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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0086500 |
| Transcript ID | LotjaGi1g1v0086500.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamate 5-kinase; TAIR: AT3G55610.2 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|P32296|P5CS_VIGAC Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|I1JI26|I1JI26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0086500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:12517381..12525123) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCTCAAACTTCAAATGCAGTTGCCAATGATGGTGTTTTTCTGTGTTTCATTTTTCAAGGTTGGAACTGCTGTTGTCA CCCGCCAAGATGGAAGATTGGCAGTTGGAAGATTAGGGACTCTCTGTGAGCAGGTCACCACAGCTCACCACACCTTCTAT AATCTCTGCTTCTTAATCTCAATTAATTAATACTAACAATAGTTCTTAATCTCCATTTTCCCAGATTAAGGAACTGAATT CCTTAGGATATGAGGTTATTTTGGTGTCATCTGGTGCTGTTGGTATTGGCCGCCAAAGACTCAGATACAGGAAATTAATC AACAGCAGGTCTCTCTTACTCTTACTTATATGCCTGCCATGCCACCCTTTATACTAAACTGCATTTTATTTAATTAATAA GTGAAGTTTATAGTGATTAGATATGTTTTCCCAGAAAAAGTAAAATCCTTTAAGAAAAAAACAAACTTTCTAATGAGTGT CATCAGGGTATGATTGTTTTAAAGTTTAGTAGAATTAAGTTTAGTAAACTTGAGTCTATTATAATTAAGGTCCATAGAAT TAAGTTTGAGATGAATTTGTGTTTGGAAATGGTGCTGTAAAAGTAATTTTAAAAAAAAAACTGGGTTTTTGCTTATATAG TAAGATAGAATGACTTTTGAAGTGTAAATATAGATATATTGTATGGATCCCACACTTAGAATGAATTACTCTTGATGGAA AAGTGAAAAACTCTCACTTTTGTTAAACCCAAGTTAAATCACCTGGCTATTTTTAACAAAATTAATTTTAACATTCAAAA GTAGTTATTTTCAACTGAAACTTATAAAAAGAGCAAGCTCTTAAATAGAGTAGCTTTCCCTGTAAGCTTGTGTTTTTTTT TTTGAAGCTTATCTAAGCATTTATAATGTAATGCTGCAGCTTTACTGAGCTACAGAATCCGCAATTTGACCTTGATGGCA AGGCTTGTGCTGCTGTTGGACAAAGTAGTCTTATGGCTCTTTATGATACTTTGTTTGGTCAAGTAATTATTATTACTTCA TCTTTTTATTTCCATCAAACTCTGCTCTAGAATTCCTTTTGTTACTACTGTTTTTAATGACTTGTTCCTTTTCAGTTGTT GCTAGATTTTAGTGCAGTTTAGAGAGATGTTTTATCTCTTTTGTCTATCTGAATTGCAGCTCGACGTGACATCTGCTCAG CTTCTAGTGACAGACAATGATTTTAGAGATAAAGATTTCAGAAAGCAACTATCTGAAACTGTGAAATCCTTGTTAGCTCT AAAAGTCATTCCAGTATTCAATGAGAATGATGCCGTCAGTACTAGGAAAGCTCCATATGAGGTTTGTTGCTATACTTGAC GACGAAATTTTAACAATATCAAACTCAGTCCTAGAACTGAGTTTCTCAAGTCTTTGCTCCTTTGCACATAACTAGTTCTA TGAATTATGTAATCTTTGTAGGTGATATGATCTAGGTTTAATCTGACAGGAAATAGAACTCAGAACTATATTTGTTTATC CTTTCCAAGTTTTTATCAACTTTATGTTTTAGATTTGAATTTTCATTCTGTATCCAACGTTTTCTCTACACCAATAAATA CCTCTTAAACATTTGGCTAGAACTGTGTCCACAATAACAAGCTTTATTAGGGATTTAATTTTTATTCTTCTCTGGATTTC