Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0079800.1

Overview

Field Value
Gene ID LotjaGi1g1v0079800
Transcript ID LotjaGi1g1v0079800.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Exostosin-2; TAIR: AT3G55830.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|Q9LY62|GT644_ARATH Glycosyltransferase family 64 protein C4; TrEMBL-Plants: tr|A0A0L9UW14|A0A0L9UW14_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0079800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:11527167..11534003) extracted from Lotus japonicus Gifu genome v1.2.

TTTGTCATATTTTATCCTTCTTTTAGATCTTTAATAAAGCAAATTGTTAATGAGCACAAGTTGCTCGATCCATCATCCAT GCATCATGTCCAATATTCTACACAACAAAACAAACAAAAATTAAAAAAAAAAATAGAAACTAGATGAATGCCCAATGCAT GATAGATTTTATTATAAAGAAAAAACAACACATTATTATTCATATCATCTTGAGTTGCGTACAGAAAACCAAAACACTCA AACACCGCCATCTTCCTCCTCCGATCCGATCATCCACCGTCGAATTAACCCTCCACGTGGTAACCACCACCGATCACCGT CGCCGGAGCTCAACCAATCACGAAAACCTTGATTTTCAGACAGAGACACTCGCCGATAAATGTGACCAAATCAACGCTAG CCATTAGATTTTCATTCTCCTTCAAACGCGCGTAGCTCACCAAACTTGAAATCCAATCCCAACCTCTCACGTTTTCCTTC TCCGTCGTCGTCGTTTCTTCTGATTCCGGTTCGCTCGGGCTATGCTTGCTGCTGCTACGCCGGCTCGCCTCTGAACCGAA CCGGTTGGTTCGATCGGCGGCGGTGGATGATGAGAGGGAGCAGCTGCTGGCTCAACCGTCGCGCGGAGCAGAGGTTCCGC CTGCTCGCGATCTCCACCGTTAAATCAGCTAAGATCAAGCTTCTACTCTTCTGTTGCGTCGCGTTGACGCTTCTCGCTTT CTTCACCAGCGCTTCCTCTTTCATCTTATGGAACAATCACACCCCTCCTCTGCCTCATTCCTCTGATTCCAGGTTCGTTT TTCTCTGTGGTTTCAAAATTTGATCCCTTAACTGTTTGTAGTTTCTATTTTAGAATTGGAACATGACAAAAAAAATGGTA TGGTTTGATTGACCTTAGCATAGGTTTATAGTAGTTTGGATGGAATGATTTAAGATTGGTTTAGTTTTGATAAGATGTTC TGTTTTGGAAAGTACTAGAAAATCTCAGTTCCTTTGAGGGAATTTCCATATATGTGTTAGCAAATAAGATTCTGTTTGAT TTGTGTTCTGTTGTCCTTTATGTTTGTTCTTTCATATATAGGAAAAGAATATAGAAAGTGATTTGGGTTGTATATTTGTA AAGTTCATTTTATAGAAAAAAAAAGAGATAAAAACAATGTTTAGTCTTGGAAACATTTTGTTCAGGTGAAAGTTAACTGA TCAGTGTTATTATTTGGAGTTTTGGATTGACTGTTTTTCAAGCTAAAGTGGCTCAATAAGCTCTTGGTGATGGGATTTTG GATATTTTTGGTATTCTCTGATGATGTCACTGTTATTCATACTGGCATACTAGGGACTTTACCTGGAATTTAGATCCTCT TTATTGCTTTTATGCAGTGATTATGAGATCACATCATGTGCTAGAATTTGGGTTGGTAACTGTGAATCTGATGGACTATT