Domain Predictions — View

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cd09396

Source: CDD

Description

LIM_DA1

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 21

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0329179.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LIM and UIM domain-containing [Medicago truncatula] gi\|357461021\|ref\|XP_003600792.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.10.110.10 IPR001781 IPR022087 NON_CYTOPLASMIC_DOMAIN PF00412 PF12315 PS00478 PS50023 PTHR24209 PTHR24209:SF7 SM00132 SSF57716 TRANSMEMBRANE cd09396 mobidb-lite	16
Lj2g3v1828370.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein DA1-related 1-like isoform 1 [Glycine max] gi\|356496814\|ref\|XP_003517260.1\|	Domains Coil G3DSA:2.10.110.10 IPR001781 IPR003903 IPR022087 PF00412 PF12315 PS00478 PS50023 PS50330 PTHR24209 PTHR24209:SF10 SM00132 SM00726 SSF57716 cd09396 mobidb-lite	17
Lj2g3v2661480.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	LIM and UIM domain-containing [Medicago truncatula] gi\|357492437\|ref\|XP_003616507.1\|	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF00412 PF12315 PS00478 PS50023 PTHR24209 PTHR24209:SF7 SM00132 SSF57716 cd09396 mobidb-lite	13
Lj4g3v0911400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein DA1-related 1-like isoform X1 [Cicer arietinum] gi\|502153131\|ref\|XP_004509228.1\|	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF12315 PS50023 PTHR24209 PTHR24209:SF13 SSF57716 cd09396 mobidb-lite	10
Lj4g3v0914500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein DA1-related 1-like isoform X1 [Cicer arietinum] gi\|502153131\|ref\|XP_004509228.1\|	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF12315 PS50023 PTHR24209 PTHR24209:SF13 cd09396 mobidb-lite	9
Lj5g3v0083000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein DA1-like isoform X1 [Cicer arietinum] gi\|502125921\|ref\|XP_004499115.1\|	Domains Coil G3DSA:2.10.110.10 IPR001781 IPR003903 IPR022087 PF00412 PF02809 PF12315 PS00478 PS50023 PS50330 PTHR24209 PTHR24209:SF10 SM00132 SM00726 SSF57716 cd09396 mobidb-lite	18
LotjaGi1g1v0085900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp\|Q0WSN2\|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr\|V7B7H4\|V7B7H4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0085900	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF00412 PF12315 PS00478 PS50023 PTHR24209 PTHR24209:SF27 SM00132 SSF57716 cd09396 mobidb-lite	13
LotjaGi1g1v0085900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp\|Q0WSN2\|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr\|K7KAN7\|K7KAN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0085900	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF00412 PF12315 PS00478 PS50023 PTHR24209 PTHR24209:SF27 SM00132 SSF57716 cd09396 mobidb-lite	13
LotjaGi1g1v0085900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp\|Q0WSN2\|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr\|A0A0S3RKQ0\|A0A0S3RKQ0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0085900	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF00412 PF12315 PS00478 PS50023 PTHR24209 PTHR24209:SF27 SM00132 SSF57716 cd09396 mobidb-lite	13
LotjaGi1g1v0085900.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp\|Q0WSN2\|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr\|A0A0S3RKQ0\|A0A0S3RKQ0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0085900	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF00412 PF12315 PS00478 PS50023 PTHR24209 PTHR24209:SF27 SM00132 SSF57716 cd09396 mobidb-lite	13
LotjaGi2g1v0395000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT4G36860.1 LIM domain-containing protein; Swiss-Prot: sp\|Q8W4F0\|DAR1_ARATH Protein DA1-related 1; TrEMBL-Plants: tr\|A0A0B2RSU7\|A0A0B2RSU7_GLYSO DA-related 1 protein 1; Found in the gene: LotjaGi2g1v0395000	Domains Coil G3DSA:2.10.110.10 IPR001781 IPR003903 IPR022087 PF00412 PF12315 PS00478 PS50023 PS50330 PTHR24209 PTHR24209:SF30 SM00132 SM00726 SSF57716 cd09396 mobidb-lite	17