AAGCATTCTCACTTTCTCAGTATATATGACCAAATTACAGGTGTCTGAGAATAAACTATATGATAAAGTAAGAATGCTTG AAGTCACTTTCTCAAACTTTATGGGCTTGTAACTGTCTTTTAAGCTTGAAGTTTAATTTTATGTGTGCTTCTTTGAATGT TTGCTTAGCTCCTTTCATTTAGAACTATTTAAGTGCTTAAAGTGTCATCAACTCATATTTTCTGCAGGATTCTTCTGGAA TATTTTGGGATAATGATAGTTTATCTGCTTTATTGGCTCTGGAGTTAAAAGCCGATCTTCTTGTTTTGTTGAGTGATGTT GAAGGTCTTTATAGCGGCCCTCCAAGTGACCCACATTCAAAGCTCATTCGTGCATATATTAAGGAAAGGCATCAGAATGA AATTACTTTTGGCGACAAGTCTAGGGTGGGAAGAGGTGGAATGACAGCCAAAGTAAAAGCTTCTGTTCATGCTGCTGAGG CTGGCATTCCTGTTATTATTACCAGGTTTACTATTAGACTCTATTACTGAGAAAGATTACACCTTAAACTGCTGTTCTGT TTTTTCATTTTTAAAAAAATATGATTGTTGAAGGCATATTATTCTACCCTCTTTAGGTAGTTAGGTAATTATTTATTTTA TTATTAGAAATATATTATACAACTATTCATGTGTTCACCCAACAGCTTAAACATTTGGTATAGTTGGTCCATAACATTTA TCATTGTCATTAGGTCATGACATGTGGACAAACTATGCTAAACCACTAACAATTTTGGAATATGAATAATACATTTAAAA AAAATTTAACTTATACACTTGCCGCCAGTTTCTCTGGTCTTTATCCTTTCATTTTATTCTATAATGTCTTTTCATCCACC TCTTTTTTCCATTTAGTAAATTTAAATGAAAATGTGTATATGGACACAAACGCAAAATTAAAGAATCCCTTATGGCCGTG CCTCTTCTTTATTTTCCATTTGTTGATCTGTACCAAAATCACTGAGATTCAGCATGGGCACAAACTATATCGGATGCTCA TCTTTGGAAGCTGGTTTTTCCTTACTTCCATCACATTTTTCTCTCCTTTCAGTGGTTTTGAAACTGAAAGCATCATTAAC ATTCTCCAAGGACAACATATTGGAACCCTCTTCCATAAAGATGCACATGAGTGGACCACATTGAAAGACGTTGATGCACG CGAGATGGCTGTTGCAGCCAGGGAATGTTCCAGACGGCTTCAGGTATCTTTTCTTTATCACACATAATGTGTGATTTATG TGTGATAGATCATAGATAATATGCGCTGTATGTGAAATACTCCGAGTTTAACTTTCTCATATCCTAATTTTACTTCACAG GCATTATCTTCAGAAGAGAGGAAACAAATTTTACTAAAAATAGCTGATGCGCTGGAAGCAAATGAAAAAGTGATCAAGAA TGAAAATGAAGCTGATATAGCTGCTGCACAGCAAGCAGGATATGAAAAATCTTTGGTGGCTAGGCTAGCTTTAAAACCTG GGAAGGCAAGACATTTCATTTTTAGAATAAATCATCTGAATTTTAACAAACTGAAAAGTTTTTGATGATAATCATAATAT ATGATAACTGACAGATTGAAAGCCTTGCGAACAACTTGCGAATTATTGCAAATATGGAAGAACCAATTGGCCAAGTATTA AAACGAACTGAGGTAATGAATTTATCTGGAAATGTATTCCTGGATCAATGTAGCTTATGAAATACCATTTGTGAGAAATT TATAAAGCAGGATCAGCTTCCCTTCCACTTACTATTAAACTGAAGATTCTAATTTTATGTCTTTCTACTAGATAAAACGG ACTCATGTTATTCACAATTTTGTGTGAAGGCATTGTCCAAAGTGTGCACAATTTTTTCTTGGATATGATTGCACAATTTT TTGTTTTTTCTTTATAAATATTGATCTGATTTGTTTTTCACTGCTGCCAATTTATTTAGCTTTCAGATGGGCTAATTTTG GAGAAAACATCATCTCCTTTGGGAGTTCTTCTGATTATTTTTTAGTCTCGCCCTGAGGCACTAGTACAGGTAAATTAAAC CCTACCAATCTTCTCTGTCTCATTTTCTCTCTTCACCTTCTGTTTTATACTTAAGCCAGTTTTCCCCAAAGGAAAAACAC TTTTTTCATTTACTTTTTCACTTTTGTTGAGCACTTATATTCATCTGCTATCCTTGTTCATTGTTTTTTCAAGTGTCAGC