Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0086200 |
| Transcript ID | LotjaGi1g1v0086200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transducin/WD40 repeat protein; TAIR: AT5G05970.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|B3H5K9|NEDD1_ARATH Protein NEDD1; TrEMBL-Plants: tr|A0A0L9UWR8|A0A0L9UWR8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:12482011..12490016) extracted from Lotus japonicus Gifu genome v1.2.
CTGAAAATGTAAAAATCAAGATTGTTGAGATGATATAATATAAAGTTCCCACCCAGATTTGGATCATATAATATAAAACG CGCCCACTTCATTTCCATTTCATCTTTCAAATTTTCCAACTCTCATCTTCTCTCGTTCTCTTCTCTGTGATTTCGTTGAA CTAGGGTTTCCAATTTCCAATTCCCATTCCCAAATCGCGAATGTCACAGCCCATTTCCTCGCAAATCTCCTCCTAGATCA CTGCTGCTTCCGGAGGATCAATCAATGGCGTTGTTGGCAGCAAGCGGCGGCGACACCGTTAAGCTATTCGACGCCTCCGT CAAGCCCGGCGATCCTTGTACTCTCAGCTTCACCCCTTCTCCTGGTTCTCAAGTCCACTCAGTGAAGTGGAATCACACCA GTGAGTTCAATTTTTTTTTTGCTTTCTAGGGTTTGCATTTTCTAATTCTGATGGGTTCTGGTTATGTTGGATTCGTTTGT GAAATTGGATGTTGCATTGTTTTTTCTGCTGCTGAATTTGGTTTCTTCGCAGATTTGGTTGTGGCCAGTGCTGGGGATGA CAAGAGGATCTCCTTGTGGCGTAAGAATGGGCACAGCATGGGGACCATTCCGCTCGCCGGTACTGACAGCGGTGACAACA TTGAGGTAGTTTTTGCTTTTGGATGTGGAATATGTATTGTAGTGTATTGTACAGAAATTTAAATGTTTCATTTTAGTGTT GCTGAAACATTGTAAATTTTGCACTTATTTGAAGTGGTTTTTATAAGAATTTAGGACTAATTAAATGCGTTGTCGTTATC AAAATAAACTTGCTTGCGAGATCCTTGGTGTAATTTTTATAGTGTTTTTTTAAGAATTGAATTAATAAAAAAAACACTTT GAAGAATTTCCTTTGGCTATCTTGCCATAGTTGGTTCTTGATGGATTTTTCAGGAGAATGAACAAAGACAGGGAAACCCC TTAGTATGATACATTAATTTCTTCTTTGATGTATCTCCTCCAACTCTATAAGAGCATTTATAGAGACTAACTAGAGTTAC TTTCCTGCCTGAGCAAGTTCTTTCTTTTCTTTTGTTTGCCGTAATTATGTGCTCACTCCGGTGTGTTAGTGGTACTGGTA GTTCATGATTGCAGCACAATCGATAACTTTCTTTTTGTTCTTTCTGGGTTACTTCATGTTTTTTTTTTCACTTTAACCTT CTTCGGTAGGAATCTATATCGGCTATCAGCTTCAGCAACAAGGCATCCAGATATATATGTTCGGGAGGAAGTGGTCAAGT TGTAAGGATATGGGATTTGCAAAGGAAGCGCTGTATTAAATGGCTCAAAGGTCATACTAATACTATCACAGGAGTAATGT ACAATTGCAAAGATGAATATTTGGCTTCTATCAGTCTTAGTGGGGACCTTATACTTCATAGCCTTGCTTCAGGCCAAAGG GCTGCTGAACTTAAAGATCCCAATCAACAGGTTTTTCTTCTTTGTTTTAAGTGAAATCCTCTGCTTCTTCGTGTTTTGGC TTTGTGTATGTGTATATGGACTAATCTGCCATTTTTGACATTGTAAGACCAGGTGTTGAGAGTTCTTGATTATTCGCGGG TGAATCGCCACCTTCTTGTTACTGCCGGTGATGAGGGGACAGTACATTTGTGGGATACAACTGGTCGCAGTCCCAAGGTA