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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0060300 |
| Transcript ID | LotjaGi1g1v0060300.15 |
| Related isoforms 14 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR type disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0060300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:8478309..8483901) extracted from Lotus japonicus Gifu genome v1.2.
ATCCAATGACACTCGTAGCTTCATTGAAGTTTCCTTGATAAAGACAGCATTTAACTAGCTCTTTGCAGACTTTTGCTACC ACTATCCACACTTTGCTTCAGATCTCATCCAAGCAAAACCAGTCCCCGATATTGTTTCCTTTCCAACTTTTGCATTTCTG AAAATGGCTGAGGCTTTACTTGGAGCTGTATTTGAGAAATTGATCTCTCTAGCTCAGAATGAATTTGCAACCATCTCTGG AATCAAGGGAAAGGCTGAGAAGCTATCACACACTCTTGAACTGATCAAGGCTGTTGTTGAAGATGCTGAGAAGAAAGAGA TAACAAACAAATCTATAAAGGTTTGGCTGCAGCAGCTCAAAGATGCTGTCTACATCCTAGATGATATCCTTGATGAATGT TCCATAGAATCACTTCGACTTAAGGGATTGTCCTCTTTAAAACCAAAGAACATCAAGTTTCGCTATGAGATTGGCAACAG GCTGAAAGAGATTGCAAGGAGATTTGATGAGATTGCTGACTGTAAGAACAAGTTTGCTCTGCAAGAGGGTGTTAGGGAAA GGTCAACTGAAGTTGCTGAATGGCGCCAAACCAGCTCGTTCATTCCCCAACCTAAACTATATGGAAGAGAAGATGATAAG AAGAAGATTGTGCAGTTTCTTCTCAGCCAAGCACGCGAGTCTGATTTCCTTTCCATCTATCCCATTGTCGGCTTAGGTGG CATGGGAAAAACAACACTTGCTCAAATGGTCTACAATGATGATCAGGTAACAAGCAATTTTGACATCAAAGTTTGGATTT GTGTTTCTGAGAATTTCTCTGTCCAAAGGATTTTGTGCTCCATCATAGAATCTATTACAAAAGCAAAACATGATTGCTTG AATTTAGATGTAACAGAAAGAAAGGTGCAAGAGCTGTTGCAAGGTAAAAGATATTTTCTGGTTTTGGATGACGTGTGGAG AAAAGATGAAGAAATAAAATTTGGTTTAAACCAAGACAAATGGAATAAGCTGAAATGTTTGTTGTCATGTGCATCCAAAG GAGCTTCCATTTTAGTATCCACTCGCGATATGGAGGTTGCAACAATTATGGGAACATGCCAAGCTCATCATTTGTGTGGT CTCTCTGAGGATGAATGTTGGATGCTATTCAAACAATATGCATTTGGAACTGTAAAAGAAGAACGTGCAGAGCTTGTAGT TATTGGCAAAGAGATAGTAAAGAAATGCGGAGGATCACCTCTTGCAGCACAAGCACTAGGAGGTCTCTTACACTCAAGGA ATGAAGAAAAAGAATGGCTTGAAGTTATGAAAAGTGGGATTTGGAATTTAGCGGGTGAAAATTCTATTTTTGCTGTCTTG AGATTGAGCTACTTTCATTTAACGCCAACAATAAGACAGTGTTTTGCATTTTGTGCCATGTTTCCTAAAGATACAGAAAT CATGAAGGAAGATTTAATTCATCTTTGGATGGCTAATGGGTTTATATCACCAAGGGAGAACTTGGAGGTGGAAGATGTTG GAAATATGATTTGGAATGAATTGTATCAAAAATCATTCTTTCAAGATATGAGGTTGGATGATTATTCAGGTGACATTCAT TTCAAGATGCATGATCTTGTCCATGATCTTGCTCAGTCAATAATGGGGCAGGAGTGCATTGTTTTGGGCAGTGCAAACAT GACTGATATGTCAAGAAGCACCCACCATGTTGGTTTTGGCTCTGGTTGGGATCTATCCTCGCTGCACAAGCGCGCCTTCA AGAAAGTTGAATCCATGCGAACATTTTATCAGTTAAATGTCTACGACCGTGTTTCTGGTTGCATCCCAACCCACCGCAGT