ATTCAGAAGGTATTAGGGAAGATCTGTTAAGAGGGAGATCTGTTAACCTAAATGAATTTTTTTTTGGGGTGGGGGTTGCT TAAATGAATGTGTGCTTTCAAATAAGCTTGATAGCATGGGGTATCGAAATTTAACAGATATATGGTACTTATCTGTAAAA TTGAGAGGTTCTCATCCCCTTGGGCTGTATTGGTAAAAAGGGGATATTTTGTCCTTTAGACGTATGTGCTAGCAAATTGA GCTTTTTAATTTTTTAATGTTACTGCAAATACATTTATTGTATGCATAGGTTTCTAATTGATTAAATGAATCTGAAGTTT AACTGTTTATCATTATTGATCTGGTCGCTTTGTATCTTTTGAACAGATAGCTTCCTTGGCAATCAGAAGTGGGAATGGAC TTCTCTTGAAAGGAGGCAAGGAAGCTTTGCGATCAAATGCAATTTTGCACAAAGTTTGGTTTCAAATAAGATAATCTTAA ACTATTTTCTGTTTGAATTTAATACTGTCTGGCAATCTCATTAATAAATTCTTTTGGGGGTGGTTCCTGTTCTGGGATGC AGGTAATTACTGAAGCCATACCAGATACTGTTGGTGGAAAACTTATTGGACTTGTGACATCAAGAGCAGAAATTCCTGAA CTACTTAAGGTATATTTATCAGTAGAGCTTAATTGCAGATTTATGAACTTGTTCCGTTTGAAATTATAACCTTTTAGCGA AACAAGGACTTCAATTCATTTAACTTTCAGCTGGATGACGTAATTGATCTGGTGATTCCAAGAGGCAGCAATAAACTTGT ATCTCAGATCAAGAGTTCCACAAAAATTCCCGAGTTGGGTCATGCAGGTAAGACCATTGTGCTTATGTTTATACATAATA AGCGAGCAATTGATAGATACACTTAGTTAGTTAGTTGGGGTTAGTAACTATAAATTGGAAGGTTGTAAGAGTGTTGAGTA TCTTTGGGATCATTTGGGAATTGGGAATTAGGAGAGTGATGAGTCTCTCCAATACTCATCAGTTACTTATATCCTTCTCT AATTCCCCAATTGGGAATTATGGTTCATCTTGAATAATACTCTTTCTCTCTACATTCTTGGCTGGATCTTATCAGCAATG CTTGATTGCTTGATATGGTATGGTAAATCCTAGTGAAAGAATTTATTAGTGACTATCATAAATCATAATAAGGTTCATTA TTACTGATCCAGATGGAATTTGCCACGTCTATGTTGACAAGTCTGCTAACACGGAGATGGCAAGGCAGATTGTACTGGAT GCAAAAGTATATTATCCAGCAGCCTGCAATGCCATGGTAAATTAAATGTACCGGATGACCGTGCAAGATTGCTGATGTTA GCTATTTTCTTTGCTCATGAATCACTGCCATGCATAACTTCTTTTTGTCTGCTTTTAAAATTTTAACTCTTAGGAAACAC TTCTTGTCCACAAGGAGTTAATAGAGAAAGGTTGGCTTAATGATATTATAGTTGACCTACAAACGAAAGGTATAATTTCT TGCAATCATTTCCTCTTGTTCTTGATTCTCTTTCAACAGGTGATAATACAGTTTGCTTTAATTTCTGGATACTACTCATT AGGTTTTGTTTGTAGCTCTAGCTGGATAAAGGTTTTTGTTGTAATTTCTCATTTCTCTCCAAAAATATGACATTTAAACA TTTGATTTTCGTGATTGCGTAATGATAATAATTATCAGGTTGCAATCAAGTCTTTTAATATGCCAAGTTTTTTATCCTTT CTGGAAGTTTAAGGACTCATGCTAATGCATGGCTGCAAAATGCATGCTCTTTAAGATTTGGATTAGAAGATAAGAACCCG CGTTATCTAATAAACTCAGTTGGCAATATTTTTTTATATATTTTCTTATGGGAAATATGGTGTTGGTTTTGAGGATGTTT GTGGGTAAATAAGATGTAGGTTTTGTATCTCAACCAAACCCCTAAAGCCACTCATGTTAGATTTTACTGCATAGAGTGGA TGTAATAACACATAGCAAAGCTGAATTTTATATGATGAACAAATAAGGAATTTAGTTGTATGATTTCTTAAATTCTCTTG AGCAAATTCTGTTGAGAAGACAACATAAAGAAAGCATGAGTATGATGGTTTTAATGCTATGTCTCAGGGCCTTCTGCATC ACAGTGCTTGTAATTCCAGATTCCAATCCATTGTGAACAAATTTTACGCTCATACGCTGAACATTATAAAGAGAAGCATA TTTAAATATCTATTATTTAATGGTTTAGAGTTTGTTCACGTAAATTTCTAATATGGGCATTTATTTCCTTTTGGAACTGA