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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0063100 |
| Transcript ID | LotjaGi1g1v0063100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RmlC-like cupins superfamily protein; TAIR: AT2G32180.1 plastid transcriptionally active 18; Swiss-Prot: sp|Q86AG7|KIME_DICDI Mevalonate kinase; TrEMBL-Plants: tr|B0BLJ6|B0BLJ6_LOTJA CM0545.540.nc protein; Found in the gene: LotjaGi1g1v0063100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:8764823..8774892) extracted from Lotus japonicus Gifu genome v1.2.
TTTAAAACAGAGGCGTGTCCGCGTGTCCGACACGCAGACGACACAGACACGCCACCGACACGTGACCGACACGTGTCGGA CACGTCTGAGGCGTGTCTGAATAAAAAAACATTATTTCTTGGCTCGGACACGGCTTGGACACGGCGTGGACACGACTTGT ATATTGAGCCGACACACCTTTGTGGCTGGACACACATATGGGACACTTTGTACCATTTTTTTATTATTTTCTGACTTAAA AAAAAGATAAATTAAAAATAAACAACCTTATCTAATTAAACATCAAACAAAGGTAATAAAAAACAATGATTCAGTGGGCT CATAACGCACAAACACGACTCTTCTCCTCTCCTCTTCTCTTGCGTGTTTCATCTCCTTCCTCCGCCAGCGGCGGCGCTCC TCCTTCTCCACCAGCGGTGACGTGTCCTCCTACCTCTTGGTCTTCTCTCTTGCTTCCCTTCTCTGTTACTTGAAATAGGT AAGACCTTTATTTTGTTTTCACTCTGATTTTGCTTGATAGGGAGAGTGAGCATGGTTAGATTATTTGTGTTTATGAGTAT TGGATATTGATATTCTGGTTTTTGCTTCCTTCTTTGATGTACTGTGAAGGCTTTCTTCCCTTGCTTTTATTGGTTCTTTG TTTTTCCTGTTTGTAATAGGGTTTGCACCCCTTAAGTGCAATTCATTTATTCAATCTCATTTTACTGCACATCATTGTAC TTCAGAATTGTAAGATCAATCTGATTAGGTATCAATAGTGTTAATTACAAATATACAGATATACTATCCTAAATTAGTTT CTTAAGGTTGTGTTTGGATGGAGGAATGTAGAAATCCAAGGGATTTTAAATGTTAGGGAATTCAATTGATTCAATTGAAT TTCCTTGATTTTCAAATTCCCTTGTTTGGATAAGGTGATGAAATTCCATCAATTTTAAAATTCTTTGTTTGGGTAATGCT AGGGAATTCAATTGAATCAATTGAATTTCCTTTATCTTATTTTTTTAATCTAATTAATATTATTTGAATAATTATAATAA AATAAACTTAACTTAAAATCATCCCATAATTTTATAATCGGCCCAAACCCCCTGAATTGACTCAAAAATCTGAAATTAGT TGGATCACAACAGTGGCATAATGAAAAGTTGGAAACACTGTGTTTTTAACAAGTGCGAACATCAATCCAAACAAACATTC ATAGAGATATCACATTTTCTATTATTTAAATTTCAAACTGTGTTTATAACAAGTGCTAACATCAATCCAAATGAAAAATA AATAAAACAAAGTCTCAACAGTGGCATAATGAAAAGTTGGAAACACTACAAATGAGTCCATAAACTATAGCAAATCACGA ATCAGTGCATAAAAGCTAAGATGTAATCTTTCTTTCTCTCCATGGGAAGAGCTTTCAAAATCAGCAAGTGCACGGTCCAT