CTTCGGGTACTACGCACAAGTTCTTCCAACTTATCATCACTCAAGAGTTTAATTCATTTGAGGTATTTGGAACTTTTCCG CCTTGAGATGGAAACCTTGCCCGACTCAATTTATAGCTTGCAGAAATTGGAAATCTTGAAATTGAGATCTTTGAAAAAAC TTGTTTGTCTACCTAAAGACTTGACTTGCTTACAGGATCTTAGACATCTTGTCATTGAAGATTGTTATTCATTGTCTTGT ATGTTCCCTAACATTGGGAAATTATCCCGTCTGAGAACGTTAAGTAAGTACATTGTCAGTTCAGAGATTGGGCATAGCCT GGCAGAATTACATGACTTAAAACTCAGAGGAGATTTGCGCATTGAAGGACTAGAAAATGTTGGCAGTTTATCCGAAGCTC AAGAGGCCAACTTGATGGGTAAAAAAGACATCCACAAATTAGAGTTGATATGCGACAAGCTGTTTCACACAAAGCCATAT GCTACTAATCCGGAGCTAGTACTTAATGCTCTTCAACCTCACTCAAATCTCAAGAATTTGAAAATAGAATACTATGCAGG ATTAAAATTCCCAACCTGGATGGAAATGCTCACCAATTTAGTTTATCTTGTGCTTTATGGATGCAAGATGTGTGTGCGGC TTCCCTCACTTGGTAAACTGCCATATTTAAGAAGAATTGAAATAAGTGAAATGAATGATGTGCAGTATATGGATGATGAC GAATCTGATGATGGTGTGGAGGTGAAAGCTTTCCCGTCATTAGAAGAACTCTCACTATCAGGATGCTCAAAGTTAGAGCG GTTGTTGAAAGTGGAAAGAGGAGAGAATTTCCCCTGTCTTTCTAGTTTGAGAATTAATAAATGCCCTAAACTTGAGTTGC CAAGCTGCTGCATTCCGTCACTCAAAAGCCTCGTTCTATTTGATTATACGAATGAGTTACTGAGGTCCCTCTCAGGTTTC AATGGCCTTACCTCCCTTTGGCTTTACGCTGGCGATGTAGACCTGACATCCTTCCCGGTGGGAACATTGTCTTCTCTTCG GACTCTGCAGATATATAGTTCCGAGGTATTGAAGGAATTACCAAATGAACTCTTCAAGAACCTCAACAATTTGGACCATC TGCAAATCGTTTATTGTAGGAAGCTGGAGTCTTTACCAGAGCAAGGGTGGGAAGGTCTCCGCTCCCTTCGAACTCTGCAG ATTTGGGATTGTGGTGAATTGAAATCCTTGCCGGATGGTGTTCGACACCTCACTTCACTAGAGGTTTTGAAAATTTACGA CTGCCCAGCATTAGCCGAGAGGTGTAAAGAGGGAACAGGGGAGGATTGGGACAAGATAGCGCACGTTCCCAAAGTAGAAA GTACTGCCCAGCATTAGCCGAGAAGTACAAATTCTTATCTAATACGATGAAGACTCAGACTGATTCTGAATTCGGTGAGC TCTCTTTTCCCGAACAACTCCCGCTTTTTCTGTTTTTACTTTTCTCGTTGGGTAGTAATGTAATGTAAGTAATACATATA TGTTTTTATGTTTTTGCAGGCTTGTAATTCTAATTCAACACCAATTTGGTTACTCTGCTATTTCTGATTCAATTTTTGGT TAATACCCAATCGAGGTGTGTGATTGTTAATGTATATTTGAACTTTTTTGAATATTATACTGGTTCTGCTTCTGCATGCA CTTCTACTGGTTCAAATGTGTGGAAAATTTACTAAATTATTACCTTTCTACTGGTTCTTCTTAGGAATTTATTTGTGTAT CACTTTCTAAGGATGATTTAGTGGATTAGTGGTTAACTACCTTGTGTATATTGTGAAATTTAACTCAGGAGCAAAGAAGG GAAATAAGGATTGATTAGTCATGATGAAAAGGAGGTGGAAAAGGCCTGCAATAACAAAGAAAACCAGCAATGACAGCAAG CTAAAGTTGCAGAATATGAAGAACATGATGAAAAGGAACTTTTTGTTAACAATTATAATGCTGCAGAGAGTGTGACATGG ATTTCTCATGTATAATCTTTCCTGAAACTGGAAAAGGTCATTTCCAAGGTGACCAACAGACAGAAAAATTGTAGTTGGCA CTTCAAGTCTTCAACAGATGTGAAAGTAATCATGGATGATTTTTCAGTTCCTGGAATTAGCCGAATGGTGTCCAACACCT CACTTCACTCCAGCTTTTGAGAATTCAGGACTGCCCAACATTAGCTGAGAGGTGTAAGGAGGGAACAGAGGTGGATTCGG