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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0085900 |
| Transcript ID | LotjaGi1g1v0085900.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DA1-related 1; TAIR: AT2G39830.1 DA1-related protein 2; Swiss-Prot: sp|Q0WSN2|DAR2_ARATH Protein DA1-related 2; TrEMBL-Plants: tr|A0A0S3RKQ0|A0A0S3RKQ0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0085900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:12434873..12438851) extracted from Lotus japonicus Gifu genome v1.2.
GCAGGGGATTTTTCTCACTCAGAGAGAAAGTCTGGTTTCATGAAATGGCTTAGTAAGCTTTTCAAAGGTGGGTCCAATAG AGCAAGGGGTGGTCGTCGTCTGCATGAGCCTGCCGAGGAAAACATAGTTTGGCGTGCTCCATCTAGAGCCTTGGTAAATA GCAGCACTGGCTTTCAGTTTTCTTCAATGATATGATATCTATTGTTCTTGACCTTGTTTATGATTAAAGTGAGAAATGCA AATAGTTAGTGTGTATGGTTCATCATTGTGGAACCTCATCATCAATTTTGATTTTTAAAATCAATTTCGAACGACAATAT GATGCTTGGGAGTCAATTAGGATAATCGATTTCAGCCCCAAAATCAATTCTGCTAGAAGCTAGAGAGAGTAGCTTTTGCT TTGAACATAATCAATTGTGAGATTTTACAACTGAGTTTCACAATATTATTCTATAAAAATCATTTTTTTTCATAAATGTA TCCAAACACACACCACTTCATTTTCAACTCATTTATATTCACTTTTACTATAATCAAATTTACCAAGATAAATTTTATCC AAACCAAAATCAATTGTGCCAACGTTGATCTAAACACACACTTGGATAATGCAGTATATTATTGTCTTATTTGGTTGATT AGATAACCTCTGATCTCATCAACCTGAAGCAAGACTTTGTATTTAGACAAAGCATCCCAAAGCACTTTCTGAATTATACA TATTATTTCTTCCTTTCCATAGATTTGGATTCACACTGGTAACTTTACATTTTGCATTCCAATGATGCTCTGTGGCTTCT TAGAACATCTAAACGGCTTCTTCTCTATCTGCCAATTCATTAATTCTTACTTAGTTCCTTCAATCTCAGTTTACTGGCTA TCACAATGAGGGGGAACAGAACAAATTCCTCCATTTCATGATTTCAATTTAAAAATAAAATAACTTGAGAGGTGGGAAAT CAATAGTATAAATCTTGGACAAGAAAGTATGCTTCATGAAGCCTTTATGATTGAGGATATTATATGTGGAATAATACTCT TGAAGTAATTAGGATGATCGTGCTAGAGCTCCGAAGGAGAACGAGGATCTAGGCCATGCAATGGCACTTTCTTCAGCAGA AGATTTGAAGAGACCAAATGGTAAGTGCTTAATTTTCAAAAAGGTGCTTTCTCTCTAGCTATCCTGATATTTTCTGATCA AAGATTAAACATTTATTTCCATTAGCCCATCAAGGATATAATTGGGGGGCAGACATCGATGAAGGTTATACAAAAGATCC CTTGAACTCATATGCACAACCTCCATATGCTCCAGCACCATACTATCCCAATGAATATAGGTAAAATCTTTGCTCTTCAA AATTTTGTACTAATATGCAGGTGCCAAACATCAAGTGTTTCCAATTTGGTCACTGGCAAGGCTTGTTTTAGATCTTCTGA CATAATGTGTGTATTATAACATGTTTGGATCAACTTATTTTTTCTCACAATCAATTCTGTCACCCAGAAGCTACTGACCT GGGCTTCTCCCCAGAATTTATTCTGGCTTTTGAGTCAATTGTTAAAGGATTTCCAAACATGCTATTAATGTCTCTCTAGT CTCTACATTATGATGGTCCTGCTGAATCTTTTTTTTTTTTGGTTTCAATGAATCAAACTGCTATAGGAATCAGAATTTGT TCTTTCTAGATCTTTGTAAAACAAATTTAAGAAGTGGAAAAGATCTTGAAGCATTTAAATTCATGCAGCTGCGATCTAGT TTTTTTCTTCTTATCTAAACACCTAAGTAATAGGAATAGCAGAGTTTGATACCATTTACAACTAATAATGTGTATTTTGC CATTGAACAGAAGAATATGTGGAGGTTGCAACCAGGAGATAATCTATGGGAATTGTTTGGGCTGCATGGATACTTACTTT