CTCCAAGTTCCAAGTAAAGTAAGCTCTGCTATCATCTTTCTTATCCTCGTTACTAGCTTCCGCCATTTTCCTTTTTCCCC TCATCTCTCCTTCAAACATAAACAAACATTAGACAATTACTAATAACCAGAAGAATTTTGAAATACATCCACAGAACTGA ACAAAGATAATAGCAGCAAAATGAGCTTCTATGATTGAATACATCATGTGCAGAAATCATAAGTGATTATGATCCTGATT GCTGTTACAGTTTATGGTAGGTTATTGTCTATTTGGAAATCAATACTGCATGTCATGTGCCCACATCTAGGATAGACTTG ATACCCTATTCGAATTCGGGCTAGACCTAACTTATCCCCAAAGACCAAAAGCTAAGGTCAAGGTGAGGATTGCTCTACCA TATATAATGACTTATTAAGCGATATCACTAGTCAATGTGAAAAATAAAAGTCTGAATCATATTACACCCTTTAACTAGAA AGATCAGCAATTCAGCATTACTCATACAACAAAGAGCTAATGAAAAAACAGAAGACAAAAACAGTAAGTAAACAAAATAG GAAATGCTATACAACCTGCTCTGCAGCCCGACCAACAAGGGTCATACAAGTCATATTGAAAAGCTGCTCCTTTGTCATGA GAAGGTTCTCACTCGGAACATACTGCGCAAATCCAAGAGCAGCTGTTCCACGAGGAACAATAGTTACTTTCAACAAGGGT TCAGAATGTTCCAAGAACCAACCTGCAACAGCATGGCCTGACTCATGGTAAGCGATAGTACGCCTTTCCAGCTTGCTTAT TACCTTGATATGAAACAGGGTATTAGATAAACTTTAACCAGTAACTGAAAAAAGCAAAGTGAGAGCTCCAAACTCAGTTC AATACTTTCAATTCATTGCAGCCTATAGTCTTCATATATCATGAAGTCTTAAATTGCAACAACAGCCAAAGAACAACTAT TTCTGCAGATTAGATACACAGATAGAGTAGAAGATTTGGGGTATAATGGACAGTCTACTCAGGAACATTATCATTCTCCA TGGTACGTGTTAGATACCCAAACTCACAATCACAGTAAACAGAGTAATAACTGGGAAATGAACTGTTGATGATTGCTTAT TTATGAAAATGGAAAGATTACAGAAGGGAATGGTTCCCAGATTTCTGCCCAGAGCTAAGCTCCTATAGGAAGCTAATGCT TCCTACTCATATCTCTATCACACAAAATATCTCGATACCTCTCAACCTCTCTCTAGTCTTCCTTATATTCAGGGAAGTAT TACAATCATTCTCTCTCACTATTCTGTTAGTCCGTTACCTAAGATTCCTTTCTTTACCTCTTCTAGAATATACCTTCCAT ACTCTAGGACCCGCTCTCTCATGTTGGGCCAAACTCTCTTGTGGGCTCTTCACTTCTTCAGTCCTAACAGTACGTAACCA AATATCATGTGGAACAATATTTATTAAAATAAATGAACAATATTATCTGCTAAAGCTTCATTTTTCTCACAATGATGATG AAAGGAAAGTAATATGGAAAAAATGAAGGCTACAACTATGCCTATAGTGTACAGATCTTTTATAAACTTAAATACTAAGC CCTACCCTGCCTATTTCCTATAGGCTAGATCTTTCTAAATATGAATATAAAAACTAAAAATGGCATACCTTGTTCTTCTT CTCCAAACCACCAATAATCCTATCAATAGCTGCCTCAAAATGGTCCATTGTGACTTGTGTTTTGTCACCTCTTGCAGCAA TCAGAGCAGCTTCATTGCAAACATTAGCAATGTCGGCTCCAGCAAATCCTGGAGTAAGGGCTGCAAGTCCATTTTTCGCC TTTACTTTTAAATCCTGAAATAAACATATATGTGTTTGGTTTTATGATGAAATGTTCTAAAATAAATTCAGACTATAAGC TGCAAGTCTTATCTCTGTGCAGATTATAAAACTAAACTTGGACATAGTAGCAGAGTTGATGGACCCCTTTTCCAACTAAA