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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0060300 |
| Transcript ID | LotjaGi1g1v0060300.14 |
| Related isoforms 14 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR type disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1; TrEMBL-Plants: tr|G7KVZ7|G7KVZ7_MEDTR NBS-LRR type disease resistance protein; Found in the gene: LotjaGi1g1v0060300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:8446107..8452903) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTATGTTTTTGCAGGCTTGTAATTCTAATTCAACACCAATTTGGTTACTCTGCTATTTCTGATTCAATTTTTGGTTA ATACCCAATCGAGGTGTGTGATTGTTAATGTATATTTGAACTTTTTTGAATATTATACTGCTTCTGCATGCACTTCTACT GGTTCAAATGTGTGGAAAATTTACTAAATTATTACCTTTCTACTGGTTCTTCTTAGGAATTTATTTGTGTATCACTTTCT AAGGATGATTTAGTGGATTAGTGGTTAACTACCTTGTGTATATTGTGAAATTTAACTCAGGAGCAAAGAAGGGAAATAAG AATTGATTAGTCATGATGAAAAGGAGGTGGAAAAGGCCTGCAATAACAAAGAAAACCAGCAATGACAGCAAGCTAAAATT GCAGAATATGAAGAACATGATGAAAAGGAACTTTTTGTTAACAATTATAATGCTGCAGAGAGTGTGACATGGATTTCTCA TGTATAATCTTTCCTGAAACTGGAAAAGGTCATTTCCAAGGTGACCAACAGACAGAAAAATTGTAGTTGGCACTTCAAGT CTTCAACAGATGTGAAACTAATCATGGATGATTTTTCAGTTCCTGGAATTAGCCGAATGGTGTCCAACACCTCACTTCAC TCCAGCTTTTGAGAATTCAGGACTGCCCAACATTAGCTGAGAGGTGTAAGGAGGGAACAGAGGTGGATTCGGACAAGATA GCGCACGTTCCCAAAGTTGAATTCTGCAACGCGTAATTTTGCCTAATGGGGGAGAACTTGAACAACAATTTGGGTACTCT GCTATTTCTGATTCTATTTTTGGTTAATACATATCAGATGTCTTTGATCTTCCTTTTGGAGACTGGATTCCCTGACCAAC TCTCAATCGAGGTGTGTGATAAATATTACAATCCTCTATTATAATTATTTGTTTTTTATTGTTTACAATTTTTGACTTTG TGTGTGGGTTTGATGAATATGGTATGGCCTGTTACAATCTTTTTGCAGTATTTATGTGAACTTGAATTATTTTGATTGAT GATGTTTGTTGGACCTGCAAATTTTTGAGGTATTGTAGGTTAAGTAGTGTAGGAAACTTTGATGATTTGTGTGAGTGTGT TCTTTATTCATGCTTTATGTGTCGTGTCATGTTAATTCATGATGCTTAAAACATTTATCTGAAGAGCAAAATTACAATTT GAATTGCTTTGCTTGCTATATGGTAGTGTATGTTGTTTGTGAAGTTGGTAAGATTAGATTGAAAATTGATGATGTATATT GATCTGTCATAACTCATTGACTTGTTGATGTATATTTGAACTTTCTGAATATTCTACTGGTTCAAATGTGTGGCAAATTT TCTATATGAATACATTTTTGCACAAGTTTAGGAATTTATTTGTGTATCACTTACTAAGGATGATGTTAGTGATTAACTAG CTTGTGTATATTGTGACCATATCTCCTGCTTTGCTTCAGTGCTCAAAAGAACCCTTCAAATGGAGAGGCAGCCAACCCAG GGAGAGAAGCTTTCGGCCATAAAAGCAAACTGTCAAGTTGAGCTTTCTCTAGATGAATGTGTGATGATTCTCAGTCATAA GAGAGAATTCCACAGGCTCCCTTGAAGACCTTATAGATATTGCGATATGGAGGTTGCAACAATTATGGGAACATGCCAAG