TGGGACGTGACAACTCCATGATTATATAACATGCTGCAACATTCTACAGTTGTGAACTTGGTTAATAGTTGAGCAATCAA TTGGTCTTCTATGTTCAAAATAGTAAATTAGTAATTAGTAATAGAGAACAACTTGTACTCGTTAGTCATAACATTTGTCT CTCATAAAACCTTTATAGTCGTGGTTTGATTGTATTGAAAAGCAACTTTTTTTTTCTGTTAGAAATATAATATATAACCA TTCATGTGACCTTTACTCAACATCTTAAGCTTCTGGGATAATTGGTTGTTTGACATGATATCAAAGCCTCTATGACTAAG TGGTCTAGAGTTGAATCCTTGCCGGCCCCAATACTTCTAAGAAAAAAAAGTTGAATTTAAGCACATGGTATGTGAGCATG TGCATTGTCCACGCTTCTTGCATGAGGGGGCGTGTTAGAAATACAATATAAAACCATTCATGTGGCTTTTACACAACAAC CTAAGCTTTTAGGAATTTAGGATAATTGGATTATCATTTAAACCATGTTTTGGGATCCAAAATTATCTTCAAACATAAAC CCAACCTTAGATTTGTCAACCATGTTAGTTTTTTATGAAACTCGGTTTGAGGCATGTAAACTATTATCTAAACATGCTAT TAATAATCAGTTTTGTCTTATTGTAGTTTAACGAATTATCTCTTTATGTAGGAAGTTTTCCTTTTTTGACGTCTCCTTTT TTTGTTATTATTTCAAATGTATACATTGAAATTGACTATATATTTTTCTTTCTTTTCCCTTTGCTTTTGAAAAAAAAGGT TTCTTGGATGAAGCAGCATTCTGCACCAACTGCTGGTATTAGCTTCTCTCCATCCAATGACAAGGTTTCTTTTTTCATGG ATTGTTTTAATTTTATATACATAACGAGGCTGTTTCATTCTGCTGTGAAGTCGTGACCCTTTATGATAAATTTGCTCTCT GATATCTTCCAATTGACAGATCATTGCTAGTGTTGGACTTGATAAAAAATTATACACTTATGACATTGGATCTAGAAGAC CATCATCTTGCATTTCTTATGAATCGCCTTTTTCTTCACTGGCCTTTCGAGATGATGGATGGATGCTGGCTGCTGGAACT GGCAATGGCCGTGTGGCATTCTATGATGTCCGCGGAAAACCACAACCTTTTGTTGTTCTTCATGCTTTTGGTAGTTCAGA GGTATTTTTTTGCTTCATTTACAGTGTTTTGTCTTGTCTTCATGGTTTAATGTTTTTAAGCCTTCAATTATTTACTGTTT AATATTTGCCTCACCTGATAATGAGATGTACATGGACTCATGGAAGTGGAAGTATTTGGGAACTACTTTGCATCTAACAC TAGCATAGCATGGACTCTTACCATAAAAAAAAAGAAAAACATAACATGGACTCATGGAACTATGGGGCTTCTTTAAGCTT CCTTAATTGCTTACAGTTAGTTTTTCTTAACCCCAGGTTGGGAGAAGTAGACATCATAAGATGTACAAGATTGATTCGCT TTTCCTCTTTGGTTACAGATGCCTCCTTAGCAATTCCCTTGCTTTACTGTAATGGGTAGGGATGGTACCTTATTTATGTT TTAATATTCTTGAAACTGGAAGTATTCTGAATAATTGATTGATTATTGATAGATTCAGAAGTACAACATTTATAGACTAG GCTTCCTAGTCAACTACAAGTCTAAAAAATAAATTCTTATCCTACTATCTACTCGTTTGGATGCAAACCAAAGAGCACTT ATTGGAGCTTATTTAGTGCATTTTCTTGTAGATAAGCTCTTATCTACAAGAAATCTTATCTAAAAGAAAATGCACTAACT TAACGATTTATTTTATCATAATTATATATCTTATCCTAATCTATCATAATAGAATCATAACAGAACAGTTCTATTGTATC TGAATATATCTCAACACTCCCCCCCTCAAGATGGAGCATATAGATCATATGCATCCGGCTTGGAACATATGTGTGATATC CTTGGACCCCTTGAGGATTTAGTGAAGATATCAACAAGCTGATACTTGGAGCAAACAAAAGAAGTTTTGACAGTGCTCGA