CTTAATCTATTCCGGAATAACCACAGCAATGAAAATGTAATAAAATCTCCTTTACTCCATAAATTCTTTTTGCTGATAAA TTAATTCATCTTTTAATACTACCTAGTTATTATAGCAAGACAATATAGCAGCAGCAATGAACGTCTGAAGTGTAGTGAAA AGTTCTTTCTATCCTAATATGTCCATGGTTGTTTTGAAATAAAACTCACTACAAATATTAAAATCACAGGCTTGACTATA AGATGAAATGAATAACTTTACCTTCTTCTTTCTGCACTTCTTGGCAGAAGCAGAGTTGCTAGTGTATCCACTTATAGCAG TAGCCTGAAATATTTTTCCGATCATCAAGGATTAGCAAAAAACAGTGACAATAAACACAAATCACTGTCATGACAACTTG AATAATGCTTGAGGAATGCAATGCACCTTATTATATATAACACACATCATGCTATTGCTACTTGCTATAAAAATACTCTT TATTCATCAAACTCCTTCTCTGCATAATGGGTTTTTGTCCCTTTGTTTCTCCCCAAAACCATCCTAATCTAGAAATACAC CTACAAAAGCATACCATCACCATGGAAGGACCAAAGAAATTCCAAAAGGGTGGTTGGAAATCAAGGTGGGTCAAGGCCAA GAGCAACAGAGGATTAAAGTACCTTTGATTTACACAAGAATTGAGGCCTAGTCAATTTTCAGATTCAGTTTGAGCAATTC TTATGTAACTCTAATTATTGTTTTGGTAAAAAAATAGAAACTATTGCCTTCCTCACCTATGTTCATCTGCTTCTGAACCA GGCACAAAATGGAGAAAAAAAACATCACAAACCCAATACTAGCATCAACGAACAAAACTCAAGACAAGAACAAAACAGAT ATTTTCAACTCCAAAAACAAAATCAAATTCGAAAAAACAACAACAACCACAACAACAATACTGCAAAATTTGTGAAAGAA TCAAGAGATTTTACCTGAATCAAGAGGGAAGAAAGAGCCACTCCATGAATCGGGAGAGCAAGAACGAGAGAGCGAGATTG CAGAGAGAGTGAGATCGGGATTTGCAGAGAGAGTGAGATCGGGAGAGCGAGAACGAGAGAACGAGATCGCGAGAGGGTGA GATCGGGAGCGAGGGTGAGATCGAAAGAGCGAAATTGCAGAGAGAGTGAGATTGGGAGCGAGAACGAGAGTGAGAGACAC GAGCAGTGAGGGATTTTCCAATTACTTCCTATTTTGAGGGTATTCTGATTACCCGATAATCCCTCAATTAAATTACCTCT TTTAATTACCAGTATTTTCAGAATTCCACAAATAAATATCCAAACAAGGTATTTCAATTTAAGGGATTTAAAATACCCTC TAGAATTACATTCCCCCCAAAAATCACCCCATCCAAACACAACCTAAGGTTTCTCCTAATCGATTATATTATATGTACAT ATACACTACCATAAATATGTAAGACTTTCTGAAATTTTTGATTACCATACAGTCAGACTAATGATTGAATGATGTTTTAG TTCAAACTCTCCTAATCTTTGGTAAAATGTAGCCTGATATTGATAAATAGTACAATTTTCAAGCTTCTTTTGCTTCTATT AAGAAGCATTGTTACTGACTTAATTGTGTGTGTTATTGTATTGAATTGATCAACATATTATAGTACAATGTTCTCTTAAT TTTGTGAACATATTATCATGTTTTTTTAATATATATATATATATATATATATATATATATATATATATATATAAGCCGTG TCCCCGTATCCTATTTTTTAGAGTTTAGCCGTGTCGGCGTTCCCGCCCTGTCCGTGTCCCGTGTCCGTGTCCGAGTCCGT GCTTCATAGGTAGTATGTCAGTATGTGTTATTGCCTTATTGGCTTCTTAAAATTACAATAAAGTTGGATACGTTGACAAT CCAGCAAACAAACTTACATAGGGTAGGAGAGAGACTGAGCAGCTTCACTGCACTTTTGCACTACAGAATGTACAGAAGGT