Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0085900 |
| Transcript ID | LotjaGi1g1v0085900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp|Q0WSN2|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr|K7KAN7|K7KAN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0085900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:12434842..12439100) extracted from Lotus japonicus Gifu genome v1.2.
ATCGATTTTGTAAAATTAAGAATGACCCCATGAAGCTCTTATTAAACTTCCATGTTTTTTCTGCTGATTTTACTTACTGG GTATTCTCAAAGTTTCAAAATTTACTTTCCATATGTTTCCAAAAAATTATCTACCTAGACCATGTTATTTCTGGTTTGGC TTGATCCTTGAACTTTGTTCATATTACTATGATTAAGTGGTTCTAAACTTCTGACATAACTGATTGAATCATGAACTTTT TTGTGGCAAGCAGGGGATTTTTCTCACTCAGAGAGAAAGTCTGGTTTCATGAAATGGCTTAGTAAGCTTTTCAAAGGTGG GTCCAATAGAGCAAGGGGTGGTCGTCGTCTGCATGAGCCTGCCGAGGAAAACATAGTTTGGCGTGCTCCATCTAGAGCCT TGGTAAATAGCAGCACTGGCTTTCAGTTTTCTTCAATGATATGATATCTATTGTTCTTGACCTTGTTTATGATTAAAGTG AGAAATGCAAATAGTTAGTGTGTATGGTTCATCATTGTGGAACCTCATCATCAATTTTGATTTTTAAAATCAATTTCGAA CGACAATATGATGCTTGGGAGTCAATTAGGATAATCGATTTCAGCCCCAAAATCAATTCTGCTAGAAGCTAGAGAGAGTA GCTTTTGCTTTGAACATAATCAATTGTGAGATTTTACAACTGAGTTTCACAATATTATTCTATAAAAATCATTTTTTTTC ATAAATGTATCCAAACACACACCACTTCATTTTCAACTCATTTATATTCACTTTTACTATAATCAAATTTACCAAGATAA ATTTTATCCAAACCAAAATCAATTGTGCCAACGTTGATCTAAACACACACTTGGATAATGCAGTATATTATTGTCTTATT TGGTTGATTAGATAACCTCTGATCTCATCAACCTGAAGCAAGACTTTGTATTTAGACAAAGCATCCCAAAGCACTTTCTG AATTATACATATTATTTCTTCCTTTCCATAGATTTGGATTCACACTGGTAACTTTACATTTTGCATTCCAATGATGCTCT GTGGCTTCTTAGAACATCTAAACGGCTTCTTCTCTATCTGCCAATTCATTAATTCTTACTTAGTTCCTTCAATCTCAGTT TACTGGCTATCACAATGAGGGGGAACAGAACAAATTCCTCCATTTCATGATTTCAATTTAAAAATAAAATAACTTGAGAG GTGGGAAATCAATAGTATAAATCTTGGACAAGAAAGTATGCTTCATGAAGCCTTTATGATTGAGGATATTATATGTGGAA TAATACTCTTGAAGTAATTAGGATGATCGTGCTAGAGCTCCGAAGGAGAACGAGGATCTAGGCCATGCAATGGCACTTTC TTCAGCAGAAGATTTGAAGAGACCAAATGGTAAGTGCTTAATTTTCAAAAAGGTGCTTTCTCTCTAGCTATCCTGATATT TTCTGATCAAAGATTAAACATTTATTTCCATTAGCCCATCAAGGATATAATTGGGGGGCAGACATCGATGAAGGTTATAC AAAAGATCCCTTGAACTCATATGCACAACCTCCATATGCTCCAGCACCATACTATCCCAATGAATATAGGTAAAATCTTT GCTCTTCAAAATTTTGTACTAATATGCAGGTGCCAAACATCAAGTGTTTCCAATTTGGTCACTGGCAAGGCTTGTTTTAG ATCTTCTGACATAATGTGTGTATTATAACATGTTTGGATCAACTTATTTTTTCTCACAATCAATTCTGTCACCCAGAAGC TACTGACCTGGGCTTCTCCCCAGAATTTATTCTGGCTTTTGAGTCAATTGTTAAAGGATTTCCAAACATGCTATTAATGT CTCTCTAGTCTCTACATTATGATGGTCCTGCTGAATCTTTTTTTTTTTTGGTTTCAATGAATCAAACTGCTATAGGAATC AGAATTTGTTCTTTCTAGATCTTTGTAAAACAAATTTAAGAAGTGGAAAAGATCTTGAAGCATTTAAATTCATGCAGCTG CGATCTAGTTTTTTTCTTCTTATCTAAACACCTAAGTAATAGGAATAGCAGAGTTTGATACCATTTACAACTAATAATGT