CTCATCATTTGTGTGGTCTCTCTGAGGATGAATGTTGGATGCTATTCAAACAATATGCATTTGGAACTGTAAAAGAAGAA CGTGCAGAGCTTGTAGCTATTGGCAAAGAGATAGTAAAGAAATGCGGAGGATCACCTCTTGCAGCACAAGCACTAGGAGG TCTCTTACACTCAAGGAATGAAGAAAAAGAATGGCTTGAAGTTATGAAAAGTGGGATTTGGAATTTAGCGGGTGAAAATT CTATTTTTGCTGTCTTGAGATTGAGCTACTTTCATTTAACGCCAACAATAAGACAGTGTTTTGCATTTTGTGCCATGTTT CCTAAAGATACAGAAATCATGAAGGAAGATTTAATTCATCTTTGGATGGCTAATGGGTTTATATCACCAAGGGAGAACTT GGAGGTGGAAGATGTTGGCAATATGATTTGGAATGAATTGTATCAAAAATCATTCTTTCAAGATATGAAGTTGGTTGATT ATTCAGATGTTATTCATTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAATAATGGGGCAAGAGTGCATGGTT TTGGGCAGTGCAAACATGACAGATTTGTCAAGAAGCACCCACCATGTTGGTTTTGGCTCTGATCGGGATGTATCCTTGCT GCACAAGCGCGCCTTGAAGAAAGTTGAATCCTTGAGAACACTTTATCAATTAAATGTGAACAGCGGAACTTCTGGTTGCT TCCCAATACACTGCATCACTCTACGGGTATTGCGCTCAAGTTCTTCCAACTTATCATCACTCAAGAGTTTGATTCATTTG AGGTATTTAGAACTTTCCGAGCTTGAGATAGAAACCTTGCCCGACTCAATTTATAGCTTGCGGAAATTGGAAATCTTGAA GTTGATTAATTTGAAAAAACTTGTTTGTCTACCTAAAGACTTGACTTGCTTACAAGAACTTAGACATCTTGTCATTGAAA GTTGTTGTTCATTGTCTTGTATGTTCCCTAACATTGGAAAATTATCCTATCTGAGAACGTTAAGTAAGTACATTGTCTCT TCAGAGATAGGGCATAGCCTGACAGAATTACATGACTTAAAACTGAGAGGAAATTTGCGCATTGAAGGTCTAGAAAATGT TGGCAGTTTATCAGAAGCTCAAGATGCCAACTTGATGGGTAAAAAAGACGTCCACAAATTAGAGTTGATATGCGACAAGC TGTTTCACACAAAGCCATATGCTACTAATCCGGAGCTAGTACTTAATGCGCTTCAACCTCACTCAAATCTCAAGAATTTG AGAATAGAATACTATGCTGGATTACAATTACCGACCTGGATGGAAATGCTCACCAATTTAGTTTCTCTAAAGCTTTATGG ATGCGAGATGTGTGTGCGGCTTCCCTCACTTGGTAAACTACCATATTTAAGAAGAATTGAAATAAGTGAAATGAAAGATG TGCAGTACATGGATGATGACGAATCTTATGATGGTGTGGAGGTGAAAGCTTTCCCGTCATTAGAAGAACTCTCACTATGG CGGTGCTTAAAGTTAGAGCGGTTGTTGAAAGTGGAAAGAGGAGAGAATTTCCCCTGTCTTTCTTGTTTGGAAATTCAGAA ATGCCCTAAACTTGAGTTACCATGCATTCCATCACTGAAAATGCTCGAGTTAAGTAATTATACGAATGAGTTACTGAGGT CACTCTCAGGTTTCAATGGCCTTACCTCCCTTTGGCTTTACGATGGCGATGTAGACCTGACATCCTTCCCGGTGGGAACA TTGACTTGTCTTCAGACTCTGTCGATATCTGGTTTCGAGGTATTGAAGGAATTACCAAATGAAATCTTCAAAAACCTCAA CAATTTGGAGCATCTGAGCATCTGGTGGAGCAGCGAGCTGGAGTCTTTACCAGAGCAAGGGTGGGAAGGTCTTCGCTCCC TTCGAACTCTGCAGATTGTGGGATGTGGTGAATTGAAATCCTTGCCGGATGGTGTTCGACACCTCACTTCACTCCAGGTT TTGAGTATTGGTAACTGCCCAGCATTAGCCGAGAGGTGTAAAGAGGGAACAGGGGAGGATTGGGACAAGATAGCGCACGT TCCCAAAGTACAAATTGATTTCGAAGAGGACTCAGACTCAGACTGATTCTGAATTCGGTAACGTCTCTTTTCCCGAACAA