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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0062600 |
| Transcript ID | LotjaGi1g1v0062600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT3G21630.1 chitin elicitor receptor kinase 1; Swiss-Prot: sp|Q6UD73|LYK3_MEDTR LysM domain receptor-like kinase 3; TrEMBL-Plants: tr|Q70KR8|Q70KR8_LOTJA Nod-facor receptor 1a; Found in the gene: LotjaGi1g1v0062600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:8690816..8697745) extracted from Lotus japonicus Gifu genome v1.2.
GTGTAACCAAACTTACTATCAGTAAGTGAACTAATGATTCCCAAGTCAACTTTTGTTCTAGCTAGCCAACCGTTACTATG TTCCCTCCACAATACATTCTCCTTGAAACTGTCAAGTGTCAACTGCACCCAAACATCCTTGTTTGTGATGAAAAGATCGA AAACGTGTGCTTATGAATTTACATGTTTACATTCACCAAAAATCAAAAGTTACACCTCTATACTTATCACATATGTTTGA GTCACTTTCCATATAAAATCCCATAGTCTATTAATTATCAGAGTAAGTGTGACATTAGTTTCAAGAGAAAAATAAATGAT CAAAACCTGGTAGAGAGTCCTAGAAATTCAATGTTCTGATTTCTTTCATTCATCTCTGCTGCCATTTTGATTTGCACAAT GAAGCTAAAAACTGGTCTACTTTTGTTTTTCATTCTTTTGCTGGGGCATGTTTGTTTCCATGTGGAATCAAACTGTCTGA AGGGGTGTGATCTAGCTTTAGCTTCCTATTATATCTTGCCTGGTGTTTTCATCTTACAAAACATAACAACCTTTATGCAA TCAGAGATTGTCTCAAGTAATGATGCCATAACCAGCTACAACAAAGACAAAATTCTCAATGATATCAACATCCAATCCTT TCAAAGACTCAACATTCCATTTCCATGTGACTGTATTGGTGGTGAGTTTCTAGGGCATGTATTTGAGTACTCAGCTTCAA AAGGAGACACTTATGAAACTATTGCCAACCTCTACTATGCAAATTTGACAACAGTTGATCTTTTGAAAAGGTTCAACAGC TATGATCCAAAAAACATACCTGTTAATGCCAAGGTTAATGTCACTGTTAATTGTTCTTGTGGGAACAGCCAGGTTTCAAA AGATTATGGCTTGTTTATTACCTATCCCATTAGGCCTGGGGATACACTGCAGGATATTGCAAACCAGAGTAGTCTTGATG CAGGGTTGATACAGAGTTTCAACCCAAGTGTCAATTTCAGCAAAGATAGTGGGATAGCTTTCATTCCTGGAAGATGTATG TTATCCTTTTTGTTTTAAATTTTTCCGCTTTGATTAAAGTTTATTATTATTAGCATGATTGGATCAACTTCTCTTTCATC AAAATCATTTCTGAAACTCAGAAGCTACTCACACAAGCTTCCTGGTTTCAGAATCAATTGTAGTAGGGTTTCCAAACATG CTCTTTTATCAAAATCAATTACGTAACTCAGAAACTACTCACATAAGCTTCTCCTTAGAATTGATTCTGTTTTTAGAATC AATTGTAAAAGGGTTTACAAACATGCACTCTGCTAGTGTGTGTGCTTAAAACTATTCATGGTGAAATTACTCTTCCATTG TTTCTACAATAATACATGACAAGGCATGTAACTTACCCCACCTAATTGAAAAATGGTTGGTGGTTATTGTTATATCATTT