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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0053300 |
| Transcript ID | LotjaGi1g1v0053300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquitin-associated domain-containing family protein; TAIR: AT2G26920.1 Ubiquitin-associated/translation elongation factor EF1B protein; Swiss-Prot: sp|P28515|ELT1_CAEEL Transcription factor elt-1; TrEMBL-Plants: tr|I1JIT7|I1JIT7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0053300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7519997..7524722) extracted from Lotus japonicus Gifu genome v1.2.
GGAAGGTGATTAAGTAATACAATTTGAACTGCATATTGTATTTTTTTTTGGTATAGGAAATAGGAATATGGCTGTCTTCC AATTTAACATGAAATCTATTTTACAAAAATAGAAACATTGTTTTCTATTTTCCCTTTTTTATTATTCATTTTTGGTTGTT ATTTCGCATTTTCAGATCTCTCTCTTTCTTCAAAACCCTAATTCTGCCAAATTCAGTTTCAGCCTCGAAAAACCTATCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCGACGATTTTCCCATTCAACGGTGATCCCTCCACCACCGCCACCGCCAC CGCCACCACCATCAACAACGCTTCTCTCTCTCTCTGAAACCCCAGGTTGGTTCATCTTCTTCTTCATTTTCCTCTGTTTC TCTGTTTTCTCTCATTTTTCGATCTCATTGGGCACGTTGTTGATTGATTCTGGCAGTTAGTATCCTTTTGCGTTTGGTTT TGGGTTTTGGGCAATCGCGGAATTCAGTGATTCGAATTCTGCATTTTGCTTTCAGGGGAATTGGGGAAATGGGCTCTGTT CATGGATCCTTGAATGCGAATTGCATTAGCCTTGTGGTGGTTCATGATGTTCTTTCTATCTTGATTCTTGATTGCGGTTT TTCATTCTTGAATTTGATGCGGATTTCTAGGTTTCATGTATTGAGCACTATTTACACCAGATAGGGGGGAAGTTTCGTTC TTTAGGTTTACAAATCGTATGGTTCATCCTTGGAACTTGAATTTCTTTTAGGAATGATGACTATTAAGTTTGAGAATTTG GGATTATGGTATCATGGTTCGTTCCGGGAACTTGAATTTCTGTTTTGGAATGATGACTGATAAGTGTGAGAAATTGGGAG AGAGTCATTGACATTGTGGAATGGAAGAATGTTAACTCTTATTTTCGAGTTAGACTATGAACTTAGTTATCTATGCCTGT CTATAGAAGACCGTTCTTGTATTAACTAAGGTCATTAACTTAGAAGAAGAAGAATGGTGGATGGTCGAAGGAATTGAAAT GGATTGACATATTGGCTTTGCTATATTCTTATAATGCTTTGTTTTCGTGTTTTTCCTTTTTATTTTAGCTTCTGTATATT TTAAATTTCAATATTGTTGTATGCTTCATTGAAACAAAAGTTAACTGCATTCTTGGATTTGATACTTGCATGTCAATTTC ATCTTCTCAATAACCGTTTCATAATTTATCAACTTGTATGATTCATCCTTCTACACGTCAAATTCGAGTGAATCCTTCTC AAGTTTGATGAGGTGTCGTGCCCTTCTGTTGCTGAAGAGGATCTACATTTTCTATTATCAGATGAAGCCCAAATACTTCA AAATGGAAAAAAGTATTAGTGTTGTGTCATGTCTGATACCCATATGCATGTGATTACCCCTGCATATTGAATTAGTAGTA GATTTGTCTCGTGTTGAACCAACGTTAGAAGTTATGCTTTTTTGGATGATTGGAATGGGGGAGGTGGAAATGATACAACT AGTATTAGATGGTAAATAGTTGGCAGTTGTATACTATATAGAGCTAGATTTTTAAATTGGACTGATGTTTTTAACTGACA