CTCCCGCTTTTTCTGTTATTACTTTTCTCGTTGGGTAGTAATGTAATGTAAGTAATACATATATGTTTTTATGTTTTTGC AGGCTTGTAATTCTAATTCAACACCAATTTGGTTACTCTGCTATTTCTGATTCAATTGCTTAATGCTTTTTGGGTAAGCT CTCTATTTCTGATTCAATTTTTGGTTAATACATATTATTGGTTTACAATTTTGGGCTTTGTGTGTGGGTTTGATGAATTT TGGTATGTCCTGTTGTAATCTTTTGGCTGAATTTATGTGAACTTCAATTATTTTGATTCATGATGTTTGTTGGAACTGCA AATTTTTTAGGTTTTGTAGGAAACTTTGATGATTTGAGTGGGTGTGCTCTTTATTCATGCTTTATGTTGTTTGTGTAGAA TAATTAGATTGAAATTTGATGATGTATATTGCTCTGTCACAACTCATTGATTTGTTGTATATTTGAACTTGAATTTTTAT CAATAATGTAGTTTTTCTGGTTTGGAGTTGGCTATAAATACAATGGGGGAGTTGTATGAGTTCACCAGCTTGGTTCTGCG TGCAATTCTACTGGTTCAAATGTGTACACAAGAAAGAACTTCAATGCCTAAAGAACATTGAAATATCAGCCAGAAGAAGA TGTGGCTGATGTTATGCCTGCAACCCTTGCTCAGGTATGTGCCTAAAGAACATTTTAATATCAGCTAAGTATTTGTTTTA ATTGAATACATAACTTCAACCAGATATAATTTTGAAGAAAGTGGTAGTGGTCAACACAAAAGCCTTTGCTTATAAAACTT GTTGAAATTCAATGTTCTTGGAAACACAGTGGAATGTGTGGCAAATTTTCTATATCATGAACTCTGCTGTTTGAGCGATG TACCGATTGAAATCCTTGCCGGATGGTGTTCAAAACCTCACTTCACTTGAGCTTTTAAGAGAGGTGTGGGGAGGGAACAG GGGAGGATTGTGAAAAGATAGCGCACATTCCCAAAGTAGAAGTTATTGTATATGAAAGATAGTGTTTATTCTTATCTTAG CTGCTCCCAATTCGGTAAGCTCTCTCTTCTACGTGTAATTTTGCCTAATTTGGTTGCTCTGTTATTTCTGATTCAATTTT TGGTTATTACTTATCAGACGTCTTTGATCTTCCCTTTGGTGACTGGATTCCCTGGCAAGCTAGCAAGAGCATCGTTGAAG ATAGTTGACCAGCTCCCAATAGAGGTGTGTGATAAATATTAAAATCCTCTATTATAATTATTTGTTTTTCATTGTTTTAA ATTTTGGACTTTGTGTGTGGATTTGGTGAATATGGTATAGCCTGTTACAAACTTTTTTCTGAATGGGTGTGGTCTTTATA AATGCTTTTAGTGTCATGAAATTTTAATAGATGATATGTAAGGCATTTATCTTAAGTACAAAACTACAATTTGAATTTGT TTGCTTTGCTTACTATATGATAGTGTTTGTTGATTTTGCTATATGATAGCGCACGTTCCCAAAGTTGAATTCTGCCATGC GTAATTTTGCCTAATGGGGGAGAAATTGAACACCAATTTGGGTACTCTGCTATTTTTTATTCTATTTTTGGTTAATACAT ATCAGACGTTGTTGATCTTCCTTTTGGAGACTGGATTCCCTGACCAACTCCCAGTCGAGGTGTGTGATAAATATTACAAT CCTCTATTTTTAATTTTTTGTTTTTTATTGTTTACAATTTTTGACTGTGTGTGGGTTTGATGAATATGGTATGGCCTGTT ACAATCTTTTTTCTGTATTTATGTGAACTTGAATTATTTTGATTGATGATGTTTGTTGGACCTGCAAGTTTTTGAGGTTT TGTAGGTTAAGTAGTGTAGGAAACTTTGATGATTTGAGTGAGTGTGTTCTTTATTCATGCTTTATGTGTCGTGTAATGTA TATTGATCTGTCAGAACTCATTGATTTGTTGATGTATATTTGAACTTGAATTTGAACTTTCTGAATATTCTACTGGTTCT GCATGCATTTTACTGGTTCAAATCAGTGGCAAATTTTCTATATAAATACATTTTTGCAACAAGTTTAGGAATTTATTCCT GTATCACTTACTAAGGATGATGTTAGTGGTTAACTAGCTTGTTTATATTAATAAACACAGTGGAAGAACTATCTCCTGCA