GTTCAATACATTTGATATAAACTTTTATGAATTTACCTGAAGTTTTACTTTTCTTTGAACTTTTCAGATAAAAATGGAGT CTATGTTCCCTTGTACCACAGGTGGGTAACTTCAATTGCCTACTCATCTTTTTATGATGAATGATAGCATGTTTGGATCA ACTTCTCTTTCACCAGAATTAATCCTTAAATTCAGAACTAAGAAGCTACTCACATAAGCTTTTTCCCGGAATTAATTCTG GCTTCAGAAGCAATTACACTGAAAGATTTCCAAACATGCTCTAAATATTGTTTCGTGCTTGGTTCTATCTTTTTAACTTT CATTTATTTTTCCTTTTTCATTTTGCAGAACCGCAGGTTTGGCCCTCTAAATTGGTTCTAGGGATGATTATTTTTACCTT GATGTTCACAAAAATATGAGAACACAAAAAAAGAGGATGCCTCTGAGCTTAGCTTTACTTCTATGTAAGCAGGTCTAGCT AGTGGTGCAGCTGTTGGTATATCTATTGCAGGAACCTTCGTGCTTCTGTTACTAGCATTTTGTATGTATGTTAGATACCA GAAGAAGGAAGAAGAGAAAGCTAAATTGCCAACAGATATTTCTATGGCCCTTTCAACACAAGATGGTAATGGTATATTTC CAAATTCATATTCCTTCTAAGTTCTAACCCTCTTTAGTCCCCCTGGAAATGGGTGAATGTTGGTGCTCTAATTTTTCATG TGTTTAAATCAGTTTTATACTAAGAGTCTGTTGGACAACAGGTTTTTGTTTTTAAAACAGAAAAAGCCGAAAATTTGTTT GATATGAAAAGTTTTAAGGAAATTCTTATTTTTTTGATATATCGGAAAATTCTTATTAAGTGTTCCTGTTCTCATTTTCT AAAACTAAAATTTCAAAACATCTCGGAGGATTTTTCTTCTTGTTTTTAGTTTTCAATTCACAGGTCTTTCAGTTTTGTAA GCATCTTGTTCAAATATAGATTTTCTTTTCTTCTTTTGAAAAACATGTCATAAAATTATTTCTGAAAATAGTTTTTAAAT TTAGAGGACTGAGAAGAGAATCAAACAAGTCCTAATTTTTACCTTTTCCTGTTTATCATTTATAAACTTATTACCTGATC TAATTTCAGGCTACATTTTACCTGATGTTAAAGGCAGAAAATTTACCTGATCCAAATGTTTGAGTTCCATTCAATCTGGC ACATTGATATAATTTGAGAGGATATGACAACACTAGCTAACTTTTCTTCCTCTTTCTTGAAGCCTCTAGTAGTGCAGAAT ATGAAACTTCTGGATCCAGTGGGCCAGGGACTGCTAGTGCTACAGGTCTTACTAGCATTATGGTGGCGAAATCAATGGAG TTCTCATATCAGGAACTAGCGAAGGCTACAAATAACTTTAGCTTGGATAATAAAATTGGTCAAGGTGGATTTGGAGCTGT CTATTATGCAGAATTGAGAGGCAAGGTAGTGACCGTGTGTCTCTTCAGTTCTATAACATAGTGCATGTTTGGATACAAAG AGGAAAACCACGGTGAAGCCAAATTTGCGGTGGACAGACACAAAAGCTAAAGGAAGTTGTCACCATGATTTTCAATTGTG TATCCAAACTTGCACAAAAGAGGATAGAAGTTTCTTACATTAGAGTAGTAGTGAAAAGTTTAAATTTTAAGGCTTTGTGT TCATTGTGAGGAAGCTATATAAAACAACTCAAATCAGTTTAGGGCAAAAAATTGTTTCATTGAAAAGAAAGATAAGAGTA ATGATTTTACTTAAATGGATATTGTTCTTAAAGAGGTGGATGGGAAAGTTTCTGCTTTTTGTGCCACTTTAGGTTATCCC TTTAACTTTTAACTCTTCCTGGATTTCCTCTAATGCAATTTATTCAATGCAGAAAACAGCAATTAAGAAGATGGATGTAC AAGCATCAACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCACCACTTGAATCTGGTACAACATCCTTCAAAC