AACTTTCATGTTCAAAAAGATCTTAGATATTTAATTTTAAATGCTAATCGAGTGTCAAAAATCTAAATAATGTTCATTAT TCTTCTTTTTGTTGATTAATAAATATTAAAGAAATTTAAACGATCTTCTAGGAAATTAAAGAAAATGAAAGCCATCCCCA AGATTTATATTGCAATCTATCTTTATGTTAACCTAAGTCTTGCATCCTTACTAGTCTGGTGCGTTGTTTCATCATTTTAA AGATTGAAAAATTTATCATATTATCTGGGAGTCGGAAGACTGTTATACTGAATTGATAGGTGTTACTATCTTATTTCAAA TGCAAAAATGATGTAAAATTTATGCAGGTGTTACATTATATGGAGGACCAAAGGCAACTTCTTTGTTAAATATTCCACAG GCACGTACGTTTCATCATGAGTACAGTTCATTGGCTTGCACTGTTGAAATTGTGGATGATGTGTATGCAGCTATTAATCA TATAAATCTTTATGGAAGGCATGTCAGTGTTTTATTCTTTATTAGAAACGTGTGAAACAGATTGCTTTCATTTCCCTTCT ACTCTCTGTTCCAATTCAAACCGACATCTATATTGGTGCAGTGGGTTAATATGGAAAAATATCATATCTTCTATTTCTTT GTGTGGCAGTGCACATACTGATTGCATCGTTGCAGAAGATCATGAAGTAGCTGATGTGTTCCTACGCCAAGTAGACAGGT AATATCTGAAACACCATGCTCCTTAATCTCGTTTCTGCAATGATAAATAATAAATACAGTTGAAAAAGATATTTCACTCA ATTCTCTACTTTGCAGCATTTTGTTATTGTGTAACTATTTGGCAGTCTTTGACAAAGTTACACAAAAGTATAACATTAAA CAAACATTACCCTTTAAACTATCACTGCTTTCTCAGAAGATATCAGCACATTGTGCAATGGAAGTGATGTAATTATCGTT TGTCTTGTATTGATAGTGCGTCTGTTATTCACAATGCAAGCACAAGATTTTGTGATGGGGCACGATTTGGACTAGGTGCA GAGGTATGTTTTTTCTTTTTTTGCATTTTCTAATCAATCTATTGAATTAATGTTGTTGATTTAATTTTGTATTTCTGTCT TGGTTGAATAGGTTGGAACAAGTACAAGCAGGATTCATGCTCGAGGCCCAGTTGGCGTTGAAGGATTGTTGACAACAAGA TGGTATGAGCTGGTGATCATTATAATGCTTAAGAAACAGTACAAATCTTGTACTATACAACTAACAATTCCATTCTGTCT CTTGGTTAATATATGTACTTGAATGTCACTAATCACTTTTGCATGAGGAATGAAAGATTTATCATTCATATAAAATTAAT CTATATGTGCTAATAAAGGACTATATAGTTTACATTTCAGCCTCTCATTTGTCACTTATAATCTACGAGCCTGTTTGGAT TCAGGCTTATTGGAGCTTAACTACTCCAGAAAGTGCACTAAATAAGTTTTAATAACTGTTCTT
CDS sequence (LotjaGi1g1v0086500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGTTGCCAATGATGGTGTTTTTCTGTGTTTCATTTTTCAAGGTTGGAACTGCTGTTGTCACCCGCCAAGATGGAAG ATTGGCAGTTGGAAGATTAGGGACTCTCTGTGAGCAGATTAAGGAACTGAATTCCTTAGGATATGAGGTTATTTTGGTGT CATCTGGTGCTGTTGGTATTGGCCGCCAAAGACTCAGATACAGGAAATTAATCAACAGCAGCTTTACTGAGCTACAGAAT CCGCAATTTGACCTTGATGGCAAGGCTTGTGCTGCTGTTGGACAAAGTAGTCTTATGGCTCTTTATGATACTTTGTTTGG TCAACTCGACGTGACATCTGCTCAGCTTCTAGTGACAGACAATGATTTTAGAGATAAAGATTTCAGAAAGCAACTATCTG AAACTGTGAAATCCTTGTTAGCTCTAAAAGTCATTCCAGTATTCAATGAGAATGATGCCGTCAGTACTAGGAAAGCTCCA TATGAGGATTCTTCTGGAATATTTTGGGATAATGATAGTTTATCTGCTTTATTGGCTCTGGAGTTAAAAGCCGATCTTCT TGTTTTGTTGAGTGATGTTGAAGGTCTTTATAGCGGCCCTCCAAGTGACCCACATTCAAAGCTCATTCGTGCATATATTA