TATGTCATAGTGAGTTTTTTTGTGGGTATATGGCAGTTAAAAAGTAACAGGGATTACTCATTGGAATTGAGGAGGCAATT CAAATGTGTTGATTCCTTTTAGAACTTTTATTCAATGCTCATCATTAAAGTTGGAGGTCTTTGAATTTCTTAAAATTTTC TTGCAGATTTCTGCTGTTTAGCAAGTGAAGCACATTGAGTGTGAACTGTGAACAAGCATGGCAAGCTTGATCACTGCATC AGCCTTCACCTATTCTCCTGTCAATGGTTCAAGGGGTTTCAGAAAGTCAGGTAACTCTTCTAGAGGAGGAGGGTGTTGCA TAAAAGCAATGAAGTTGGAGAAATCCTTGGAGGAATTGTACAATGTGAAGGTGGAAAGAAAAGTTTCTCCTGAAAGACTA GCGCAGCTTGGAATTTCAAAATGGTCAGCGTGGAAGACTGGAAAATGCAAGTTGGCTTGGGACTGGCAGGTAGACCAACT GGTGTACGTAGAAGAAGGTGAAGTGAGAGTTGTGCCTGAAGGGAGCAAGCGATTCATGCAATTTGTGGCGGGAGACCTAG TCCGGTACCCAAAGTGGTTTGAGGCCGACCTCTGGTTCAATGGTCCATATCAAGAACGCTATAGTTTCCGAGCATATGGT GACGACTATTGATGATGATGCATGATGGTCATGAAATGTGTGCATCTTATTTGGTTGTTTAAAGCTATGTAATAGATTTT GACCACACAAAAAAAGCTATGTAATAGTTGAGTTTCAGAGTTTCCAGTTCTATATGTATTCTACCAATATATTTGATGAG TACTTATGATCGTTTGCTGTCATTTAAAAGAAAATCCTGAATGCTGTTTGGTTTTCCATGTTTTTGTCTCTATGCAAGGC AAGACTTGCCAATGAGTTCAGCTACACCAACTTTTAAGTAATAAATAAGAAAAGGTCCAATGAAAAGCACCAAATTCTGA ACATGTCATGGCCCCTCTACAAAAATGGATCCACTATGACAAACAGTTCAGCTAACAAAGGGACAACTAGCAACTGATAG AGAAAAGAGTATGTATAAACATGTCTTGAGACCTTTACCTGTAGAGGCTTAAAAGTAACAGAAATTACAAATGTTACAAA TTACAGAAAGGTAGGTTGCTTTTCTATCACTGCATAATCTCAATGGCTAGAAAGCCTGGAATTATAAACAAGTATTGCCA GTTATAAACAAGTCCATTATGGTATATATATGCCCCATGGCTCTCAAGACCACAAAGGATGGAGCAAGATCTTGCAATTT CTGCCAAAACCACCATCTAATTTCTTAGTGGAGTAAAGCATGTTAGACTTCAACGCAATCCATTCACCTTAGTTCCTCAT CATGGGGTCAGAACTTGCAATTTGGATCTTCCATGGCTCTTAGCTACTAGCAGCTGCTAGTTGATTTGCACTGGTACCCA CTGTAACAGATGAGACAAACCTCACAAGGGCTGCCTCATTGCCTAAAGCTTTAGCTTCCGCAACACTTTCCAAATGTTTC CATATGGATTCTCGCTTCTCCTGCTCCTCCCTACCCTTGGTTTCATCTTCTTGGAATCTCATCAAGCATTCATCAAATAG TGTCTGATCAGCATCATAGAATATTTTCCTCACATTCAGCGTCAACCTCTGAATAGCTTGATTCCAATGGCCACTTACAT TTCTCTCCAAAGCAGGGAAGATTATAGGCAGAATCACTTTTCTGTTTCGTAAGATCAAATTTCGAATATGATCATTGTTC CACAGAAACAGCGCCCGTTCAGCTACCTGCCAATAGAACCAAGTCAGCATCAAATTTAGTTCACAAAATCCCAGGTAAAT TCTAATTGATCATTGCTTCCATAGTTACACTTCCATTGCTTCTTTGAATCTTTGAGCACTGATTCTTGAGAATAAAAACT