AACTTAAAGCATTATTATATCTTTGGGAAGGAAAGATTAATATTTTTATGTTTAGTTTGAAGAATCATTAGGTTCTTACA AAACAAATATCCTTCATGGTTCTGTGAACTGAATAGTCCTATAGTTATCCAGCAAAATTTCTGCAGATCCACATGATAGT CCAACATGGGATCTGCATTACTAGTGAAAGAACTTGTAAAACATTTGTAACTTCAATTTTCTGTCCTTGAAAGTAACAGA CCATTTAGAGCACACTCCCCAACATTAATACCAAATAAAGAAGAAAATCAGCCCTCTTCCCGCATGTGTGGTTCCACTGT GAAATATTTGAAAATCACTTGTGATTAGAAGCTACAAGTCTAAGCTTCTGAGCAAACGTGTCTTGGATTTTGTGCTAATC ATAAAGCCAAATATGCTATTAGTTAATGATTAAAGGCATTATTAGAAACTCCTTTATTTCCAATTGCCACTGTTGATATG TTATTTGGATTTTTCAAACAGTTTCTCCTAACAAACAGGTTCAGAAAAAAAATTAGTATTAATTTCTATCTATGATTACT TAAAGAAGAAAGTGCTAAATTCTTTCTGGGATTTCAATATAACTATATCATACACTTTTCATTTAATTTTTCTAATTTTG GAATCTTTGTTTAGCATAAACAGCTCTAAGTAAGTTATAATTCTTATTCTGTATGTACCTACTTTCTATGAACAACATAG GTGCGCTTGATTGGATACTGCGTTGAGGGATCTCTATTCCTTGTTTATGAACATATTGACAATGGAAACTTAGGCCAATA TTTGCATGGTTCAGGTGAGAACAGGATGCAGTGATATTTTTTTGCTGTGACATTATCAGCATGTTTGGATCAATTTCTCT TTCACCAGAATTAATTCTGAAACAGAGAAGTAGCTTCTCCACAGAATTGATTCTGACTTCAGAGTCAATAGTAGAATTAT TTCGAAACATGCACGGCATTATAGTCAAACAATTAATAATGATGATGACATGATTTCAGGTAAAGAACCATTGCCATGGT CTAGCCGAGTACAAATAGCTCTAGATGCAGCAAGAGGCCTTGAATACATTCATGAGCACACTGTGCCTGTGTATATCCAT CGCGATGTGAAATCTGCAAACATATTGATAGATAAGAACTTGCGTGGAAAGGTTGCATTTATTACCAATCTTCATGATCC AAATTCTTTCATTTCTTCTTTGAGACTTTAATCAAACTGTGAAAGTTTTTATGTTCAGGTTGCAGATTTTGGCTTGACCA AGCTTATTGAAGTTGGGAACTCCACACTACAAACTCGTCTGGTGGGAACATTTGGATACATGCCCCCAGAGTATGATTTT CTTTTGATGTTGTATTAATGGTGTTTTTGGATAAACAGTTTAATCAAAAGTTGATGGTAATAAACACCTATCGCATAAGT GTTTATTCATAAACTATTTTGAGATGTTTATTGAGATAAAGTTAAAATATCTAATGAGTTTAGTGACTTATGAAAGTAAG CTCTCAACAACTTATAAGTAGGGTATAAGGTATTTACAATACATAAGCTCTAACAAGCACTTAGATACACACATTTGAGC TTATCTTTCACAATAAATGCTCGTACAAGTGTTTGAGAGAGCTTGTGTAGCTTATGCGCTACCTAGAAGCTGATTTGAGC TTATTTTCACAAGTTGTTCATATTAGCTTATGAATAAGAGATTATGCTTATATATAATTTATTTTCAGCTTATTTCAATA AGTTCATCAAATTTGCTTATGAATAAGTGCTTGTGCGACAAGCGCTTATTGCTACAAGTGCTTAATTACGCTGTTTACCC ATAAACGTGTTCAATTAGTAAAGTCAAGTTCAGTTTTCAAAACATATCATTGAGTGAACTTGTTTTACCTGGCTTTTATG CAGATATGCTCAATATGGTGATATTTCTCCAAAAATAGATGTATATGCATTTGGAGTTGTTCTTTTTGAACTTATTTCTG