TCAGTACTCAAAAGAACCCTTCATATGGGGAGGCAGCCAACCAAGGGAGAGAAGCTTTATGCATAAAAGCAAACTGTGAA ATTGAGCTTGCTCTCAATGAATGTGTGACGATTCTCAATCATATGAGAAGACTAAAAAGATATAGTGAGAGAGCTGCTTC TTTCTACTTCTCATGGTTTTTCCAGTACTGTCAAATTCAGTGCTTCAAGAAGAATTCCTTCATGGAATTGCATTGTGGGA GAGAATTTCAAAGGTCAAATTCACTCTGTCTAGCATACTGGTAACTGAAGGTGATCATTTGCAGCTTGAAAGGATCCATA ATGGATTGTGTATAATGTTGTTAAGAGAGAAGGCTTAAGACCTTCAAATAGGAGTCATGATTTTGAACTTACAGCAATGA AGCTGCTGAGCGTGTCCAAATTGATCTCCAAAGAAAGAGATTGATGCTGCTAGCTCAACTTCTGAATATGAAAATGATGA GTCGACACCAGCTAGGTTCCTCTGACACAGATGATAGTTAGTTCAAAAGATAAATTCTTTTTCATGCTTTTTATTTAATA TTTTGGTTGTATTGCTTTCTCCATTGTAAATAGTAAGAAATCTGGTCTTGGAAGGTCTCTATTCATGATTTGACTGGCAT GATTCACCATTTGGTTCCTCACTAAATGTAATTAGTGGGTGTTTGGAAATACAATATATTTTTCACATTGGAAAAAGTTG CTCTTAATAGTTTTTGTGAAGGGAGAAGTTGTCTGGAATCAGAAATGTTTGTTTTTTTGGTAAATTGAATCAGAAAT
CDS sequence (LotjaGi1g1v0060300.14) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTTGCAACAATTATGGGAACATGCCAAGCTCATCATTTGTGTGGTCTCTCTGAGGATGAATGTTGGATGCTATT CAAACAATATGCATTTGGAACTGTAAAAGAAGAACGTGCAGAGCTTGTAGCTATTGGCAAAGAGATAGTAAAGAAATGCG GAGGATCACCTCTTGCAGCACAAGCACTAGGAGGTCTCTTACACTCAAGGAATGAAGAAAAAGAATGGCTTGAAGTTATG AAAAGTGGGATTTGGAATTTAGCGGGTGAAAATTCTATTTTTGCTGTCTTGAGATTGAGCTACTTTCATTTAACGCCAAC AATAAGACAGTGTTTTGCATTTTGTGCCATGTTTCCTAAAGATACAGAAATCATGAAGGAAGATTTAATTCATCTTTGGA TGGCTAATGGGTTTATATCACCAAGGGAGAACTTGGAGGTGGAAGATGTTGGCAATATGATTTGGAATGAATTGTATCAA AAATCATTCTTTCAAGATATGAAGTTGGTTGATTATTCAGATGTTATTCATTTCAAGATGCATGATCTTGTCCATGATCT TGCTCAATCAATAATGGGGCAAGAGTGCATGGTTTTGGGCAGTGCAAACATGACAGATTTGTCAAGAAGCACCCACCATG TTGGTTTTGGCTCTGATCGGGATGTATCCTTGCTGCACAAGCGCGCCTTGAAGAAAGTTGAATCCTTGAGAACACTTTAT CAATTAAATGTGAACAGCGGAACTTCTGGTTGCTTCCCAATACACTGCATCACTCTACGGGTATTGCGCTCAAGTTCTTC CAACTTATCATCACTCAAGAGTTTGATTCATTTGAGGTATTTAGAACTTTCCGAGCTTGAGATAGAAACCTTGCCCGACT CAATTTATAGCTTGCGGAAATTGGAAATCTTGAAGTTGATTAATTTGAAAAAACTTGTTTGTCTACCTAAAGACTTGACT TGCTTACAAGAACTTAGACATCTTGTCATTGAAAGTTGTTGTTCATTGTCTTGTATGTTCCCTAACATTGGAAAATTATC CTATCTGAGAACGTTAAGTAAGTACATTGTCTCTTCAGAGATAGGGCATAGCCTGACAGAATTACATGACTTAAAACTGA GAGGAAATTTGCGCATTGAAGGTCTAGAAAATGTTGGCAGTTTATCAGAAGCTCAAGATGCCAACTTGATGGGTAAAAAA GACGTCCACAAATTAGAGTTGATATGCGACAAGCTGTTTCACACAAAGCCATATGCTACTAATCCGGAGCTAGTACTTAA TGCGCTTCAACCTCACTCAAATCTCAAGAATTTGAGAATAGAATACTATGCTGGATTACAATTACCGACCTGGATGGAAA