1g1v0051700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7293424..7298682) extracted from Lotus japonicus Gifu genome v1.2.
ATGCAGCTGAATTGCAGTGAAGCAATGGTGTTCACTTCGTATCTCTTCTTCTCTCTTCTTCTCTTCTGCTTCCTTATCAT CACTCCCTCTTCACTCTCACAACCAAACAACAACCAGGTACCTACATCATCAGAGTTGACTTTCACTTCACCTCAATCGT TGACTTCATTCTAGGTTTTCAATTTCTCAATTTCCCCATTTTTCTTTCAGTTCTGTGAAGCTGGAATTGGACACACTGAA TCTTCATGCGGAACTGGAACCCCATCATCATCCAAGTTGCTGATCAAGGGTGGCACCGTCGTCAATGCTCATCACCAACA CGTTGCTGATGTTTACATCGAAGATGGCATCATCGTTGCTGTTAATCCAACCATCAACGTTGGAGATGAAATCAAAGTGA TCGATGCCACCGGGAAGTTCATCATGCCCGGTTAGTTAGCCCAATCTTTTATGGTTATCACAATCATGGTCATCATAATT TGTTTGGCAATTGGCATACTCTGAAAATGCATATTTTTTTCTCTGGGAAATGAGTGTCTGACACCCAGATAGATGATTGA TGTGATATATGATATGATGTGATCGGAAGAAAGGGATAAAGAGAAAAATGGGGTATAAGTGAGGCGGAGCGGAGGTGTTT GTACTATTTGTGTGTTTGAAAATCGGGATTGTTTTTCTCGACTTACAGTGGGTGTACTGTGTAGACACCCCAAATGTAAT TGAGTGAAAGGAAGAGAAGAGAGATAAGTGATACATGTGATCTGACACGAAGAAATAGATAGAATGAAAAATTGGGTTTG TATAAGGTGTCTATGTTGTCTAGGTTCTTAAAAATCAGGATTGTTTTTCTTGACTTACAGGGGGCATTGATCCTCATACC CACCTGGAGTTTGAGTTTATGAATACTGTGACAGTAGATGACTTCTTCAGTGGTCAAGCTGCAGCATTAGCTGGCGGGAC AACTATGCACATTGACTTCGTTATACCGCTTAATGGGAGTTTAACGGCTGGGTTTGAAGCGTATGAAAAGAAGGCGAAGA AGGCTTGCATGGATTATGGGTTCCATATGGCTGTCACCAAGTGGGATGAAACTGTTTCGAGAGAAATGGAAATCATGGTC AAGGAGAAAGGTTGTAATCTATTCCCTTGTTGCGTTTTGAATTGGGAAATGGGTTGATTATGCAGCAATAACCATTTGTG TTTTGTAATTGCAGGTATCAACTCCTTTAAGTTTTTCATGGCATACAAAGGAGCTCTCATGATCAATGATGAGCTTCTTC TGGAAGCATTTAAAAAATGCAAGTCCCTTGGCGCCTTAGCCATGGTCCATGCAGAAAATGGAGATGCTGTGTATGAAGGT CAAAATAGAATGATTGAGCTTGGAATAACAGGTCCTGAGGGGCATGCTCTTTCAAGGCCTGCAGTGGTAAATTCTCAAAT TTGTTCTTCCATAAAGAATTCACTGAATAATGGAATTGAAATATTGATCATGGCTGCTTTCATTCCATCTTCTCCATTGT CATAAGAAGCCATAGCATACACAATTTTCACTTGTTACTCAAGTCAAATAAAACTGCTTTTAGCTGCTAGTGTCAAATTT CACACACTTGTAACCAGACTTGGTTGACATTTGTCGTGTTCAGTTTACATCTGTTTTGATAAACCACATTTGGTTAATAT GTGATGGTTTGATTACTGTGAGGTCTAAATTTCTGTCTGTGTGATTTATAGAACATTTACCTATTGGACTTGGGTTCCTG TGTAGTTGGAAGGAGAGGCAACTGCCCGTGCTATTCGCTTAGCAGATTTTGTAAACACTCCTTTGTATGTGGTTCATGTA ATGAGCATTGATGCAATGGAAGAAATTGCAAAGGCCCGCAAATCAGGTTCTTAACTTGAATTCTTGTAGTGTTATTCTTT