TAATGTTATGAGATTCATCACTTATTGTTGAGCTTTCTAAGTCAACCAACCATCTGGATTTGGGAGAAAGTTGAGTAAAT GAAACCTCCTGTCAAAACATTATTTGGGATTTGGTGATTTTGATAGTTGAATATTGTGTAGTGGGACTTGAGTGGGCATT GGCCTTTTAATTTAGATTGAAGATGGCACCTTCCAACTTTTAGATCTTGTTCAGAGTTCATATCACATATTTCAGTTGTA GCATTTGTGGGTTAACTAGACTCTGCACTATGCTTACTTGGTCTTATTTTCCTTGGGGCTAGATAATTAATCTAAATAAG AATGGAACCGCTCTTTCTTTTTCATATTTTTTCCCGCTCAAATTTGTAGAATATAGTCTATTGTTTGTCTTTTAAATTCG AACTCTAAATTTTATTTTCTGAAGGAGTCCTGAGGGAAACATCAGAAACTCATTGTCGTTTATATTTGTTCACAGGAAAG GATATTCTATCGTAATGAACACGTGGAAGAGATATGATCTCCTAAAGCAGTCAATCAAGCACTATTCATCATGCCCTCGT CTTGAATCGGTACATATTGTGTGGAGTGAGCCCGATCCTCCTTCAGATGCTCTTTTAAAATTTCTGCACCATGTTGTGAA GTACAAGTCTAAAGATGGGCGACAAGTGAAATTGAGGTTTGATATCAACAAGGAAGACAGTTTGAACAATAGATTTAAAG AAATTAAGGATTTGGAGACAGATGCAGTCTTTTCCATTGATGATGATGTCATATTTCCTTGCTCTTCAGTGGAATTTGCA TTTGATGTTTGGCAAAGTGCACCTGATACAATGGTGGGGTTCGTGCCTCGGGTCCATTGGGAGGATCCATTGGTATGTTT TTTTTACCGGATCACTGTCCATTATCCCTGCTAATTTTTGTTGCACAATATTTCTTTTATTCCTCTTCTTTTGGAGCTCA AATGTGAGAGAAAGTGAATGACTAATTGAGCATGCTGCAAGTCAACCCCTTTTTTATTTTAATTTTCTTCCTTTATTTCC TGTTTCTTTGTTTACACTCTAGTATTTAACCTCTAATTGCCTTGATTCCTAGTACTATTTACCTTTCAAGACTTACTTTG CAAATTGAAAGTGTACTTTTGTGAAACATTTGATGTATTGTATAGATCCATTTCAAATTTGAACTTGATCCCAGACTGGC ATCAAAACCATAAAAATAGCACATTTTGTATATCACACATGTATTTTAGTTTCTAAAGTTGACCCTCATCATAAACTGGG GACCTGTTATATCATTCTTGGTGAGGTTCTAATTTGAAGAAAATGAATCTGAACTGCTTTTACAGAAAAATGAATTTCAT CTGTCTTATATCCAACCTTCAACAAGCTGTTAGACTCTTTTGATGCATCTTTGAACTTAATGTGAACTTGAATGATTAGT GTAATGTTTGATCCATAATTCTCAGTCTTTTAAGTTTATTAATTTTTTATGAGTCTAGTGCAATGACAGGAAACATATAA AATATTTACAAGGGTAATAAGTTATTCAATGTGCTTGCAGAAAGAAGATGGCAACAAGTTTAGATATGGTGGATGGTGGT CTGTGTGGTGGACGGGAACATATAGCATGGTGCTCTCCAAGGCAGCATTCTTTCACAAAAAGTATTTCATTCTCTACACA AATGAGATGCCATCATCAATTAAAGAATATACAACAAAGAACAGGTTTTTATCTGACTAATTTACCGCCACTACCTTTCT TTTTATGAGGCTTCAATCTTTCAAACTTTGATTCAACTTTTTTGTTGTTTACTCAATAATTCAATTAATTTATCAGGAAT TGTGAAGATATCGCAATGTCTTTCCTTGTTGCAAATGCAACTGGTGCCCCGCCCATATGGGTTAAAGGTAATTTAACAAT