TTCTAGTTTAGGTTGGTGAAAAAGTATGTAATTTTTATGCCATGTTTATGGGGAACTCTATATTTTGATCTGCATATGGG GAAGAAGTATCTATGCTTTTTGTTGTATCAAATGTAATTTTTTTTTTTTTTGAAAACTGTGATCACCACATACTAATATG GGTGTCTTAATCATATATATTTGTCTCTCTCCAAATTTGATATAATATATATTGGTGTTAACGTATCTAGACCATAGATT GTATCATATCTTGATTTTATTTTTAAAAGTTTCCTTGCATCCATATCATGTTGTACCTGTTCATATGAAGAATGTAGGCT TCACATGTACAATTGTATCCATATCATCGTTGGCTAGCTTACTTTCTTCTTGCTGTTGTTCATTTATTTTTCCTCTTAGT AGTTTATTATGCTTTGAGCTAGGGAATGGAAGTTAGTTTTTTTTCTCGTTGTCTTGATTATGGAGAAGTTAAGTTTCCTT TAAATTATAAGTGCTTGGTGTTTTGCCAATAGATCCATACATCTGTTATGAAAATGTAATGATCAGGCTTTTTATTTGGA TTACATGTGAACAGAATGATATTTGGCCAAAAGATTTTTCCTTTGACGTTGTTGACACATGTAATACTCTGCTTATTTTA CAGAAAAAATAGAAAACAATTAACTTCATTTTCTTTGAATGTTACAGGCCCATTGTCTACTTAGGAAATGTCTCCTGCAT CCCGCTCTAAGTCTAAAGACAAGAAGGCTTGTAAGGAAGCTCAGAAGGCTTCTGCAAAGCCTACAGGATCGGGTAATGCA GTAGCTGGTATTCCAACGAGTGGATACAACCCATTGTTAGGAACATTCCATACTCTGGACATGTCACCATCACCTGCTAC TTCACCAATACATTCTAATAGCCGTTTTCGGAACATAGATGAGACGGATGAACATCCTGGGAGCTCAGTGGTAGCTGGTC TTGAGTATGATTCTGTTTCTAATAATGGTAGTTGGTCTGGTGAGTCTGAAGACCATAAAGAGAAAACTTCTAATCCTGCT GTTCGGTTGGAATCATTACCTGGAGCTGATAATGACAAGCGAGAGAAGATCCGGCAGAAAAATGAAAGGAAACATCAACG GCAGAGGGAAAGGCGAGCACAAGAGTTGCATGAGAAGTGCTGTGGTTATCTTATGTCAAGGAAACTTGAGGCACTTGCTC AACAGCTTGTGGCTATGGGATTTTCTCATGAACGGGCAACAATGGCACTGATAATGAATGAAGGTAGGGTGGAAGAATCA GTAGCATGGCTGTTTGAAGGTAGTGAAGAAGCAGATAGTCACAAGGATAAAAACTTCAATGACAATCTGAAAATTGACAT ATCAGAAGAACTTGCTCGGGTCGCAGACATGGAAACCCGGTATGGGTGCTCGAAACAGGAGGTTGAAAGAGTGATTGTGA ACTATGAAGGCGATCTTGATAAGGCTGCAGAGACCTTGAGAGAAGCGAGACATGATCCACCATCTGCTCCACCAAAGCCT GAGGAAACTGGTGACCCTTTTATCATTAACAATGGTAAGCAGTCAGGAGTTGTGAGTCAGAGCCCAAGGCCACAAACAAA ACCTATTCCTTCTCCAAATCAACTCAGAAAAGACGAAAAAGATTTTAACTATACAAAAGCAGCAACTACGATTGGCGTAA CTTCAGAATCTAGTAATAAAAATATGCAGCCTCTAAAGAGAATACAGCCCAAGTCTGAATGGGTAAGGCCCCAACAAGCT ACTATACCAGCTGACAAAAGGTGGCCGCCTAGTGCAGGAGCTAATCCTTCTGTTTCTTATTCACTGGCATCGCCTTTGCA GGTGTCAGCCCCACCTGCTAAGAGTGAAGCTCTTTACATGTCTGTTGGAGGTGATTTTAAAAACCTACAACCGGGAGCAG CTAGGGACCCGATGGTTGTGATGCAGCGCCCCCAAACTGCAAATGCAAAGCAGGTACCAGCCACAAGCATGAGTTCATCA CCTCCTGGCAATGCTGCTAGTTGGTATCCAACCAACAGTGTAGAAGCTATGAGGTCTAATGGCTTTATATCTCATCCTCC TAGCACTATGAGCCCCAGTCCAAACTATCTCAGTTCTAATCAAATGTACCACCAACTTCAGTATCACCCTCAACAACCCT