ATTTTCATTAATGTTAGCGGGGAGGTGACTCTTGCAAATGATATAAGTGGACAACTCTTTAGTATATGTGTATAAATGTA GTATAAAACCATTCACATGTTTTCACCCAACTCAACAGCTTAAACTTTTGAGACAGTTGGTTTATATGGTATAAATGCAT GACTCTGAAGTACAATCATTGTTGCCCCTCATTAGTCTTATGAAAAGTTGAAATTTAGTACAAGGTAGGTGGATTTGTGC TTTGTCCACGCTTCAAGCCCAATGAGATCTTGCGTGAGGGGGCATGTTACAAATATAATATAAATCATTCATGTGTAATG TGTCTTCTTCACCAAAAAGCTTAAGTTGTTATAATAGTTGGTTTATGACACTTTAATTATATTTTACAGACTTGTATGAT AGTCATACTTGTCTTATTCTATGACCAATGCCCTGTTTTACTTTTTTTTTTTCACGTGTCCATGATGAATTAAAGTATCT TTGTTGGTGGAAAATTAATTCCTTCTTGCCATAAAGATGGATTAAATTTATAAATCATGCTTCATCCTCACTTTCAAGCT CATAAATTTGTTCATATTCATTCTATGAACTAAACACAGTACAAGTGAATTGGATTGATGTCCTTATTGTTTACATATAA TTGATGTGTTTCAAGTGTGACATTTTAAGTTTTATTGATAGCTTAGTTTTTACGAGCTTCCCTGCTTTTGAAACTTCAAA ACAGAGGATTAGTTTATATGTTTCCTCTGACATTTTAATTGTTTTTGTTCCCTAATAATTTTGTTTTAGTAAGGTCACCT GTTTGCTTTCATACTGCAGGACAACGGGTAATTGGAGAGCCTGTTGCCTCTGGGTTAGCCCTTGATGAATCTTGGCTTTG GCATCCTGACTTTGAGACTGCAGCAAGGCAAGGGCCTTCACTTGTTTCATTGTTTTCTGTCGTTGTTGGTGTTGTGTTGT TTTTTGTCTGTTGTATTCAGTTTTAAGAATATAAACCATATTCCATCTTATGTTTCAGGTATGTCATGAGTCCCCCTATT AGAAAACGAGGACATGATAAGGCCCTTCAAGCAGCCCTATCAACAGGAGTTTTGCAGGTTTCACATTATGAGTTAGTCTT AAGTTCACTAATCATTTAAAGATAAGGGCTCGAGTTTGTGGAAGTAGTTAGGCCTTTGCCCTGGCATGCATCCTAACACT TGTTTCTATTTATAATCTCTATATTATTGTTAATACCTCACATTGACTAGAGACATGTCCAACATAGTTCTTATAAAAGG CTTTGACAATTCTCACCTTACAAGCTAGCTTTTGGGATTTAGACTTGGCCTGATTCTAAGATGATATCCGAGCATGTCCT AGATCTGATATTGGATTCTAAATTCGGCCACCCTGGGATGCCTTTGTTGCATGCAGCTGTTAGTTCTATAAACTTCACGC TCCAGATGTTCAATTTTGTGCACGAGGGGTGTATTAAAATCCCACGTTGACTAGAGATATGACCAAAGTAATCTTTAACT CCTTATTAAAGGCTTTGGCAAAATCCTTACCTTACAAGCTAGCTTTTGGGGTTGAGTTAGGTTGAGCCCAAGTTCTAAGA ATTACCATTGCCTTGAGCCCAATTTTATTCTCTTTACTAGGATCGTTTATTTGACTAAAGGGTACCTTTTACAAATTTGC AGCTGGTAGGAACTGATCATTGTGCCTTTAATTCCACCCAGAAAGCTTTTGGAATTGATGACTTCCGGAAAATTCCTAAT GGTGTCAATGGTAATCACATAATGATCCTGGATATTTGTGGCCTAAATACATTGTGGTTGGTTTTAAAATGTTTCCTTAC TAATATGCAATGCAATCCAAAATCTGTAGGCATTGAAGAAAGGATGCATATAGTATGGGATATCATGGTGGTAAGATAAT AAATTTCCAGCTTCTCCTTTGCTCTCTTGATAGATTGGGGTGAAATGGAGGAGAGGAAGATGATAACCTTCTAACTAGAG TTTATGGTTATACATCTCAGGATTCTGGCCAGATATCTGTCACTGACTATGTCCGGGTGACCAGCACCGAATGGTATATT