CAAAGAATGCTGTTCTGAAGACAGGTGAATTAGTTGCTGAATCAAAGGGCCTTGTAGCTTTGGTGAGTCTACATGCCCCT TCTCTAACCTTATTTACAAACCAATTACTCACAATTTCGAAAATTTTACATGTATATTTCAAAGCTACTCAGCACAAATG CATTTGCCCTTAACTTGCTTTGCATTGCAGTTTGAAGAAGCACTTAATAAGAGTGATCCTTGTGATGCTCTTCGCAAACT GGTGGATCCTAGGCTTGGAGAAAACTATCCAATTGATTCTGTTCTCAAGGTGGGAGCAATTCTCACTAAAATTAATTTGA AATGAATTACTATCATTTAGTCACTTGAATGACTTTTTTTATCAGAACATAAGCAGGTTGTGTCTAGTTTTCTTTTGGTG GGTTTAGGACTTAAAGTTATCTTAGTGTAAAATTTTCTCATTTTACTAAACCTTAATGCTTTATTGTTGTTTGAGTTGCA GATTGCACAACTAGGGAGAGCTTGTACAAGAGATAATCCACTGCTAAGACCAAGTATGAGATCTTTAGTTGTTGCTCTTA TGACCCTTTCATCACTTACTGAGGATTGTGATGATGAATCTTCCTACGAAAGTCAAACTCTCATAAATTTACTGTCTGTG AGATAAAGGTTCTCCATGCAAATGCATGTTTGTTATATATATCTTGTAGTACAACTAAGCAGACAAAAAGTTTTGTACTT TGAATGTAAATCGAGTCAGGGTGTTTACATTTTATTACTCCAATGTTTAATTGCCAAAACCATCAAAAAGTCCTAGGCCA GACTTCCTGTAATTATATTTAGCAAAGTTGCAGATTCTAAGTTCAGTTTTTTTATATATAGGTTTCAGTATTTTTTATAT ATATTATTTTATAAATTTTTTAACTTGTTACAATATAAACATATTTGCATTCATCTTCAAATCTTTCAGAATCACTTCTC CTACCACAGAAGCTAATAGAAGTGTCTTCCAGAATCAATTCTTCATCCACTGTGAAAATCTACTATGTATCAAAGCATGC ATTGTGTTATATGTTTGGAAAGTAACATTAAAACAGCATCCGCCAAACATCCCGCGTAAACTTTGAGCTGGTTGGAGTAA CTTTTATAACTCATACATATGCATCACATTTAAGAAAACAAAAATGAAAACCTTGGAGGACCATGGCACCAATATGTTGA TGGTTTTGCTGGTTTTTATCAAATTAGTTGAGTGAGAAAAGAAGTCTGGTTGAGATGTTGTCCTCCCTCACAGCCATGAG TTAAATTAAACACGGATGAATCCTTCGATAACCTTGCTGCTTGTGGGGGTGTTATTAGAGATCATGAAGGTAGTTTGCTG TGGGATTTTCTGTCAAATCAAGCAACTGTCCTATTCTCCAAGCTGAGGTATGGGGAATTATACATGGCGTGAAGATTCCT TTATGAAGGGGATTTTCTACAATCCTAATTGAATCTGATTTTGAATTGGC
CDS sequence (LotjaGi1g1v0062600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATGTTAGATACCAGAAGAAGGAAGAAGAGAAAGCTAAATTGCCAACAGATATTTCTATGGCCCTTTCAACACAAGA TGCCTCTAGTAGTGCAGAATATGAAACTTCTGGATCCAGTGGGCCAGGGACTGCTAGTGCTACAGGTCTTACTAGCATTA TGGTGGCGAAATCAATGGAGTTCTCATATCAGGAACTAGCGAAGGCTACAAATAACTTTAGCTTGGATAATAAAATTGGT CAAGGTGGATTTGGAGCTGTCTATTATGCAGAATTGAGAGGCAAGAAAACAGCAATTAAGAAGATGGATGTACAAGCATC AACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCACCACTTGAATCTGGTGCGCTTGATTGGATACTGCGTTG