ACAAGATAGCGCACGTTCCCAAAGTTGAATTCTGCAACGCGTAATTTTGCCTAATGGGGGAGAACTTGAACAACAATTTG GGTACTCTGCTATTTCTGATTCTATTTTTGGTTAATACATATCAGATGTCTTTGATCTTCCTTTTGGAGACTGGATTCCC TGACCAACTCTCAATCGAGGTGTGTGATAAATATTACAATCCTCTATTATAATTATTTGTTTTTTATTGTTTTCAATTTT TGACTTTGTGTGTGGGTTTGATGAATATGGTATGGCCTGTTACAATCTTTTTGCAGTATTTATGTGAACTTGAATTATTT TGATTGATGATGTTTGTTGGACCTGCAAATTTTTGAGGTATTGTAGGTTAAGTAGTGTAGGAAACTTTGATGATTTGTGT GAGTGTGTTCTTTATTCATGCTTTATGTGTCGTGTCATGTTAATTCATGATGCTTAAAACATTTATCTGAAGAGCAAAAT TACAATTTGAATTGCTTTGCTTGCTATATGGTAGTGTATGTTGTTTGTGAAGTTGGTAAGATTAGATTGAAAATTGATAA TGTATATTGATCTGTCATAACTCATTGATTTGTTGATGCATATTTGAACTTGAATTTAAACTTTCTGAATGTTGCCGCAC ATTTTGGTTTAGTTTCATCAATAATGTAGTTTTGCTGGTTTGGGGGAGTTGTGTGAGTTCACTAGCTTGGTTGTGCAGGC AATTCTACTGGTTCAAATGTGTGGCAAATTTATTATTTTAATACATTTTGTGTATATTGTAACCTTTATCTACTGCTTCA GTACTCAAAAGAACCCTTCATATGGGGAGCTTCAAAAGGCAGAGCCAACCAAAGGGAGCAAGATGATGCACCTAGGAGAA GCTTTCAGCCATAAAAGTAATCTGTCAAATTGAGCTTGCTCTCGATGAATGAAATGCTGAGAGGGTTGATCCTTTCTACT TCTCATGGTTTGTCCACTATTGTCAAATTCAGTGCTTCAAGAAGAATTCCTTCATGGAATTTCATTGTAAGAGAGAATTC CACAGGCTTGCTTGAAGACCTTGTAGATATTGCTCCTGAATATGAAGATGATGAGTTCCTCACTGAACCACCAGATTCTA ATTCGATGGAGGCAGGCATGGACCACAATTCAGGCACAGAAGATAGTTATTTCAAAAGATAAATTATTTTCCATGTTCTT TTTAATATTTTGGTTGTATTGCTTTCTCCATTGTAAATAGTAAGAAATCTGGTCTTGGAGGGTCTCTATTCTTGATTTGA CTGGCATGACTCACCATTTGGTTCCTCACTAAATTAAATTATTGGATGATTGGAAATACAATATATTTTTCACATTGGGG TGAGAAGTGATCACGGAAAAACCTTGATTCTATATAGAATTTGTTTCTAATGCCAGGAGGCAAATTAAAGATATATTAAT CATTTAGTGAGATACTTTGTTTCTCACTAAATTAAAGATATATTAATCATTTAGTTAGTACTTTGTTTCTCAC
CDS sequence (LotjaGi1g1v0060300.15) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGGCTTTACTTGGAGCTGTATTTGAGAAATTGATCTCTCTAGCTCAGAATGAATTTGCAACCATCTCTGGAAT CAAGGGAAAGGCTGAGAAGCTATCACACACTCTTGAACTGATCAAGGCTGTTGTTGAAGATGCTGAGAAGAAAGAGATAA CAAACAAATCTATAAAGGTTTGGCTGCAGCAGCTCAAAGATGCTGTCTACATCCTAGATGATATCCTTGATGAATGTTCC ATAGAATCACTTCGACTTAAGGGATTGTCCTCTTTAAAACCAAAGAACATCAAGTTTCGCTATGAGATTGGCAACAGGCT GAAAGAGATTGCAAGGAGATTTGATGAGATTGCTGACTGTAAGAACAAGTTTGCTCTGCAAGAGGGTGTTAGGGAAAGGT CAACTGAAGTTGCTGAATGGCGCCAAACCAGCTCGTTCATTCCCCAACCTAAACTATATGGAAGAGAAGATGATAAGAAG AAGATTGTGCAGTTTCTTCTCAGCCAAGCACGCGAGTCTGATTTCCTTTCCATCTATCCCATTGTCGGCTTAGGTGGCAT GGGAAAAACAACACTTGCTCAAATGGTCTACAATGATGATCAGGTAACAAGCAATTTTGACATCAAAGTTTGGATTTGTG