CATCCAGACTGCTTCCGCTGTCACGCTTGTCGTTACCCCATTACCGAGCGTGAGGTAGTTTGACCCTCTTGGATATTTAT TGCATGTTTGGACCAGCTTTTCTTTCTTCCATAATCAATTCTGAACAGAAGCTACTCACATAAGATTCTCCTCTGAATTG ATTCCTACAAATTCATGTTATTCAGACTTTTGAAGATATTCTTGGTGTTACAAAAGTATTGATTTTGACAATTTTTTTCT CTGTCGATCCAAGTTTTCACTGTCAGGGAAGCATCCATATCACAAGTCCTGTTTTCAAGAGCTGACCCACCCAAAATGCG AAGTTTGCTTCCAATTTGTAAGACTAGTCTGCCTTTGCTTATTTAAATTATTCTGCATTAAGATCATGTCTTGTGTACCA ATTTCCTGTCATCCTCATACTTAATGCAGAGCTACATTAACACTTGTTAAATATTTATTTACTTTCAGATTCCTATAAAT GCTGCTGGTTTGATTGAGTATAGGTGCCACCCATTTTGGTCCCAAAAGTATTGTCCATCTCATGAATATGATAACACATC TCGCTGCTGCAGCTGCGAAAGATTGGAGGTACTGATTTAACTGATACTCCACACTGCTCAATAATTTGTACTTCACGAAA AAAAGATAAAGAATAGCTTTTATCTGTTGTTTTTTATTACCTTGAAGCCTCGGAACATAAAATACTATAGGCTGGAAGAT GGAAGGAGTTTGTGCTTAGAGTGCATGGAATCTGCTATAATGGACACTGGTGATTGTCAGCCTCTCTACCATTCTATCAG AGATTATTATGAAGGAATGAATATGAGAATAGATCAACAAGTTCCCATGCTTCTCGTTGAGAGAGAAGCACTTAATGATG CTATTGTTGGAGAGAAGAATGTAATGAAAATTTCATTCCTTGGTTTTATTCAAGTAATTTAATAGCATGTTTGGATCAAT TCTGTCACCCAGAAGCTACTCATAGAAGCTTCTCTACAGAATTGATTCTGACTTTAGAATCAATTGTAGAGATTTCCAAA CATGCACTTAATCCAGTTCCCCTTACTCTTTATGGTTTTTTCCAGGGTTTCCATCACTTGCCAGAAACAAGGGGCTTATG TCTTTCAGAAGAGCAAACTGTCACCAGTGTATGATATTAGAACTATTTAATTTTTGTTTGCTTGGATCATGAAGCATGTT GCAGATTGTTTGTCAGAAAATTACATACTACTTCCTGATTTCATGTTGTTTCAGATACATAGAAGGCCAAGAATTGGAGG CCACCGACTAATAGGGATGAGAACTCAACCTCAAAAGCTGATTAGAAAATGTGAAGTTACAGCAATTCTTGTTCTATATG GTCTTCCCAGGTAAGTTATGGACCATGGAAACTTTGTTCTCATAGCAGACTATGCCACTTTCTTCCTATTGATGATGTCC AAACTTCATAAGCTCTCATTTTTTCATGAGATGCAGGTTACTCACTGGCGCTATACTTGCCCACGAGTTAATGCATGCCT GGTTACGCCTTAAAGGTATATACATTCCAATCAAAATCTTCTCACGTTGAAATTTCAGTGTCATGTTAAAATTTTGTGTC TATCTATCTCTTATATATACAAGAGAGAATTCTGAGTCCCGAGTGATATACATTCATATTTTGATGCTTTATCCTAGTAT TCAACTTCTTGGTATACATGGCTTTTCCTCTAATTCATGTTTGAACTAAACAGGTTACCGCAACCTTAATCCTGAAGTAG AGGAAGGGATCTGTCAGGTTCTTTCATATATGTGGCTTGAGTCAGAAGTAATGCCAAATTTTCGAAGCATGCCATCAACA TCCACAGGTGCTTCTTCCTCCTCCACCTCGTCCTCATCAAAGAAAGGTGCGGTGTCTCAGGTTGAAAATAAACTGGGTGA ATTTTTCAAGAATCAGATTGCCAATGATTCTTCCCCAGCTTATGGTGGTGGCTTCAGAGCTGCAAATGAAGCTGTCAACA AATATGGTTTACGTTGTACTCTTGATCATATTCGTTTGACCGGTTTTTTCCCTTTGTAA