TCCACTTGTCATATAACAATTGCATAGGAGTTGCATGAATTTTTCTTTTTTCTTTTCTGCTTGTTTAGCTGAGAAGTTCC TTAACTTCACTAGCTCAAAGTGTAAGACGCACTTCCATTTTGGGATTCATCACTTTACTGACATTTGTAAGATTGATTTG TGGTTGCAAAGAATGATACATGTATTTGTTTAGTACGCCAAAAGCAACATGAGAGCAAACATATTTTTAGTATATACAAA AAGGCATGCCATTAACAAAGAAGTTGCCACACTCTATATTTTCAGTGAAATTTGTGGAATCTTAAGTTGCTGATTTTGAA GTTCCATGCTAATGCTTTGATTTTATGTTGTCCTTTCATGGTAATAGAAATTGAAAATTGGTCTCGTTAATTGTATACAA CCATGTTGATATGTGCGACCCCTGCAAAGACATGTATATGTGAACTAAATGGATTTTGTTTCTGTTACAGGTAAAATATT TGAGATTGGATCAACTGGAATCAGTAGTTTGGGAGGTCACAGTGACAAAAGAACAGAGTGCGTCAACAGATTTGTTGACG TGTTTGGGCGGATGCCCTTAGAGTATACTTCAGTTAAGGCCGTCGACAGTCGAAATATCTGGTTTTGGTGACTGAAGATT TTGATTGTCTTTGCATTTCTATATTCCACGATGGTCAATTATGCTATGTTTGGATATCCATTGGTACTGGTGCTAACAGA GATAGCTTGCACTTCAAGAGAAAAAGTAAGCAGAACTCTTGTCTTACGTATTGAGAAGAAAGTCTGTTCATGTTAAATTC AACTGGTATCCAAACATTCACTTAGTAGCTAGTTGAGTTACTAAGTTCACGTTAGTTACAGAGCTGTGTGATATTGAATC TTACACATAATTCTTGCACTTTGGCTAGTTTAGCAAATTCCTCAGATTGATTTGTTGTATTACTAGTGACATTTGATGCT AGGCAGCATCCTGGGGCTGCTTTTGTCTCAAAGCTTTAAGAATTTGATTGTAAAATATTAAAGGATACTGCACACTTAGT CATGAAACTCCCATGCTTCCTTCATGAACTTTTGAGCTAATATTATTTCTGTGCATTGGATATACACATCTTCATATTTA AATACAGATATTAACTGTTCCATGAATCACATCTGCAGTGGCCAAACAAAAAAGAAGGTAACTGTAATTACTACTTCTTG GAAAAAATAAAAATAGATCAAGGATCACAACTTAAATGCAAGTGAACTGTAGATGGATCTATAGACAATTAATGTCATAG TTGTAAGTTGTCTAATTCTTCTACAGGTAAGCCACTACTACTATCTTGTCCACCATGGTTCCAAAGGAAACTGGCATACT TTGATAAATAAAAAGTGTTGCCAGGATCTACTTCCAATGCTTGCAGATATCTCAGTTCTGCTGCCCAAGCATCCTTTCTT ATTAGCAACAAGAAATCAGCATATCGACTGTATGCTTCTGCATCTGGTGATTCCACCAGCACTGAACGCCTGTAGTACTC TTCTGCCCTGTATCCATATCAAATACACAAAATTAGGGATCATAAATGAGCACCCGAAGAAACTTCAGAATTTCATTTAC ATGTTTCTCACCACACCCATGAAGACAACAATGTGATGTTTGGATATCTGTTGGCACCAGTGTAAACGGGCGGATGAAAC TCCGTTCACGTTGTACTTATCTGGTATCCAAACACACACTATGAAGTCTAGTATTGCCCTTGTTAACTTGCATCCAATCA AAATGAAACAATTGAGCTTGGCACAACAAATAAAAAACCTGATAACCCCCTTCATTGCATATAAAGAATAGCTAAAGAGT GCAGCATGATTTTAAAGCTAGCCAGATTTTATCGCAAAATTGGTTTTTGAGAACTCACCCATCAATGTCATGAAGAACTA GGAAGAGGAACTGAGCATAGTTAGACAGCAGAAGTGAATTGTGAGGTGTCAAGAGTATAAGTTTTTGGTAATAAGCCTCA