TTGTTGCTGGCAACAGTAATTCAGTGGATCCCCAAGTAACCAGCCGAGGGAATAACATTTGGAATAGAACTGGTGCATCT CCAACGCTTGCTGCCGCTGCTTCTCTGGGACTTTTTTCCGGGATAGGATCAGCTGCCACTTCAGGGGCATCTTCTCCGGT AGACTGGAGCACTGGTGGGTCGGTGCAGTTCGACTATACCAGCATAGACTGGTCCTTGGATAGAGGTTTAGCTTCGCCAA GGTCAAATCCTTTATGGTTAGGGCTTTCACCTTATTCAAAAACCAGTGCTCATACGTATGACTCAAGTGCTTCTGGTGCT GCTGCTCAACTGCCAATGAGATCAGTGCCCTCAAATGGGAGCATTGTGCCCATGCCTGGATCGCAAGATGGCGGAGTAGC TTCTGGCGATGCATCTGCTGCTGGTTCTCGGGATTGGAGTTCTCCGTTTGAAGGGAAAGATCTTTTTAGTTTACCGAGAC AGTTTGTTTCTTCTCCTTCTCTGTAGAATGAGAGGAGAGAAATTGAATGGAATAAAATGAAAGAAACCCAGAAATGTGTG TGGATCTGTTGTTGGTTCTTATGATTCTACAGTTCATGTTTGCTCACTGCCTTTGGCACTCACATGCACATTCACATTTA CATTCGCTACTCACCCACCTTCTAACCCATTGCGCTAATAACCCCTAATTTCTGAGTAATGCTGTAGCCACAAGAGTGAA GTCACAAACTCAAACAGTTAAGAGCCATTGGATAGCTGATAAGTCTGATTTAAAATCCAATGACTCTGCGCTGTTCTAAG TTTGTTTTTGTGACAAGTTTTGTTGCTGCAGCAGTTTTATGTTATAATGTTGATCTAACTGCATTAATGGACAAACGCTA TATCACTCGATTAGTATATAATTTAGGCAGATATGAAGGAGACTATCAATGAACAATACACACCGTTAAATGATATAAAG TGAAAT
CDS sequence (LotjaGi1g1v0053300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCCTGCATCCCGCTCTAAGTCTAAAGACAAGAAGGCTTGTAAGGAAGCTCAGAAGGCTTCTGCAAAGCCTACAGG ATCGGGTAATGCAGTAGCTGGTATTCCAACGAGTGGATACAACCCATTGTTAGGAACATTCCATACTCTGGACATGTCAC CATCACCTGCTACTTCACCAATACATTCTAATAGCCGTTTTCGGAACATAGATGAGACGGATGAACATCCTGGGAGCTCA GTGGTAGCTGGTCTTGAGTATGATTCTGTTTCTAATAATGGTAGTTGGTCTGGTGAGTCTGAAGACCATAAAGAGAAAAC TTCTAATCCTGCTGTTCGGTTGGAATCATTACCTGGAGCTGATAATGACAAGCGAGAGAAGATCCGGCAGAAAAATGAAA GGAAACATCAACGGCAGAGGGAAAGGCGAGCACAAGAGTTGCATGAGAAGTGCTGTGGTTATCTTATGTCAAGGAAACTT GAGGCACTTGCTCAACAGCTTGTGGCTATGGGATTTTCTCATGAACGGGCAACAATGGCACTGATAATGAATGAAGGTAG GGTGGAAGAATCAGTAGCATGGCTGTTTGAAGGTAGTGAAGAAGCAGATAGTCACAAGGATAAAAACTTCAATGACAATC TGAAAATTGACATATCAGAAGAACTTGCTCGGGTCGCAGACATGGAAACCCGGTATGGGTGCTCGAAACAGGAGGTTGAA AGAGTGATTGTGAACTATGAAGGCGATCTTGATAAGGCTGCAGAGACCTTGAGAGAAGCGAGACATGATCCACCATCTGC TCCACCAAAGCCTGAGGAAACTGGTGACCCTTTTATCATTAACAATGGTAAGCAGTCAGGAGTTGTGAGTCAGAGCCCAA GGCCACAAACAAAACCTATTCCTTCTCCAAATCAACTCAGAAAAGACGAAAAAGATTTTAACTATACAAAAGCAGCAACT ACGATTGGCGTAACTTCAGAATCTAGTAATAAAAATATGCAGCCTCTAAAGAGAATACAGCCCAAGTCTGAATGGGTAAG GCCCCAACAAGCTACTATACCAGCTGACAAAAGGTGGCCGCCTAGTGCAGGAGCTAATCCTTCTGTTTCTTATTCACTGG CATCGCCTTTGCAGGTGTCAGCCCCACCTGCTAAGAGTGAAGCTCTTTACATGTCTGTTGGAGGTGATTTTAAAAACCTA