CDS sequence (LotjaGi1g1v0085900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATGGCTTAGTAAGCTTTTCAAAGGTGGGTCCAATAGAGCAAGGGGTGGTCGTCGTCTGCATGAGCCTGCCGAGGA AAACATAGTTTGGCGTGCTCCATCTAGAGCCTTGGATGATCGTGCTAGAGCTCCGAAGGAGAACGAGGATCTAGGCCATG CAATGGCACTTTCTTCAGCAGAAGATTTGAAGAGACCAAATGCCCATCAAGGATATAATTGGGGGGCAGACATCGATGAA GGTTATACAAAAGATCCCTTGAACTCATATGCACAACCTCCATATGCTCCAGCACCATACTATCCCAATGAATATAGAAG AATATGTGGAGGTTGCAACCAGGAGATAATCTATGGGAATTGTTTGGGCTGCATGGATACTTACTTTCATCCAGACTGCT TCCGCTGTCACGCTTGTCGTTACCCCATTACCGAGCGTGAGTTTTCACTGTCAGGGAAGCATCCATATCACAAGTCCTGT TTTCAAGAGCTGACCCACCCAAAATGCGAAGTTTGCTTCCAATTTATTCCTATAAATGCTGCTGGTTTGATTGAGTATAG GTGCCACCCATTTTGGTCCCAAAAGTATTGTCCATCTCATGAATATGATAACACATCTCGCTGCTGCAGCTGCGAAAGAT TGGAGCCTCGGAACATAAAATACTATAGGCTGGAAGATGGAAGGAGTTTGTGCTTAGAGTGCATGGAATCTGCTATAATG GACACTGGTGATTGTCAGCCTCTCTACCATTCTATCAGAGATTATTATGAAGGAATGAATATGAGAATAGATCAACAAGT TCCCATGCTTCTCGTTGAGAGAGAAGCACTTAATGATGCTATTGTTGGAGAGAAGAATGGTTTCCATCACTTGCCAGAAA CAAGGGGCTTATGTCTTTCAGAAGAGCAAACTGTCACCAGTATACATAGAAGGCCAAGAATTGGAGGCCACCGACTAATA GGGATGAGAACTCAACCTCAAAAGCTGATTAGAAAATGTGAAGTTACAGCAATTCTTGTTCTATATGGTCTTCCCAGGTT ACTCACTGGCGCTATACTTGCCCACGAGTTAATGCATGCCTGGTTACGCCTTAAAGGTTACCGCAACCTTAATCCTGAAG TAGAGGAAGGGATCTGTCAGGTTCTTTCATATATGTGGCTTGAGTCAGAAGTAATGCCAAATTTTCGAAGCATGCCATCA ACATCCACAGGTGCTTCTTCCTCCTCCACCTCGTCCTCATCAAAGAAAGGTGCGGTGTCTCAGGTTGAAAATAAACTGGG TGAATTTTTCAAGAATCAGATTGCCAATGATTCTTCCCCAGCTTATGGTGGTGGCTTCAGAGCTGCAAATGAAGCTGTCA ACAAATATGGTTTACGTTGTACTCTTGATCATATTCGTTTGACCGGTTTTTTCCCTTTGTAA
Protein sequence (LotjaGi1g1v0085900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKWLSKLFKGGSNRARGGRRLHEPAEENIVWRAPSRALDDRARAPKENEDLGHAMALSSAEDLKRPNAHQGYNWGADIDE GYTKDPLNSYAQPPYAPAPYYPNEYRRICGGCNQEIIYGNCLGCMDTYFHPDCFRCHACRYPITEREFSLSGKHPYHKSC FQELTHPKCEVCFQFIPINAAGLIEYRCHPFWSQKYCPSHEYDNTSRCCSCERLEPRNIKYYRLEDGRSLCLECMESAIM DTGDCQPLYHSIRDYYEGMNMRIDQQVPMLLVEREALNDAIVGEKNGFHHLPETRGLCLSEEQTVTSIHRRPRIGGHRLI GMRTQPQKLIRKCEVTAILVLYGLPRLLTGAILAHELMHAWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPNFRSMPS TSTGASSSSTSSSSKKGAVSQVENKLGEFFKNQIANDSSPAYGGGFRAANEAVNKYGLRCTLDHIRLTGFFPL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 473 | 473 | 2.8E-281 | – | |
| PANTHER | 1 | 473 | 473 | 2.8E-281 | – | |
| Gene3D | 96 | 239 | 144 | 9.3E-15 | – | |
| SUPERFAMILY | 104 | 134 | 31 | 3.17E-5 | – | |
| ProSiteProfiles | 107 | 167 | 61 | 10.91 | ||
| SMART | 108 | 160 | 53 | 1.5E-6 | ||
| ProSitePatterns | 109 | 143 | 35 | - | ||
| Pfam | 109 | 163 | 55 | 6.8E-8 | ||
| CDD | 109 | 161 | 53 | 1.21581E-24 | – | |
| Pfam | 258 | 468 | 211 | 9.6E-99 | ||
| MobiDBLite | 397 | 417 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0085900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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