AAGAATCTTCTGTCTCTGATAAAATGATAATCAACTTCTACAAACTCAGTCATCTCATGAAATACGCGATTTTGAAGCAT AAATTATTCAATAGCTGAAAAATTGTTTCCTGATTTCCTGGTTTTTAACTTCTGATATTTAATTGAATATAGATGTGACC ATGAATTGTTTCCCTGATGTGGACTGATTCTGCAAATGCAAAAATGAAGTCAGTCATTTAAAAATAAAAAGTTCTATCTT TAGCACTATAAAATAAAACTGTTTTAAATTAAGCATTAGTCTTCTGTGATTAGATCAGCAATTTATATCTGAACTAAATT TTCTCTTTTAATACTAAATTATTATAGCGTGCTACAGGCTGTTACGAGCTTATGCTGGCAAAGATCAAAACCAGTTACTA TTGATGAAAGAAATTGCAGTGCTGAGACTGCTCTTGTGGGAGATTCTGTTGAAGATTCAATCCTTATGCCTGATCCCTTA CCTTCAGCAACTTCATCAAGTGTTTCCCTATCTACATCAGTGTCTGGTACTAGGAATCCTGGTCGGCTAGGTGCCTCTGT TGAAGCATCTTCACTTATAGCATCAAACAGTGTATTTACATCAAACATGCATAATGTCTCTAATGCTGAGGAAACACCGC ATCGTAACCATTTATGGCCAGGTGGAACCCTTTCAAGGTTGCATGCTCCTCGTGGTAGTTATAACTTAAAGGATGACATG GAGGTATTCTCCCCTCTTGTGGATGTTCAGCCAATAACACCTTCGCTGTGGAATGAAAGTGGGACAAAGAAGGATAGTTT ATATGCAGATAGAAAATCCTTGTTGTTTCCATCATCCATTCGAAGATTTCCAAATTCAGAAGAAGGAATCAGTGACCATC CAATATCTGATTGGAAATCTGTCTCAACTGCCAAGCAGGTTATTGTCTCTCTAATATTGAGTTTACCCTCTGAAATATTG ATCTATAAACAAACCTTCAATTTGAAGCGCAATAAATTTTTATAAAATGCCATCCACGCCATTCAGTTAAACATTGTAAA TGTGTAGGACTTGAATTCCCTAAGAGGTGTTTGTTTCAAGTCATATAATTTCATTCTCAGAAATGATACTTCCAAGAACT TTATGACAGGGAATGTTATTCCTAGTTAACGTTTCTAAAAATGTTTTTTAAACTAAATTTAATAAAAAAATCAAAATATG GGAGAAAGAATGTGGTAGAAGGAAGTGGCAGTAGAAGTTGGAAGGTTTTCAGAATATCTTACAGTCTCATGGGAAAATAA CACATCTAACCTCATTATGGGTATTAAAAGCTAGCAAAATATGGCATGTTACTTTCTTGTGCATCAACAGTACCCTGGAG TATTTTGTATAGCTTGTAACAAACATAGAGTCATACAAGTTATGTTTTTTTAAAGCTTGTTTTAAATGTACAGTCAAATT TCCATTGAATAATTACACAAACCTTGAAACAAACACACCCTAATATGCTTGGGGCAGAGAACTTGGTTGTTGAAAAGAGC AGTAAAATTGGTTTTCTTTGATTAGAAATTCATTTCTCTTCCTGTTTTCCTGCCTTGTTAAACTTTGTCATCCAAGAATA CTCTTTATTGCCCACTGACTGTTGGCATGGGTTGTTTCAGTTTAATTATCCTTGATCTTATTTGCACCACGAAGAAACTC TTTTGAGGGCTTATTTTCCAAATTCTTAGCTAAAAGGTTGAATTTCTTTGGGGCCTAGAATTTCTTAGGAGGATTTGATT CATGTGTTTGATCTAACTATAATTTGCAGGAAGCCAATACTATAGAAGATAATCTATTAGACCTGTTTTATATATTGATT CATCAAATCATACCCTAGGTTTTCATGTATAATATGCTGCTTGATTTGAATTCTTTGTTGTATTTGGCAACATTCATTGT GTTTGGAATAACTAAAATTGGAAATAATTATTTGATTTTTGTTACTTTACATTTGTACTCTTATAAAAGGTAATTTGACA AGGTTAGGAAAGGTAAAATATTTTATTTATTTAAAATCAAGTCAAATGCTGACAAATCCGGTGACCTGATTTCTAAGTTT