AGGAAAGGCATCAGAATGAAATTACTTTTGGCGACAAGTCTAGGGTGGGAAGAGGTGGAATGACAGCCAAAGTAAAAGCT TCTGTTCATGCTGCTGAGGCTGGCATTCCTGTTATTATTACCAGTGGTTTTGAAACTGAAAGCATCATTAACATTCTCCA AGGACAACATATTGGAACCCTCTTCCATAAAGATGCACATGAGTGGACCACATTGAAAGACGTTGATGCACGCGAGATGG CTGTTGCAGCCAGGGAATGTTCCAGACGGCTTCAGGCATTATCTTCAGAAGAGAGGAAACAAATTTTACTAAAAATAGCT GATGCGCTGGAAGCAAATGAAAAAGTGATCAAGAATGAAAATGAAGCTGATATAGCTGCTGCACAGCAAGCAGGATATGA AAAATCTTTGGTGGCTAGGCTAGCTTTAAAACCTGGGAAGATTGAAAGCCTTGCGAACAACTTGCGAATTATTGCAAATA TGGAAGAACCAATTGGCCAAGTATTAAAACGAACTGAGCTTTCAGATGGGCTAATTTTGGAGAAAACATCATCTCCTTTG GGAGTTCTTCTGATTATTTTTTAG
Protein sequence (LotjaGi1g1v0086500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQLPMMVFFCVSFFKVGTAVVTRQDGRLAVGRLGTLCEQIKELNSLGYEVILVSSGAVGIGRQRLRYRKLINSSFTELQN PQFDLDGKACAAVGQSSLMALYDTLFGQLDVTSAQLLVTDNDFRDKDFRKQLSETVKSLLALKVIPVFNENDAVSTRKAP YEDSSGIFWDNDSLSALLALELKADLLVLLSDVEGLYSGPPSDPHSKLIRAYIKERHQNEITFGDKSRVGRGGMTAKVKA SVHAAEAGIPVIITSGFETESIINILQGQHIGTLFHKDAHEWTTLKDVDAREMAVAARECSRRLQALSSEERKQILLKIA DALEANEKVIKNENEADIAAAQQAGYEKSLVARLALKPGKIESLANNLRIIANMEEPIGQVLKRTELSDGLILEKTSSPL GVLLIIF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 7 | 14 | 8 | - | – | |
| Hamap | 10 | 279 | 270 | 28.674 | ||
| Gene3D | 11 | 280 | 270 | 1.1E-82 | ||
| PANTHER | 13 | 407 | 395 | 6.1E-226 | – | |
| PANTHER | 13 | 407 | 395 | 6.1E-226 | – | |
| TIGRFAM | 14 | 282 | 269 | 9.0E-63 | ||
| SUPERFAMILY | 14 | 277 | 264 | 3.53E-54 | ||
| Phobius | 15 | 19 | 5 | - | – | |
| Pfam | 15 | 255 | 241 | 4.3E-35 | ||
| Phobius | 20 | 407 | 388 | - | – | |
| PRINTS | 47 | 61 | 15 | 4.4E-59 | ||
| PRINTS | 91 | 119 | 29 | 4.4E-59 | ||
| PRINTS | 131 | 152 | 22 | 4.4E-59 | ||
| PRINTS | 170 | 197 | 28 | 4.4E-59 | ||
| ProSitePatterns | 227 | 244 | 18 | - | ||
| PRINTS | 229 | 249 | 21 | 4.4E-59 | ||
| Gene3D | 281 | 407 | 127 | 2.7E-34 | ||
| SUPERFAMILY | 289 | 407 | 119 | 6.68E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Glutamate 5-kinase activity | Catalysis of the reaction: L-glutamate + ATP = L-glutamyl 5-phosphate + ADP + H(+). | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Proline biosynthetic process | The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0086500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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