AGGGATCTCTATTCCTTGTTTATGAACATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTTCAGGTAAAGAACCA TTGCCATGGTCTAGCCGAGTACAAATAGCTCTAGATGCAGCAAGAGGCCTTGAATACATTCATGAGCACACTGTGCCTGT GTATATCCATCGCGATGTGAAATCTGCAAACATATTGATAGATAAGAACTTGCGTGGAAAGGTTGCAGATTTTGGCTTGA CCAAGCTTATTGAAGTTGGGAACTCCACACTACAAACTCGTCTGGTGGGAACATTTGGATACATGCCCCCAGAATATGCT CAATATGGTGATATTTCTCCAAAAATAGATGTATATGCATTTGGAGTTGTTCTTTTTGAACTTATTTCTGCAAAGAATGC TGTTCTGAAGACAGGTGAATTAGTTGCTGAATCAAAGGGCCTTGTAGCTTTGTTTGAAGAAGCACTTAATAAGAGTGATC CTTGTGATGCTCTTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTATCCAATTGATTCTGTTCTCAAGATTGCACAA CTAGGGAGAGCTTGTACAAGAGATAATCCACTGCTAAGACCAAGTATGAGATCTTTAGTTGTTGCTCTTATGACCCTTTC ATCACTTACTGAGGATTGTGATGATGAATCTTCCTACGAAAGTCAAACTCTCATAAATTTACTGTCTGTGAGATAA
Protein sequence (LotjaGi1g1v0062600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYVRYQKKEEEKAKLPTDISMALSTQDASSSAEYETSGSSGPGTASATGLTSIMVAKSMEFSYQELAKATNNFSLDNKIG QGGFGAVYYAELRGKKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGSGKEP LPWSSRVQIALDAARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGNSTLQTRLVGTFGYMPPEYA QYGDISPKIDVYAFGVVLFELISAKNAVLKTGELVAESKGLVALFEEALNKSDPCDALRKLVDPRLGENYPIDSVLKIAQ LGRACTRDNPLLRPSMRSLVVALMTLSSLTEDCDDESSYESQTLINLLSVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 45 | 45 | - | – | |
| MobiDBLite | 1 | 16 | 16 | - | – | |
| PANTHER | 2 | 370 | 369 | 1.6E-191 | – | |
| PANTHER | 2 | 370 | 369 | 1.6E-191 | – | |
| MobiDBLite | 19 | 45 | 27 | - | – | |
| Gene3D | 42 | 143 | 102 | 1.5E-26 | – | |
| SUPERFAMILY | 52 | 343 | 292 | 7.93E-74 | ||
| ProSiteProfiles | 73 | 346 | 274 | 37.008 | ||
| SMART | 73 | 345 | 273 | 3.1E-32 | ||
| Pfam | 74 | 340 | 267 | 9.4E-44 | ||
| ProSitePatterns | 79 | 101 | 23 | - | ||
| Gene3D | 144 | 366 | 223 | 2.8E-53 | – | |
| ProSitePatterns | 188 | 200 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0062600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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