TTTCTGAGAATTTCTCTGTCCAAAGGATTTTGTGCTCCATCATAGAATCTATTACAAAAGCAAAACATGATTGCTTGAAT TTAGATGTAACAGAAAGAAAGGTGCAAGAGCTGTTGCAAGGTAAAAGATATTTTCTGGTTTTGGATGACGTGTGGAGAAA AGATGAAGAAATAAAATTTGGTTTAAACCAAGACAAATGGAATAAGCTGAAATGTTTGTTGTCATGTGCATCCAAAGGAG CTTCCATTTTAGTATCCACTCGCGATATGGAGGTTGCAACAATTATGGGAACATGCCAAGCTCATCATTTGTGTGGTCTC TCTGAGGATGAATGTTGGATGCTATTCAAACAATATGCATTTGGAACTGTAAAAGAAGAACGTGCAGAGCTTGTAGTTAT TGGCAAAGAGATAGTAAAGAAATGCGGAGGATCACCTCTTGCAGCACAAGCACTAGGAGGTCTCTTACACTCAAGGAATG AAGAAAAAGAATGGCTTGAAGTTATGAAAAGTGGGATTTGGAATTTAGCGGGTGAAAATTCTATTTTTGCTGTCTTGAGA TTGAGCTACTTTCATTTAACGCCAACAATAAGACAGTGTTTTGCATTTTGTGCCATGTTTCCTAAAGATACAGAAATCAT GAAGGAAGATTTAATTCATCTTTGGATGGCTAATGGGTTTATATCACCAAGGGAGAACTTGGAGGTGGAAGATGTTGGAA ATATGATTTGGAATGAATTGTATCAAAAATCATTCTTTCAAGATATGAGGTTGGATGATTATTCAGGTGACATTCATTTC AAGATGCATGATCTTGTCCATGATCTTGCTCAGTCAATAATGGGGCAGGAGTGCATTGTTTTGGGCAGTGCAAACATGAC TGATATGTCAAGAAGCACCCACCATGTTGGTTTTGGCTCTGGTTGGGATCTATCCTCGCTGCACAAGCGCGCCTTCAAGA AAGTTGAATCCATGCGAACATTTTATCAGTTAAATGTCTACGACCGTGTTTCTGGTTGCATCCCAACCCACCGCAGTCTT CGGGTACTACGCACAAGTTCTTCCAACTTATCATCACTCAAGAGTTTAATTCATTTGAGGTATTTGGAACTTTTCCGCCT TGAGATGGAAACCTTGCCCGACTCAATTTATAGCTTGCAGAAATTGGAAATCTTGAAATTGAGATCTTTGAAAAAACTTG TTTGTCTACCTAAAGACTTGACTTGCTTACAGGATCTTAGACATCTTGTCATTGAAGATTGTTATTCATTGTCTTGTATG TTCCCTAACATTGGGAAATTATCCCGTCTGAGAACGTTAAGTAAGTACATTGTCAGTTCAGAGATTGGGCATAGCCTGGC AGAATTACATGACTTAAAACTCAGAGGAGATTTGCGCATTGAAGGACTAGAAAATGTTGGCAGTTTATCCGAAGCTCAAG AGGCCAACTTGATGGGTAAAAAAGACATCCACAAATTAGAGTTGATATGCGACAAGCTGTTTCACACAAAGCCATATGCT ACTAATCCGGAGCTAGTACTTAATGCTCTTCAACCTCACTCAAATCTCAAGAATTTGAAAATAGAATACTATGCAGGATT AAAATTCCCAACCTGGATGGAAATGCTCACCAATTTAGTTTATCTTGTGCTTTATGGATGCAAGATGTGTGTGCGGCTTC CCTCACTTGGTAAACTGCCATATTTAAGAAGAATTGAAATAAGTGAAATGAATGATGTGCAGTATATGGATGATGACGAA TCTGATGATGGTGTGGAGGTGAAAGCTTTCCCGTCATTAGAAGAACTCTCACTATCAGGATGCTCAAAGTTAGAGCGGTT GTTGAAAGTGGAAAGAGGAGAGAATTTCCCCTGTCTTTCTAGTTTGAGAATTAATAAATGCCCTAAACTTGAGTTGCCAA GCTGCTGCATTCCGTCACTCAAAAGCCTCGTTCTATTTGATTATACGAATGAGTTACTGAGGTCCCTCTCAGGTTTCAAT GGCCTTACCTCCCTTTGGCTTTACGCTGGCGATGTAGACCTGACATCCTTCCCGGTGGGAACATTGTCTTCTCTTCGGAC TCTGCAGATATATAGTTCCGAGGTATTGAAGGAATTACCAAATGAACTCTTCAAGAACCTCAACAATTTGGACCATCTGC AAATCGTTTATTGTAGGAAGCTGGAGTCTTTACCAGAGCAAGGGTGGGAAGGTCTCCGCTCCCTTCGAACTCTGCAGATT TGGGATTGTGGTGAATTGAAATCCTTGCCGGATGGTGTTCGACACCTCACTTCACTAGAGGTTTTGAAAATTTACGACTG CCCAGCATTAGCCGAGAGGTGTAAAGAGGGAACAGGGGAGGATTGGGACAAGATAGCGCACGTTCCCAAAGTAGAAAGTA CTGCCCAGCATTAG