GTTTTGAGATATTCCTCATATTGATCCCCTTCAAGCTTCACTGACACTGGGGCCACAGAAAATCTCATTGTCTCGTGGTC CAAAATCTCAGCCCCGCACTCTTTTTGCTGCAACATTGAAGCTTCCTTTACCATGGAACTCCATAACATTTCCTCCTCTT CAGTCAACTCCTCCTTCACACACTCATCTTGATCAACCTCAGAATCAACTTGAGGATGTTTTTGCTTACTCAAAGATAGA ACTGTGGTCATCATGGACATAGGAGTGGCATCCTTAACAGAGTTATTACTCACAGAGAGAACAGAGAAGTTTGCTAAAAG GACCATCACAGAGACCATGAGAGTTGGGGTCTCAGAGAAAACCTGCTGAAAGAGCCACACAAATGAAGCATCCATTTCTC TCTGCAGCTTCACCATAACACCTTGCGAGTCTTCACAGCACAACCTCTCCCTGGTTTCTAATGCATGATTCTGAAGCTGC TGGAGGATAAACAACATAGAGGAGAAGGTTTTCTTCAGAGAACATTGAATCAATTCAGTTTCACTTTCACCAACCTCTTT AACACCCGCCTGCAATTTCAGCTTCTCCTTGATCATCCTAATGGATAGAGGAATTCCCACACTTTTCACCTTCCTTTCAA AGCTCAGTCTCAGAATCTCATCTCTTTCTGGCCAGCTTGGTGGCTCTGGCTGGATTCCAAGAAGAGAAGGCTCGAGAATT TCATCAGGCTTCACTGTCCAAAATTTCTCCTTTTTGAATTTTCCATTGTAGTGGGCAACTCTGTTGTTGCCTTTTTCATC ATCATGAACCATGTTCATCACTTCTTCAGTGTGGAAATCATCAAAATGGGAAGAACAAGCATGCTTCACTCTCTGCACCC TCATGTTCCTGGAGCTAGAGAAGAAACTGTTCCTCCCAGTGGCATGTCTCAGTGGGAAAGGAGAAACTGCACGTGGCGTT GAATAAGGGGTTCTGAGGTGCCAACATTGAATATTGGGAGAGACTCTTGAGGCCATGTTTGATTCACCTAGTTCTTGCAG GAATCACAGAAATGATGAATTACTCTGAAAACAAATCTATCAACCAAAACACAATATTTATTAAATCTAAATACAAACTA ATCAAGATCATGGGAAGCTTGTTTGCACTATAAGAAAAAAGAAAGGTGGATACACCAAAAAGTTTCTCTGTTTCTGTATC AAGTTCAATAATACAATCAGATCAGTACAACAAAAAACACCAACTAAAAAGGGTAATGAAAAAGAGATTCTTTTATGGCT AAAAAAGTGATAAAAATCACAAATTTAAAAGGGGTGTGGCTGAAATGGGAAGTGGATATTTGGCTGAAATAGGAAATGAG TTATGAGTGTTGTGAACTTTTGATGAGCAGAAGAGAGGAGTCGATAACACGTGGGGCCTGATGAACGTGGCAATGAGATA AAGTGGGAAAGATATTTATGTAGTTTATGAGGTGTGC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0079800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGAGAGGGAGCAGCTGCTGGCTCAACCGTCGCGCGGAGCAGAGGTTCCGCCTGCTCGCGATCTCCACCGTTAAATC AGCTAAGATCAAGCTTCTACTCTTCTGTTGCGTCGCGTTGACGCTTCTCGCTTTCTTCACCAGCGCTTCCTCTTTCATCT TATGGAACAATCACACCCCTCCTCTGCCTCATTCCTCTGATTCCAGGAAAGGATATTCTATCGTAATGAACACGTGGAAG AGATATGATCTCCTAAAGCAGTCAATCAAGCACTATTCATCATGCCCTCGTCTTGAATCGGTACATATTGTGTGGAGTGA GCCCGATCCTCCTTCAGATGCTCTTTTAAAATTTCTGCACCATGTTGTGAAGTACAAGTCTAAAGATGGGCGACAAGTGA