GTATTTTGCCATTGAACAGAAGAATATGTGGAGGTTGCAACCAGGAGATAATCTATGGGAATTGTTTGGGCTGCATGGAT ACTTACTTTCATCCAGACTGCTTCCGCTGTCACGCTTGTCGTTACCCCATTACCGAGCGTGAGGTAGTTTGACCCTCTTG GATATTTATTGCATGTTTGGACCAGCTTTTCTTTCTTCCATAATCAATTCTGAACAGAAGCTACTCACATAAGATTCTCC TCTGAATTGATTCCTACAAATTCATGTTATTCAGACTTTTGAAGATATTCTTGGTGTTACAAAAGTATTGATTTTGACAA TTTTTTTCTCTGTCGATCCAAGTTTTCACTGTCAGGGAAGCATCCATATCACAAGTCCTGTTTTCAAGAGCTGACCCACC CAAAATGCGAAGTTTGCTTCCAATTTGTAAGACTAGTCTGCCTTTGCTTATTTAAATTATTCTGCATTAAGATCATGTCT TGTGTACCAATTTCCTGTCATCCTCATACTTAATGCAGAGCTACATTAACACTTGTTAAATATTTATTTACTTTCAGATT CCTATAAATGCTGCTGGTTTGATTGAGTATAGGTGCCACCCATTTTGGTCCCAAAAGTATTGTCCATCTCATGAATATGA TAACACATCTCGCTGCTGCAGCTGCGAAAGATTGGAGGTACTGATTTAACTGATACTCCACACTGCTCAATAATTTGTAC TTCACGAAAAAAAGATAAAGAATAGCTTTTATCTGTTGTTTTTTATTACCTTGAAGCCTCGGAACATAAAATACTATAGG CTGGAAGATGGAAGGAGTTTGTGCTTAGAGTGCATGGAATCTGCTATAATGGACACTGGTGATTGTCAGCCTCTCTACCA TTCTATCAGAGATTATTATGAAGGAATGAATATGAGAATAGATCAACAAGTTCCCATGCTTCTCGTTGAGAGAGAAGCAC TTAATGATGCTATTGTTGGAGAGAAGAATGTAATGAAAATTTCATTCCTTGGTTTTATTCAAGTAATTTAATAGCATGTT TGGATCAATTCTGTCACCCAGAAGCTACTCATAGAAGCTTCTCTACAGAATTGATTCTGACTTTAGAATCAATTGTAGAG ATTTCCAAACATGCACTTAATCCAGTTCCCCTTACTCTTTATGGTTTTTTCCAGGGTTTCCATCACTTGCCAGAAACAAG GGGCTTATGTCTTTCAGAAGAGCAAACTGTCACCAGTGTATGATATTAGAACTATTTAATTTTTGTTTGCTTGGATCATG AAGCATGTTGCAGATTGTTTGTCAGAAAATTACATACTACTTCCTGATTTCATGTTGTTTCAGATACATAGAAGGCCAAG AATTGGAGGCCACCGACTAATAGGGATGAGAACTCAACCTCAAAAGCTGATTAGAAAATGTGAAGTTACAGCAATTCTTG TTCTATATGGTCTTCCCAGGTAAGTTATGGACCATGGAAACTTTGTTCTCATAGCAGACTATGCCACTTTCTTCCTATTG ATGATGTCCAAACTTCATAAGCTCTCATTTTTTCATGAGATGCAGGTTACTCACTGGCGCTATACTTGCCCACGAGTTAA TGCATGCCTGGTTACGCCTTAAAGGTATATACATTCCAATCAAAATCTTCTCACGTTGAAATTTCAGTGTCATGTTAAAA TTTTGTGTCTATCTATCTCTTATATATACAAGAGAGAATTCTGAGTCCCGAGTGATATACATTCATATTTTGATGCTTTA TCCTAGTATTCAACTTCTTGGTATACATGGCTTTTCCTCTAATTCATGTTTGAACTAAACAGGTTACCGCAACCTTAATC CTGAAGTAGAGGAAGGGATCTGTCAGGTTCTTTCATATATGTGGCTTGAGTCAGAAGTAATGCCAAATTTTCGAAGCATG CCATCAACATCCACAGGTGCTTCTTCCTCCTCCACCTCGTCCTCATCAAAGAAAGGTGCGGTGTCTCAGGTTGAAAATAA ACTGGGTGAATTTTTCAAGAATCAGATTGCCAATGATTCTTCCCCAGCTTATGGTGGTGGCTTCAGAGCTGCAAATGAAG CTGTCAACAAATATGGTTTACGTTGTACTCTTGATCATATTCGTTTGACCGGTTTTTTCCCTTTGTAATAAGAACACACG TGCTCTAAGTGTGGATTGA