TTCTGTTAATCAAAGTAAAATTGCCATCCAGTTCTTATGATAATAAAAAGGAGTTCATAGTATTATTTATTATTATTATT TGAAAAGTCTATTTGACAAAGATGCCAAAAATTGTGAATGACTTTTTTTTGCTTTTGTTTATGCATTCATTTCAGTGCTA AAGTCTTCAATATATATCCAAAGAAAGGAGCTATTCTTCCAGGATCTGATGCAGACATTATCATCCTCAATCCAAATTCA AGCTTTGAGATAACTGTGAAGTCACACCACTCCAGGCTGGACACAAACGTCTATGAGGGAAGAAGGGGAAAGGTACTGAT TTAGCTATAATATGGTCCATTTAGGGATGGAAGTTAATTAACTGCTTAGTGACAAAATGAGCAGTGAGCACGAAACAGAT CTCCATGTCTTGACCTACTATGGGGTTTTCACCCATTTCTCTTAAGTTCTCTCTGGGCTTCTGGTATGATGACTTGACTT AAGGAAATTTTTTTTTTAAATTAATCTTGTGCTATTTCAGGTAGTCAGGTACAAATGGTATATTACTTTATTGTAAAGTA AGAATTTGTATACAGTCCTATTCAATTAAAGGCATGTTGTTGATCTGGCTGTGTTGAGTTCTGAATTAGGTAGTGCACAC TGGTTTTGCATATCGTAAAACACAATTGTTAATGGCTTAACATTTGACTGCTAAAATTAATTCCAGATTTAAGCAGATTC TTTGTTAATAATTTTATATTGCGGACATTTTCTATTGGCTATCATTGGGAAATAACAAGTTATTCTTAACAAGTCACACT GCATCTTGAATTGCACTTGGGCACTGCACTGCAAATAGCATTGACTGGGCTAATCTAGGCTTTGTTTGCTAAAGCATATC ACTAAGTGTGTGTGTGTGTGTCTGGGCAGAGTCTCTCACGGCCCATTGACTGATTTGTTCATGCTTTGTTCTTTTACCTT TTTTTGTGTCTTATGGCTCCATTCAACACATGCTTGTTGTATTTTGTTCAATAATTGAAGCCTTGTCGTGTGATATCACG ATTCAAACTATAATTATCTTATTTCAGGGCAAAGTTGAAGTGACTATAGCAGGAGGAAGAATTGTTTGGGAAAACAATGA ACTGAAGGTTGCTCCTGGTACTGGAAAATACATAAAAACGCCTCCTTTTAATTATCTATTTGATGGACTGGACAAGAAAG ATGCCAGTTATCTGAATTCCCTTCAAGCCCCAGTAAAGCGAGCCAAATCCACCATTTAA
CDS sequence (LotjaGi1g1v0051700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGCTGAATTGCAGTGAAGCAATGGTTTTCAATTTCTCAATTTCCCCATTTTTCTTTCAGTTCTGTGAAGCTGGAAT TGGACACACTGAATCTTCATGCGGAACTGGAACCCCATCATCATCCAAGTTGCTGATCAAGGGTGGCACCGTCGTCAATG CTCATCACCAACACGTTGCTGATGTTTACATCGAAGATGGCATCATCGTTGCTGTTAATCCAACCATCAACGTTGGAGAT GAAATCAAAGTGATCGATGCCACCGGGAAGTTCATCATGCCCGGGGGCATTGATCCTCATACCCACCTGGAGTTTGAGTT TATGAATACTGTGACAGTAGATGACTTCTTCAGTGGTCAAGCTGCAGCATTAGCTGGCGGGACAACTATGCACATTGACT TCGTTATACCGCTTAATGGGAGTTTAACGGCTGGGTTTGAAGCGTATGAAAAGAAGGCGAAGAAGGCTTGCATGGATTAT GGGTTCCATATGGCTGTCACCAAGTGGGATGAAACTGTTTCGAGAGAAATGGAAATCATGGTCAAGGAGAAAGGTATCAA CTCCTTTAAGTTTTTCATGGCATACAAAGGAGCTCTCATGATCAATGATGAGCTTCTTCTGGAAGCATTTAAAAAATGCA AGTCCCTTGGCGCCTTAGCCATGGTCCATGCAGAAAATGGAGATGCTGTGTATGAAGGTCAAAATAGAATGATTGAGCTT GGAATAACAGGTCCTGAGGGGCATGCTCTTTCAAGGCCTGCAGTGTTGGAAGGAGAGGCAACTGCCCGTGCTATTCGCTT