TGTACTTAAGTATTGCATCACAATGCAACTCATAACACAACACAAAATCCTACAAATTCTATAATTGTCCCAAGTACAAG TTATATTGTAAAAAAGCCAACCATATATATTGTGGGGAACACAAGTTCAACTTTCAAGCAAAATTGAAGTATGATTCACA TGAATCAAGATCAGATATCATAGAGATCTGAACTATTATATTTATATTATAGAGAGGCATAAATTAATAAGATACTCTCC GAGGTGATCATGAGATACAAAAAGGATAGTCACACATGTTTAGGTAAAAAGATAAAAATGCCAATGTGAACATACTACTG TTTGGTTTTCACGTATCAATACAACTCGTCATCAAAAATCTGAAAACAACAGTATTTACCCAGTTCAAACAAGCCTTTCA CAGGTTATGAACTTGATATCATATAACTTCTAAACAAATGAGAGGATAAATTCAAGGTTGAACAGACCAACAAATTTGTC CACAACATAATCATGAACCAAAAACATCTAGAAAGAGAGAGCAAATGAAATAGTGTTCTTAAAACTGACTAACATCCAAA TATCAGAGAATGAAAAGAATCTAAAAGTAAAAAGAAGCAGAGATGACTGGTCACTGATGTTGGCAAATGCTAATTAAATG AATGTAGACATCATGTAAAAAAAATTATGTGGGGGAACTTTGTAAGCACCTGAAAGTGTAAGCTGTTCAGGCATCTTCTA ATTTGACGAAATAATGGGATCATGCATCGCTGAAATTCCGCTGCTTGAGTTGCCTCTAAAACTTCCTCCAACTCACCAAG GAACATAACCTGCTTTGCACTATTAGTTATTGGCCAATATTTCAAAAGGCCTCTTACCACAGTGTCAGCCAGCTTGACAT CTTTCTCAAGAAACTGAGCAATGCAAAAAGCAAGTTGCTGGTGATAAAAAGGAACACACTTCGGCTTGTGAAGGGGGACC AGTGCGCGGGCAAGGAACAGCTTATGCTCTTCCTTTAAAGGCAAAGCAAATCCATTAATTATGCTGCCTAATATCTCTAG CAACTCTACAATCCCACTGTGTTTCTGTGTCTCAAATATGAAACTGTAAAAGATATTGTTGATCGCTTTTCGAATGAACG GCCGATGCACCATGAACTTCCCGTAAATTCGGTGGAGAATCTTCTTCAGGTAATCCCTCTCTCTGGGGTCCTCTGACTCA AAAAGGTCAAGCAGCCTCAACACAAATGAATGATCAATGTATTTTTTAGCAAGCTTACCATCTACCTCTGGTGAAGCCAC AACTCTAAAGAGAAACTCATACACAAACTGCAGATGAGGCCACGCAGGCTCCATAACAGGTTCCTTTTCCTCAGGCTCAC CAATTTCCACAAACTCGCCATCACGATTGGAAGACGGCAGAGCACGAAACAAATTCACCGCCACCATCTTAGTCATCTCC TGCAATGCTAACTCATTGAACTTCGAATTCACGGACGAAACATAATCAATAAGCTCGAGTAAAGTCTGCCGCTTGATGTC CTTCTTCTTGAGATTCTTGGAAGGATCATTGAAATCAAACAGAACACAACACATGTTCAACTTCCTAATAAAAAGATTAT GCTTTTCTGAGATGGGAACATTCCTAAAACTTGGCAAAGCCTCATAAACTGCTGAAGCCATTGCAGAAGCTGATTTCTTA GCTTGATTGGTTTTGTGTAACACAATTACTTTCATTCCCAGAACAAAAACCCAAATAAACCACAATCTGAAGATTTTGAA GAAACTGAATTGGATTGGTTTCAAGGGGGTAATGGAATTGAAGCCTTAAGATGAGTTCAGTGATAAAACACCATTGATAA ATCACATTTTTATCATATACAGAACGCCCCAGAAACCAGAACAAGAAAAAAACAACATGGGTATTCAAGAAATGAATCAA AGTTTCAACCTTTGACTAATAACATTATCGAAATCAAAGAGTGAAACATTTGAGAAGTTAAGGTTTAAGCATGCCCAGAA