ATAGCAATTATATATCGCAGCCTTTCCCCATGTTAAACCTTTTAAAACAGATGATTTTGATGGACAAGTCATGTTTTTTA CATTCCAAACACCCTTGATATTTATTTATGACCAGTTAGATTATCCTCTTTTGACTTATTATATTGCATGCTAACTTGAT GTAGGATATTATTCAATCTTCCTTTCCACTTGTGGGGTCAACTCCTCCTCCATCTTCCAAGAGTGAAGATTCTTCCATCA CTCCTCCAGAAGCATGGGGTGGTGAGAAATTGACTGATAAATATACGTACCCAAACCAGCCTGTCAATTTACCATCTCGT TTGGGGATGCTGTCTTCTGCTGGTCAGACAGCAGGATCAATGTTATCTGGAATGCAGGACACACCCTCATCAACAGGTAC TATATACTATACCAGTTCGGGTGTAAGTTATGCTAATTTACGTGCCAAGGATGCCTCTGCGAGCCAGGAGACTTCATCGG GGTTTACTGATCACACGTTCTCTACTTCTTTGCCTTTGTCCATCAATACAAAAACTAGCCTTGGACAGGCAAATACTGAT TCCCCAAGAATCCTTGATTCCCCTAGGATGTCTTTTCCACGAAGATCTACTTATGCTGAAAGAATTAGCACTACATCTAC TTTCAGTGATGGAGTATCTCTTTCAGTTGGTTCACCAAAGATTAAGAAATCAGGAGCAGAAACCAAGGAAGATCTTCTGA ATAGTTTGCTGTTGAAGTCTGATATAGCTGCTCTAGCAGAATCAGGCTCTCTACCACTGACAAATGTATGTTATATTTTA CAATTTATATTAGATCTGATTATTGAATTGCATGTAGTTGTATTTGCTTTCAGAAGAGAGTACAGCATTTTTATTGAACT GCCATGTATGGGTTTCATTGATATAGATTGTGTTAGTTTTGGTGATATTCAGATCGCAAATTACTTACTGAATATCTATT GTAATAATCTGTCAATACACATTTTTTTAGTTTTCTTATGTTATTGATTTCTCAAATTTGATAGGGAATACTCTCACAAC AGAAAACATCTCAGTCAGATGCACAACAAGGATCTTCATTTACGCTGCAGCTTTTTCAGCGGACCTTGGAAGAAACTTTA GATTCCTTTCAGAGATCAATACACGGGGATATTAGAAACCTTCATGTTGAAGTATTACGACAATTTCATCTGCAAGAGGT ATGCATCTGGAGTAAGTAATGGTGGTTTCCATATTTCAATTTGTCTCTAATCATTTGTTTCATTCAACAGACGGAAATGT CAACCATGATGAAGTCCATTCTGGAAAACCAAGCCGAGTTGATGAAAGAAGTGAAGCTTCTTCGTAAGGAAAACCAACAG CTCCGACAAATGCTTTGATGGATTGCATATTTTTTTTCATGAGTGCCTTTGTCCTATCTTGTGGGTTTATTGTTTCTTTT ACCTACTAGCAATTAGTGCATGGCTTGTTATTGGCATTTTGATTGTGTCTCAGCTTTTAGATGGCGGTGGTTGAAGAAAA ATATCACGAGATAATTGCTTGTTACTGGGTAGGGCTTTAAAAATGTATAGAAATGATTTTCCATTATGGAAGCTTTGTTT GGGCCATTTCAATTTGACTGATTTTGAGTTCTTACTTGGCATGAAACTACCCCTTGTCGCCACTTTGCATTAGAAGCTGT AAAGGAGAGAAGCACGTTGATAAAACTCCACCAAAGCCATTATTTTCACTCCATTGTTATTTTGCTGTGCACGAAACGAG ACATTGGTTGTTTCCATCTTTCCCTTTGATAAGAGAACCCAGGCAACGAGACATTGGTTATGTTGTGAAAAAGACTAATA AGGCGATTGAGAATGAGCAGGGCTTGAGAATGGGAAGGATTTGAGATTGTAATGCTATCGTATCATCTCCCCCACTTATC TTTAAGTGCTAACTCACCGTTAAATTATTACATGTCCTACCGGACTGCACTAACTTACAAGCAATGTTATTGTAAGGTGA TAAGTGAAGGGAGTTTAATTTCTCACCCCCAATCACTCAATTTCTCACCCACTTAAATGTAGCAAAACACTATAATGCCC TCACTTAAGTTTGTTATTGGAATCTGAAAATTCGGAAAATGAGAACTTAATGTTCTGGGATTTAAAACCTAGAACATAAT TCAGAC