TGCTCACCAATTTAGTTTCTCTAAAGCTTTATGGATGCGAGATGTGTGTGCGGCTTCCCTCACTTGGTAAACTACCATAT TTAAGAAGAATTGAAATAAGTGAAATGAAAGATGTGCAGTACATGGATGATGACGAATCTTATGATGGTGTGGAGGTGAA AGCTTTCCCGTCATTAGAAGAACTCTCACTATGGCGGTGCTTAAAGTTAGAGCGGTTGTTGAAAGTGGAAAGAGGAGAGA ATTTCCCCTGTCTTTCTTGTTTGGAAATTCAGAAATGCCCTAAACTTGAGTTACCATGCATTCCATCACTGAAAATGCTC GAGTTAAGTAATTATACGAATGAGTTACTGAGGTCACTCTCAGGTTTCAATGGCCTTACCTCCCTTTGGCTTTACGATGG CGATGTAGACCTGACATCCTTCCCGGTGGGAACATTGACTTGTCTTCAGACTCTGTCGATATCTGGTTTCGAGGTATTGA AGGAATTACCAAATGAAATCTTCAAAAACCTCAACAATTTGGAGCATCTGAGCATCTGGTGGAGCAGCGAGCTGGAGTCT TTACCAGAGCAAGGGTGGGAAGGTCTTCGCTCCCTTCGAACTCTGCAGATTGTGGGATGTGGTGAATTGAAATCCTTGCC GGATGGTGTTCGACACCTCACTTCACTCCAGGTTTTGAGTATTGGTAACTGCCCAGCATTAGCCGAGAGGTGTAAAGAGG GAACAGGGGAGGATTGGGACAAGATAGCGCACGTTCCCAAAGTATCAATTGCTTAA
Protein sequence (LotjaGi1g1v0060300.14) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVATIMGTCQAHHLCGLSEDECWMLFKQYAFGTVKEERAELVAIGKEIVKKCGGSPLAAQALGGLLHSRNEEKEWLEVM KSGIWNLAGENSIFAVLRLSYFHLTPTIRQCFAFCAMFPKDTEIMKEDLIHLWMANGFISPRENLEVEDVGNMIWNELYQ KSFFQDMKLVDYSDVIHFKMHDLVHDLAQSIMGQECMVLGSANMTDLSRSTHHVGFGSDRDVSLLHKRALKKVESLRTLY QLNVNSGTSGCFPIHCITLRVLRSSSSNLSSLKSLIHLRYLELSELEIETLPDSIYSLRKLEILKLINLKKLVCLPKDLT CLQELRHLVIESCCSLSCMFPNIGKLSYLRTLSKYIVSSEIGHSLTELHDLKLRGNLRIEGLENVGSLSEAQDANLMGKK DVHKLELICDKLFHTKPYATNPELVLNALQPHSNLKNLRIEYYAGLQLPTWMEMLTNLVSLKLYGCEMCVRLPSLGKLPY LRRIEISEMKDVQYMDDDESYDGVEVKAFPSLEELSLWRCLKLERLLKVERGENFPCLSCLEIQKCPKLELPCIPSLKML ELSNYTNELLRSLSGFNGLTSLWLYDGDVDLTSFPVGTLTCLQTLSISGFEVLKELPNEIFKNLNNLEHLSIWWSSELES LPEQGWEGLRSLRTLQIVGCGELKSLPDGVRHLTSLQVLSIGNCPALAERCKEGTGEDWDKIAHVPKVSIA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 2 | 81 | 80 | 3.9E-15 | ||
| SUPERFAMILY | 2 | 115 | 114 | 1.24E-22 | ||
| PANTHER | 9 | 507 | 499 | 1.7E-115 | – | |
| PANTHER | 9 | 507 | 499 | 1.7E-115 | – | |
| SUPERFAMILY | 179 | 549 | 371 | 2.72E-27 | – | |
| Gene3D | 218 | 354 | 137 | 1.1E-12 | ||
| Gene3D | 355 | 552 | 198 | 7.1E-22 | ||
| SUPERFAMILY | 502 | 687 | 186 | 2.52E-19 | – | |
| Gene3D | 553 | 695 | 143 | 4.3E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi1g1v0060300.14, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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