CAACCGGGAGCAGCTAGGGACCCGATGGTTGTGATGCAGCGCCCCCAAACTGCAAATGCAAAGCAGGTACCAGCCACAAG CATGAGTTCATCACCTCCTGGCAATGCTGCTAGTTGGTATCCAACCAACAGTGTAGAAGCTATGAGGTCTAATGGCTTTA TATCTCATCCTCCTAGCACTATGAGCCCCAGTCCAAACTATCTCAGTTCTAATCAAATGTACCACCAACTTCAGTATCAC CCTCAACAACCCTTTGTTGCTGGCAACAGTAATTCAGTGGATCCCCAAGTAACCAGCCGAGGGAATAACATTTGGAATAG AACTGGTGCATCTCCAACGCTTGCTGCCGCTGCTTCTCTGGGACTTTTTTCCGGGATAGGATCAGCTGCCACTTCAGGGG CATCTTCTCCGGTAGACTGGAGCACTGGTGGGTCGGTGCAGTTCGACTATACCAGCATAGACTGGTCCTTGGATAGAGGT TTAGCTTCGCCAAGGTCAAATCCTTTATGGTTAGGGCTTTCACCTTATTCAAAAACCAGTGCTCATACGTATGACTCAAG TGCTTCTGGTGCTGCTGCTCAACTGCCAATGAGATCAGTGCCCTCAAATGGGAGCATTGTGCCCATGCCTGGATCGCAAG ATGGCGGAGTAGCTTCTGGCGATGCATCTGCTGCTGGTTCTCGGGATTGGAGTTCTCCGTTTGAAGGGAAAGATCTTTTT AGTTTACCGAGACAGTTTGTTTCTTCTCCTTCTCTGTAG
Protein sequence (LotjaGi1g1v0053300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPASRSKSKDKKACKEAQKASAKPTGSGNAVAGIPTSGYNPLLGTFHTLDMSPSPATSPIHSNSRFRNIDETDEHPGSS VVAGLEYDSVSNNGSWSGESEDHKEKTSNPAVRLESLPGADNDKREKIRQKNERKHQRQRERRAQELHEKCCGYLMSRKL EALAQQLVAMGFSHERATMALIMNEGRVEESVAWLFEGSEEADSHKDKNFNDNLKIDISEELARVADMETRYGCSKQEVE RVIVNYEGDLDKAAETLREARHDPPSAPPKPEETGDPFIINNGKQSGVVSQSPRPQTKPIPSPNQLRKDEKDFNYTKAAT TIGVTSESSNKNMQPLKRIQPKSEWVRPQQATIPADKRWPPSAGANPSVSYSLASPLQVSAPPAKSEALYMSVGGDFKNL QPGAARDPMVVMQRPQTANAKQVPATSMSSSPPGNAASWYPTNSVEAMRSNGFISHPPSTMSPSPNYLSSNQMYHQLQYH PQQPFVAGNSNSVDPQVTSRGNNIWNRTGASPTLAAAASLGLFSGIGSAATSGASSPVDWSTGGSVQFDYTSIDWSLDRG LASPRSNPLWLGLSPYSKTSAHTYDSSASGAAAQLPMRSVPSNGSIVPMPGSQDGGVASGDASAAGSRDWSSPFEGKDLF SLPRQFVSSPSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 651 | 651 | 1.9E-282 | – | |
| MobiDBLite | 1 | 145 | 145 | - | – | |
| MobiDBLite | 51 | 66 | 16 | - | – | |
| Gene3D | 119 | 215 | 97 | 9.0E-11 | – | |
| ProSiteProfiles | 146 | 198 | 53 | 10.499 | ||
| SMART | 160 | 197 | 38 | 0.34 | ||
| SUPERFAMILY | 161 | 205 | 45 | 7.54E-10 | ||
| Coils | 211 | 231 | 21 | - | – | |
| SMART | 218 | 259 | 42 | 7.6 | ||
| Coils | 236 | 263 | 28 | - | – | |
| MobiDBLite | 259 | 311 | 53 | - | – | |
| MobiDBLite | 279 | 295 | 17 | - | – | |
| MobiDBLite | 599 | 637 | 39 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0053300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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