ACCTTAATCAGAACAAAAAAAAATCTGAGTGAAAATCAGAGTGACAGACAGCATGAAGAAGTGAAGAGCACTTACAGTGA GAGAGTAAGGTGGAGAAGAAGATCCCACTCAAGTGAGAGAAAATGCAAGAAAATCAGAGAGTAATGTAGAGTGATATTAT TTTGTTAATTTTATAGATGAGTTGAAGTTTATGAGTATATTGATATGATTTTAATGGATATCTAGCGACACTTCGATTGT AAACAATTTTACACCGATAATCAATTAATTTCATTTTAAATTTTGATTAAAATAAAAATATATTTTAAATTAATTGTTTC TCCTATAAAACTAAAAGCTTAATTGTTCACTTAGTTTAAGATTGTGATCTTGGTCTCCATAATTTTTATCAAGCTAATCA AGTTCATTTACTTTTAAAATTAAGGAAATTTTGAAGGATTTTAAAACATATGAGATTAGGGTTTAGAGATGTTGGAATTT AGGATTTTTTACTTCTATTTAAATTTAATACTCTGATTAGTAGTTTGTGTGGGAATAATGTCTACAATGACTATATTGAT TCAATTTGTGAAGATTTTTCTTAAAAATGAGAATATGAAATTTTTAAGTAGAATAACAATGATGAGTAACTTGATTTGAA ACAATTAAAAAGTTGATGGGCTAAATATGCTCAAAAAACTATTGGGGGAGTAAAATTACCAATAGTCAAA
CDS sequence (LotjaGi1g1v0063100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAGCTTGATCACTGCATCAGCCTTCACCTATTCTCCTGTCAATGGTTCAAGGGGTTTCAGAAAGTCAGGTAACTC TTCTAGAGGAGGAGGGTGTTGCATAAAAGCAATGAAGTTGGAGAAATCCTTGGAGGAATTGTACAATGTGAAGGTGGAAA GAAAAGTTTCTCCTGAAAGACTAGCGCAGCTTGGAATTTCAAAATGGTCAGCGTGGAAGACTGGAAAATGCAAGTTGGCT TGGGACTGGCAGGTAGACCAACTGGTGTACGTAGAAGAAGGTGAAGTGAGAGTTGTGCCTGAAGGGAGCAAGCGATTCAT GCAATTTGTGGCGGGAGACCTAGTCCGGTACCCAAAGTGGTTTGAGGCCGACCTCTGGTTCAATGGTCCATATCAAGAAC GCTATAGTTTCCGAGCATATGGTGACGACTATTGA
Protein sequence (LotjaGi1g1v0063100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASLITASAFTYSPVNGSRGFRKSGNSSRGGGCCIKAMKLEKSLEELYNVKVERKVSPERLAQLGISKWSAWKTGKCKLA WDWQVDQLVYVEEGEVRVVPEGSKRFMQFVAGDLVRYPKWFEADLWFNGPYQERYSFRAYGDDY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 143 | 143 | 4.1E-68 | – | |
| PANTHER | 1 | 143 | 143 | 4.1E-68 | – | |
| Phobius | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 12 | 11 | - | – | |
| Phobius | 13 | 17 | 5 | - | – | |
| Phobius | 18 | 144 | 127 | - | – | |
| Gene3D | 37 | 137 | 101 | 1.1E-18 | ||
| SUPERFAMILY | 57 | 132 | 76 | 1.13E-7 | ||
| Pfam | 62 | 130 | 69 | 1.1E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0063100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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