CDS sequence (LotjaGi1g1v0085900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTCTTATTAAACTTCCATGTTTTTTCTGCTGATTTTACTTACTGGGTATTCTCAAAGTTTCAAAATTTACTTTC CATATGTTTCCAAAAAATTATCTACCTAGACCATGTTATTTCTGGGGATTTTTCTCACTCAGAGAGAAAGTCTGGTTTCA TGAAATGGCTTAGTAAGCTTTTCAAAGGTGGGTCCAATAGAGCAAGGGGTGGTCGTCGTCTGCATGAGCCTGCCGAGGAA AACATAGTTTGGCGTGCTCCATCTAGAGCCTTGGATGATCGTGCTAGAGCTCCGAAGGAGAACGAGGATCTAGGCCATGC AATGGCACTTTCTTCAGCAGAAGATTTGAAGAGACCAAATGGATATAATTGGGGGGCAGACATCGATGAAGGTTATACAA AAGATCCCTTGAACTCATATGCACAACCTCCATATGCTCCAGCACCATACTATCCCAATGAATATAGAAGAATATGTGGA GGTTGCAACCAGGAGATAATCTATGGGAATTGTTTGGGCTGCATGGATACTTACTTTCATCCAGACTGCTTCCGCTGTCA CGCTTGTCGTTACCCCATTACCGAGCGTGAGTTTTCACTGTCAGGGAAGCATCCATATCACAAGTCCTGTTTTCAAGAGC TGACCCACCCAAAATGCGAAGTTTGCTTCCAATTTATTCCTATAAATGCTGCTGGTTTGATTGAGTATAGGTGCCACCCA TTTTGGTCCCAAAAGTATTGTCCATCTCATGAATATGATAACACATCTCGCTGCTGCAGCTGCGAAAGATTGGAGCCTCG GAACATAAAATACTATAGGCTGGAAGATGGAAGGAGTTTGTGCTTAGAGTGCATGGAATCTGCTATAATGGACACTGGTG ATTGTCAGCCTCTCTACCATTCTATCAGAGATTATTATGAAGGAATGAATATGAGAATAGATCAACAAGTTCCCATGCTT CTCGTTGAGAGAGAAGCACTTAATGATGCTATTGTTGGAGAGAAGAATGGTTTCCATCACTTGCCAGAAACAAGGGGCTT ATGTCTTTCAGAAGAGCAAACTGTCACCAGTATACATAGAAGGCCAAGAATTGGAGGCCACCGACTAATAGGGATGAGAA CTCAACCTCAAAAGCTGATTAGAAAATGTGAAGTTACAGCAATTCTTGTTCTATATGGTCTTCCCAGGTTACTCACTGGC GCTATACTTGCCCACGAGTTAATGCATGCCTGGTTACGCCTTAAAGGTTACCGCAACCTTAATCCTGAAGTAGAGGAAGG GATCTGTCAGGTTCTTTCATATATGTGGCTTGAGTCAGAAGTAATGCCAAATTTTCGAAGCATGCCATCAACATCCACAG GTGCTTCTTCCTCCTCCACCTCGTCCTCATCAAAGAAAGGTGCGGTGTCTCAGGTTGAAAATAAACTGGGTGAATTTTTC AAGAATCAGATTGCCAATGATTCTTCCCCAGCTTATGGTGGTGGCTTCAGAGCTGCAAATGAAGCTGTCAACAAATATGG TTTACGTTGTACTCTTGATCATATTCGTTTGACCGGTTTTTTCCCTTTGTAA
Protein sequence (LotjaGi1g1v0085900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLLLNFHVFSADFTYWVFSKFQNLLSICFQKIIYLDHVISGDFSHSERKSGFMKWLSKLFKGGSNRARGGRRLHEPAEE NIVWRAPSRALDDRARAPKENEDLGHAMALSSAEDLKRPNGYNWGADIDEGYTKDPLNSYAQPPYAPAPYYPNEYRRICG GCNQEIIYGNCLGCMDTYFHPDCFRCHACRYPITEREFSLSGKHPYHKSCFQELTHPKCEVCFQFIPINAAGLIEYRCHP FWSQKYCPSHEYDNTSRCCSCERLEPRNIKYYRLEDGRSLCLECMESAIMDTGDCQPLYHSIRDYYEGMNMRIDQQVPML LVEREALNDAIVGEKNGFHHLPETRGLCLSEEQTVTSIHRRPRIGGHRLIGMRTQPQKLIRKCEVTAILVLYGLPRLLTG AILAHELMHAWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPNFRSMPSTSTGASSSSTSSSSKKGAVSQVENKLGEFF KNQIANDSSPAYGGGFRAANEAVNKYGLRCTLDHIRLTGFFPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 43 | 523 | 481 | 1.3E-284 | – | |
| PANTHER | 43 | 523 | 481 | 1.3E-284 | – | |
| Gene3D | 146 | 289 | 144 | 1.1E-14 | – | |
| SUPERFAMILY | 154 | 184 | 31 | 3.38E-5 | – | |
| ProSiteProfiles | 157 | 217 | 61 | 10.91 | ||
| SMART | 158 | 210 | 53 | 1.5E-6 | ||
| CDD | 159 | 211 | 53 | 8.00653E-25 | – | |
| Pfam | 159 | 213 | 55 | 8.0E-8 | ||
| ProSitePatterns | 159 | 193 | 35 | - | ||
| Pfam | 308 | 518 | 211 | 1.2E-98 | ||
| MobiDBLite | 447 | 467 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0085900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…