Protein sequence (LotjaGi1g1v0060300.15) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEALLGAVFEKLISLAQNEFATISGIKGKAEKLSHTLELIKAVVEDAEKKEITNKSIKVWLQQLKDAVYILDDILDECS IESLRLKGLSSLKPKNIKFRYEIGNRLKEIARRFDEIADCKNKFALQEGVRERSTEVAEWRQTSSFIPQPKLYGREDDKK KIVQFLLSQARESDFLSIYPIVGLGGMGKTTLAQMVYNDDQVTSNFDIKVWICVSENFSVQRILCSIIESITKAKHDCLN LDVTERKVQELLQGKRYFLVLDDVWRKDEEIKFGLNQDKWNKLKCLLSCASKGASILVSTRDMEVATIMGTCQAHHLCGL SEDECWMLFKQYAFGTVKEERAELVVIGKEIVKKCGGSPLAAQALGGLLHSRNEEKEWLEVMKSGIWNLAGENSIFAVLR LSYFHLTPTIRQCFAFCAMFPKDTEIMKEDLIHLWMANGFISPRENLEVEDVGNMIWNELYQKSFFQDMRLDDYSGDIHF KMHDLVHDLAQSIMGQECIVLGSANMTDMSRSTHHVGFGSGWDLSSLHKRAFKKVESMRTFYQLNVYDRVSGCIPTHRSL RVLRTSSSNLSSLKSLIHLRYLELFRLEMETLPDSIYSLQKLEILKLRSLKKLVCLPKDLTCLQDLRHLVIEDCYSLSCM FPNIGKLSRLRTLSKYIVSSEIGHSLAELHDLKLRGDLRIEGLENVGSLSEAQEANLMGKKDIHKLELICDKLFHTKPYA TNPELVLNALQPHSNLKNLKIEYYAGLKFPTWMEMLTNLVYLVLYGCKMCVRLPSLGKLPYLRRIEISEMNDVQYMDDDE SDDGVEVKAFPSLEELSLSGCSKLERLLKVERGENFPCLSSLRINKCPKLELPSCCIPSLKSLVLFDYTNELLRSLSGFN GLTSLWLYAGDVDLTSFPVGTLSSLRTLQIYSSEVLKELPNELFKNLNNLDHLQIVYCRKLESLPEQGWEGLRSLRTLQI WDCGELKSLPDGVRHLTSLEVLKIYDCPALAERCKEGTGEDWDKIAHVPKVESTAQH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 119 | 118 | 2.29655E-16 | ||
| Pfam | 6 | 101 | 96 | 1.5E-24 | ||
| PANTHER | 23 | 797 | 775 | 1.9E-173 | – | |
| PANTHER | 23 | 797 | 775 | 1.9E-173 | – | |
| Coils | 31 | 51 | 21 | - | – | |
| Gene3D | 135 | 314 | 180 | 4.1E-36 | – | |
| SUPERFAMILY | 138 | 417 | 280 | 1.78E-65 | ||
| Pfam | 155 | 383 | 229 | 8.5E-51 | ||
| PRINTS | 178 | 193 | 16 | 1.3E-17 | – | |
| PRINTS | 251 | 265 | 15 | 1.3E-17 | – | |
| PRINTS | 355 | 369 | 15 | 1.3E-17 | – | |
| SUPERFAMILY | 481 | 886 | 406 | 4.59E-30 | – | |
| Gene3D | 520 | 656 | 137 | 3.5E-14 | ||
| Gene3D | 657 | 868 | 212 | 3.0E-23 | ||
| PRINTS | 808 | 824 | 17 | 1.3E-17 | – | |
| SUPERFAMILY | 858 | 987 | 130 | 1.51E-15 | – | |
| Gene3D | 873 | 994 | 122 | 7.6E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi1g1v0060300.15, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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