AATTGAGGTTTGATATCAACAAGGAAGACAGTTTGAACAATAGATTTAAAGAAATTAAGGATTTGGAGACAGATGCAGTC TTTTCCATTGATGATGATGTCATATTTCCTTGCTCTTCAGTGGAATTTGCATTTGATGTTTGGCAAAGTGCACCTGATAC AATGGTGGGGTTCGTGCCTCGGGTCCATTGGGAGGATCCATTGAAAGAAGATGGCAACAAGTTTAGATATGGTGGATGGT GGTCTGTGTGGTGGACGGGAACATATAGCATGGTGCTCTCCAAGGCAGCATTCTTTCACAAAAAGTATTTCATTCTCTAC ACAAATGAGATGCCATCATCAATTAAAGAATATACAACAAAGAACAGGAATTGTGAAGATATCGCAATGTCTTTCCTTGT TGCAAATGCAACTGGTGCCCCGCCCATATGGGTTAAAGGTAAAATATTTGAGATTGGATCAACTGGAATCAGTAGTTTGG GAGGTCACAGTGACAAAAGAACAGAGTGCGTCAACAGATTTGTTGACGTGTTTGGGCGGATGCCCTTAGAGTATACTTCA GTTAAGGCCGTCGACAGTCGAAATATCTGGTTTTGGTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0079800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMRGSSCWLNRRAEQRFRLLAISTVKSAKIKLLLFCCVALTLLAFFTSASSFILWNNHTPPLPHSSDSRKGYSIVMNTWK RYDLLKQSIKHYSSCPRLESVHIVWSEPDPPSDALLKFLHHVVKYKSKDGRQVKLRFDINKEDSLNNRFKEIKDLETDAV FSIDDDVIFPCSSVEFAFDVWQSAPDTMVGFVPRVHWEDPLKEDGNKFRYGGWWSVWWTGTYSMVLSKAAFFHKKYFILY TNEMPSSIKEYTTKNRNCEDIAMSFLVANATGAPPIWVKGKIFEIGSTGISSLGGHSDKRTECVNRFVDVFGRMPLEYTS VKAVDSRNIWFW
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
SIGNAL_PEPTIDE
1 51 51 - –
Phobius
SIGNAL_PEPTIDE_N_REGION
1 31 31 - –
PANTHER
PTHR11062:SF252
20 329 310 1.6E-120 –
PANTHER
PTHR11062
20 329 310 1.6E-120
IPR004263
TMHMM
TMhelix
32 54 23 - –
Phobius
SIGNAL_PEPTIDE_H_REGION
32 46 15 - –
Phobius
SIGNAL_PEPTIDE_C_REGION
47 51 5 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
52 332 281 - –
Gene3D
G3DSA:3.90.550.10
67 328 262 4.7E-92
IPR029044
SUPERFAMILY
SSF53448
70 322 253 1.46E-20
IPR029044
Pfam
PF09258
72 323 252 1.6E-80
IPR015338

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006486
Biological process Protein glycosylation A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
Subterm of
Part of
GO:0016021
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Subterm of
GO:0016757
Molecular function Transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0079800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…