AGCAGATTTTGTAAACACTCCTTTGTATGTGGTTCATGTAATGAGCATTGATGCAATGGAAGAAATTGCAAAGGCCCGCA AATCAGGACAACGGGTAATTGGAGAGCCTGTTGCCTCTGGGTTAGCCCTTGATGAATCTTGGCTTTGGCATCCTGACTTT GAGACTGCAGCAAGGTATGTCATGAGTCCCCCTATTAGAAAACGAGGACATGATAAGGCCCTTCAAGCAGCCCTATCAAC AGGAGTTTTGCAGCTGGTAGGAACTGATCATTGTGCCTTTAATTCCACCCAGAAAGCTTTTGGAATTGATGACTTCCGGA AAATTCCTAATGGTGTCAATGGCATTGAAGAAAGGATGCATATAGTATGGGATATCATGGTGGATTCTGGCCAGATATCT GTCACTGACTATGTCCGGGTGACCAGCACCGAATGTGCTAAAGTCTTCAATATATATCCAAAGAAAGGAGCTATTCTTCC AGGATCTGATGCAGACATTATCATCCTCAATCCAAATTCAAGCTTTGAGATAACTGTGAAGTCACACCACTCCAGGCTGG ACACAAACGTCTATGAGGGAAGAAGGGGAAAGGGCAAAGTTGAAGTGACTATAGCAGGAGGAAGAATTGTTTGGGAAAAC AATGAACTGAAGGTTGCTCCTGGTACTGGAAAATACATAAAAACGCCTCCTTTTAATTATCTATTTGATGGACTGGACAA GAAAGATGCCAGTTATCTGAATTCCCTTCAAGCCCCAGTAAAGCGAGCCAAATCCACCATTTAA
Protein sequence (LotjaGi1g1v0051700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQLNCSEAMVFNFSISPFFFQFCEAGIGHTESSCGTGTPSSSKLLIKGGTVVNAHHQHVADVYIEDGIIVAVNPTINVGD EIKVIDATGKFIMPGGIDPHTHLEFEFMNTVTVDDFFSGQAAALAGGTTMHIDFVIPLNGSLTAGFEAYEKKAKKACMDY GFHMAVTKWDETVSREMEIMVKEKGINSFKFFMAYKGALMINDELLLEAFKKCKSLGALAMVHAENGDAVYEGQNRMIEL GITGPEGHALSRPAVLEGEATARAIRLADFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPVASGLALDESWLWHPDF ETAARYVMSPPIRKRGHDKALQAALSTGVLQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHIVWDIMVDSGQIS VTDYVRVTSTECAKVFNIYPKKGAILPGSDADIIILNPNSSFEITVKSHHSRLDTNVYEGRRGKGKVEVTIAGGRIVWEN NELKVAPGTGKYIKTPPFNYLFDGLDKKDASYLNSLQAPVKRAKSTI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 40 | 513 | 474 | 1.5E-249 | – | |
| PANTHER | 40 | 513 | 474 | 1.5E-249 | – | |
| SUPERFAMILY | 43 | 494 | 452 | 1.33E-33 | ||
| Gene3D | 44 | 503 | 460 | 1.2E-189 | ||
| CDD | 44 | 490 | 447 | 0.0 | ||
| TIGRFAM | 44 | 494 | 451 | 8.7E-194 | ||
| Pfam | 91 | 477 | 387 | 2.4E-27 | ||
| Gene3D | 95 | 464 | 370 | 1.2E-189 | – | |
| SUPERFAMILY | 95 | 423 | 329 | 3.98E-96 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds. |
Expression pattern of LotjaGi1g1v0051700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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