CDS sequence (LotjaGi1g1v0086200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTTGTTGGCAGCAAGCGGCGGCGACACCGTTAAGCTATTCGACGCCTCCGTCAAGCCCGGCGATCCTTGTACTCT CAGCTTCACCCCTTCTCCTGGTTCTCAAGTCCACTCAGTGAAGTGGAATCACACCAATTTGGTTGTGGCCAGTGCTGGGG ATGACAAGAGGATCTCCTTGTGGCGTAAGAATGGGCACAGCATGGGGACCATTCCGCTCGCCGGTACTGACAGCGGTGAC AACATTGAGGAATCTATATCGGCTATCAGCTTCAGCAACAAGGCATCCAGATATATATGTTCGGGAGGAAGTGGTCAAGT TGTAAGGATATGGGATTTGCAAAGGAAGCGCTGTATTAAATGGCTCAAAGGTCATACTAATACTATCACAGGAGTAATGT ACAATTGCAAAGATGAATATTTGGCTTCTATCAGTCTTAGTGGGGACCTTATACTTCATAGCCTTGCTTCAGGCCAAAGG GCTGCTGAACTTAAAGATCCCAATCAACAGGTGTTGAGAGTTCTTGATTATTCGCGGGTGAATCGCCACCTTCTTGTTAC TGCCGGTGATGAGGGGACAGTACATTTGTGGGATACAACTGGTCGCAGTCCCAAGGTTTCTTGGATGAAGCAGCATTCTG CACCAACTGCTGGTATTAGCTTCTCTCCATCCAATGACAAGATCATTGCTAGTGTTGGACTTGATAAAAAATTATACACT TATGACATTGGATCTAGAAGACCATCATCTTGCATTTCTTATGAATCGCCTTTTTCTTCACTGGCCTTTCGAGATGATGG ATGGATGCTGGCTGCTGGAACTGGCAATGGCCGTGTGGCATTCTATGATGTCCGCGGAAAACCACAACCTTTTGTTGTTC TTCATGCTTTTGGTAGTTCAGAGGCTGTTACGAGCTTATGCTGGCAAAGATCAAAACCAGTTACTATTGATGAAAGAAAT TGCAGTGCTGAGACTGCTCTTGTGGGAGATTCTGTTGAAGATTCAATCCTTATGCCTGATCCCTTACCTTCAGCAACTTC ATCAAGTGTTTCCCTATCTACATCAGTGTCTGGTACTAGGAATCCTGGTCGGCTAGGTGCCTCTGTTGAAGCATCTTCAC TTATAGCATCAAACAGTGTATTTACATCAAACATGCATAATGTCTCTAATGCTGAGGAAACACCGCATCGTAACCATTTA TGGCCAGGTGGAACCCTTTCAAGGTTGCATGCTCCTCGTGGTAGTTATAACTTAAAGGATGACATGGAGGTATTCTCCCC TCTTGTGGATGTTCAGCCAATAACACCTTCGCTGTGGAATGAAAGTGGGACAAAGAAGGATAGTTTATATGCAGATAGAA AATCCTTGTTGTTTCCATCATCCATTCGAAGATTTCCAAATTCAGAAGAAGGAATCAGTGACCATCCAATATCTGATTGG AAATCTGTCTCAACTGCCAAGCAGGATATTATTCAATCTTCCTTTCCACTTGTGGGGTCAACTCCTCCTCCATCTTCCAA GAGTGAAGATTCTTCCATCACTCCTCCAGAAGCATGGGGTGGTGAGAAATTGACTGATAAATATACGTACCCAAACCAGC CTGTCAATTTACCATCTCGTTTGGGGATGCTGTCTTCTGCTGGTCAGACAGCAGGATCAATGTTATCTGGAATGCAGGAC ACACCCTCATCAACAGGTACTATATACTATACCAGTTCGGGTGTAAGTTATGCTAATTTACGTGCCAAGGATGCCTCTGC GAGCCAGGAGACTTCATCGGGGTTTACTGATCACACGTTCTCTACTTCTTTGCCTTTGTCCATCAATACAAAAACTAGCC TTGGACAGGCAAATACTGATTCCCCAAGAATCCTTGATTCCCCTAGGATGTCTTTTCCACGAAGATCTACTTATGCTGAA