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IPR008579 is a (S)-ureidoglycine aminohydrolase, cupin domain.
<p>This is the conserved barrel domain of the 'cupin' superfamily found in (S)-ureidoglycine aminohydrolase (UGlyAH or UGHY) from E.coli, with a conserved jelly roll-like β-barrel fold capable of homodimerization. This enzyme is involved in the anaerobic nitrogen utilization via the assimilation of allantoin and catalyses the second stereospecific hydrolysis reaction (deamination) of the allantoin degradation pathway, producing S-ureidoglycolate and ammonia from S-ureidoglycine [[cite:PUB00078751], [cite:PUB00096858]].</p> <p>This domain is also present in EutQ family from the eut operon, involved in ethanolamine degradation. EutQ is essential during anoxic growth and has acetate kinase activity [[cite:PUB00096913]]. The cupin domain from EutQ does not possess the His residues responsible for metal coordination in other classes of cupins [[cite:PUB00063996]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | RmlC-like cupins superfamily protein [Theobroma cacao] gi|508702372|gb|EOX94268.1| | 8 | ||
| – | Cupin domain-containing protein [Arabidopsis thaliana] gi|15235021|ref|NP_192768.1| | 9 | ||
| – | RmlC-like cupins superfamily protein [Theobroma cacao] gi|508718920|gb|EOY10817.1| | 9 | ||
| – | RmlC-like cupins superfamily protein; TAIR: AT2G32180.1 plastid transcriptionally active 18; Swiss-Prot: sp|Q86AG7|KIME_DICDI Mevalonate kinase; TrEMBL-Plants: tr|B0BLJ6|B0BLJ6_LOTJA CM0545.540.nc protein; Found in the gene: LotjaGi1g1v0063100 | 13 | ||
| – | RmlC-like cupins superfamily protein; TAIR: AT3G04300.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q2SC73|Y5068_HAHCH UPF0345 protein HCH_05068; TrEMBL-Plants: tr|G7KYK0|G7KYK0_MEDTR RmlC-like cupins superfamily protein; Found in the gene: LotjaGi1g1v0702200 | 8 | ||
| – | RmlC-like cupins superfamily protein; TAIR: AT4G10280.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|O34767|OXDD_BACSU Oxalate decarboxylase OxdD; TrEMBL-Plants: tr|I1MQ98|I1MQ98_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0162700_LC | 12 | ||
| – | RmlC-like cupins superfamily protein; TAIR: AT4G10300.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9ZFV5|EUTQ_SALTY Ethanolamine utilization protein EutQ; TrEMBL-Plants: tr|I3SX59|I3SX59_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0195300 | 9 | ||
| – | RmlC-like cupins superfamily protein; TAIR: AT3G04300.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P26496|PHAC2_PSEOL Poly(3-hydroxyalkanoate) polymerase 2; TrEMBL-Plants: tr|A0A1J7FS28|A0A1J7FS28_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0206000 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 12.50 |