LotjaGi2g1v0395000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT4G36860.1 LIM domain-containing protein; Swiss-Prot: sp\|Q8W4F0\|DAR1_ARATH Protein DA1-related 1; TrEMBL-Plants: tr\|A0A0G2UMG5\|A0A0G2UMG5_GLYSO DA-related 1 protein 4; Found in the gene: LotjaGi2g1v0395000	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF12315 PS50023 PTHR24209 PTHR24209:SF30 cd09396 mobidb-lite	9
LotjaGi2g1v0395000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT4G36860.1 LIM domain-containing protein; Swiss-Prot: sp\|Q8W4F0\|DAR1_ARATH Protein DA1-related 1; TrEMBL-Plants: tr\|A0A0G2UMG5\|A0A0G2UMG5_GLYSO DA-related 1 protein 4; Found in the gene: LotjaGi2g1v0395000	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF12315 PS50023 PTHR24209 PTHR24209:SF30 cd09396 mobidb-lite	9
LotjaGi4g1v0114100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT4G36860.1 LIM domain-containing protein; Swiss-Prot: sp\|Q8W4F0\|DAR1_ARATH Protein DA1-related 1; TrEMBL-Plants: tr\|K7K6P3\|K7K6P3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0114100	Domains G3DSA:2.10.110.10 IPR001781 IPR003903 IPR022087 PF00412 PF12315 PS00478 PS50023 PS50330 PTHR24209 PTHR24209:SF30 SM00132 SM00726 SSF57716 cd08368 cd09396 mobidb-lite	17
LotjaGi5g1v0019700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT1G19270.1 DA1; Swiss-Prot: sp\|P0C7Q8\|DA1_ARATH Protein DA1; TrEMBL-Plants: tr\|A0A151RWT7\|A0A151RWT7_CAJCA LIM and UIM domain-containing family; Found in the gene: LotjaGi5g1v0019700	Domains Coil G3DSA:2.10.110.10 IPR001781 IPR003903 IPR022087 PF00412 PF12315 PS00478 PS50023 PS50330 PTHR24209 PTHR24209:SF29 SM00132 SM00726 SSF57716 cd09396	16
LotjaGi5g1v0019700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT1G19270.1 DA1; Swiss-Prot: sp\|P0C7Q8\|DA1_ARATH Protein DA1; TrEMBL-Plants: tr\|A0A0L9TTM7\|A0A0L9TTM7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0019700	Domains Coil G3DSA:2.10.110.10 IPR001781 IPR003903 IPR022087 PF00412 PF12315 PS00478 PS50023 PS50330 PTHR24209 PTHR24209:SF29 SM00132 SM00726 SSF57716 cd09396	16
LotjaGi5g1v0019700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT1G19270.1 DA1; Swiss-Prot: sp\|P0C7Q8\|DA1_ARATH Protein DA1; TrEMBL-Plants: tr\|A0A151RWT7\|A0A151RWT7_CAJCA LIM and UIM domain-containing family; Found in the gene: LotjaGi5g1v0019700	Domains Coil G3DSA:2.10.110.10 IPR001781 IPR003903 IPR022087 PF00412 PF12315 PS00478 PS50023 PS50330 PTHR24209 PTHR24209:SF29 SM00132 SM00726 SSF57716 cd09396	16
LotjaGi6g1v0066100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp\|Q0WSN2\|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr\|G7JA19\|G7JA19_MEDTR Zinc ion-binding protein; Found in the gene: LotjaGi6g1v0066100	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF00412 PF12315 PS00478 PS50023 PTHR24209 PTHR24209:SF27 SM00132 SSF57716 cd09396 mobidb-lite	13
LotjaGi6g1v0066100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp\|Q0WSN2\|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr\|G7JA19\|G7JA19_MEDTR Zinc ion-binding protein; Found in the gene: LotjaGi6g1v0066100	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF00412 PF12315 PS00478 PS50023 PTHR24209 PTHR24209:SF27 SM00132 SSF57716 cd09396 mobidb-lite	13
LotjaGi6g1v0066100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp\|Q0WSN2\|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr\|G7JA19\|G7JA19_MEDTR Zinc ion-binding protein; Found in the gene: LotjaGi6g1v0066100	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF00412 PF12315 PS00478 PS50023 PTHR24209 PTHR24209:SF27 SM00132 SSF57716 cd09396 mobidb-lite	13
LotjaGi6g1v0066100.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp\|Q0WSN2\|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr\|G7JA19\|G7JA19_MEDTR Zinc ion-binding protein; Found in the gene: LotjaGi6g1v0066100	Domains G3DSA:2.10.110.10 IPR001781 IPR022087 PF00412 PF12315 PS00478 PS50023 PTHR24209 PTHR24209:SF27 SM00132 SSF57716 cd09396 mobidb-lite	13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	4.76