AGAATTAGCACTACATCTACTTTCAGTGATGGAGTATCTCTTTCAGTTGGTTCACCAAAGATTAAGAAATCAGGAGCAGA AACCAAGGAAGATCTTCTGAATAGTTTGCTGTTGAAGTCTGATATAGCTGCTCTAGCAGAATCAGGCTCTCTACCACTGA CAAATGGAATACTCTCACAACAGAAAACATCTCAGTCAGATGCACAACAAGGATCTTCATTTACGCTGCAGCTTTTTCAG CGGACCTTGGAAGAAACTTTAGATTCCTTTCAGAGATCAATACACGGGGATATTAGAAACCTTCATGTTGAAGTATTACG ACAATTTCATCTGCAAGAGACGGAAATGTCAACCATGATGAAGTCCATTCTGGAAAACCAAGCCGAGTTGATGAAAGAAG TGAAGCTTCTTCGTAAGGAAAACCAACAGCTCCGACAAATGCTTTGA
Protein sequence (LotjaGi1g1v0086200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALLAASGGDTVKLFDASVKPGDPCTLSFTPSPGSQVHSVKWNHTNLVVASAGDDKRISLWRKNGHSMGTIPLAGTDSGD NIEESISAISFSNKASRYICSGGSGQVVRIWDLQRKRCIKWLKGHTNTITGVMYNCKDEYLASISLSGDLILHSLASGQR AAELKDPNQQVLRVLDYSRVNRHLLVTAGDEGTVHLWDTTGRSPKVSWMKQHSAPTAGISFSPSNDKIIASVGLDKKLYT YDIGSRRPSSCISYESPFSSLAFRDDGWMLAAGTGNGRVAFYDVRGKPQPFVVLHAFGSSEAVTSLCWQRSKPVTIDERN CSAETALVGDSVEDSILMPDPLPSATSSSVSLSTSVSGTRNPGRLGASVEASSLIASNSVFTSNMHNVSNAEETPHRNHL WPGGTLSRLHAPRGSYNLKDDMEVFSPLVDVQPITPSLWNESGTKKDSLYADRKSLLFPSSIRRFPNSEEGISDHPISDW KSVSTAKQDIIQSSFPLVGSTPPPSSKSEDSSITPPEAWGGEKLTDKYTYPNQPVNLPSRLGMLSSAGQTAGSMLSGMQD TPSSTGTIYYTSSGVSYANLRAKDASASQETSSGFTDHTFSTSLPLSINTKTSLGQANTDSPRILDSPRMSFPRRSTYAE RISTTSTFSDGVSLSVGSPKIKKSGAETKEDLLNSLLLKSDIAALAESGSLPLTNGILSQQKTSQSDAQQGSSFTLQLFQ RTLEETLDSFQRSIHGDIRNLHVEVLRQFHLQETEMSTMMKSILENQAELMKEVKLLRKENQQLRQML
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 788 | 787 | 0.0 | – | |
| Gene3D | 2 | 166 | 165 | 1.4E-21 | ||
| SUPERFAMILY | 7 | 309 | 303 | 2.5E-46 | ||
| SMART | 22 | 62 | 41 | 0.011 | ||
| Pfam | 28 | 61 | 34 | 0.074 | ||
| ProSiteProfiles | 30 | 251 | 222 | 22.913 | ||
| SMART | 64 | 112 | 49 | 0.66 | ||
| SMART | 115 | 154 | 40 | 0.015 | ||
| SMART | 157 | 198 | 42 | 0.71 | ||
| Gene3D | 167 | 317 | 151 | 3.3E-25 | ||
| SMART | 202 | 242 | 41 | 0.15 | ||
| SMART | 245 | 283 | 39 | 0.54 | ||
| MobiDBLite | 343 | 363 | 21 | - | – | |
| MobiDBLite | 343 | 362 | 20 | - | – | |
| MobiDBLite | 495 | 513 | 19 | - | – | |
| MobiDBLite | 495 | 532 | 38 | - | – | |
| Coils | 760 | 788 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0086200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…