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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0100700 |
| Transcript ID | LotjaGi1g1v0100700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ras family protein; TAIR: AT5G45130.1 Ras small GTP-binding family protein; Swiss-Prot: sp|P31583|RHN1_NICPL Ras-related protein RHN1; TrEMBL-Plants: tr|I3S087|I3S087_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0100700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:15290974..15295964) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTACGGTCGGACACAACAATCTCAATGCCAAATTGGTCTCTCTCTTTCTCACTGTTCTCAATTCCCTTTTTGTTTA ATTTTCGTTGAATTCGATTTCTTGTTTGGCTAATTTTGCTGAATTGAATCTCAGGTTCTCCTCGGGGATATGGGTACTGG AAAATCCAGCCTCGTTTTGCGTTTTGTCAAGGGTCAATTCCTTGAATTTCAGGTTATTTCCTATCCCTTTTGATTTCTCT GTTCAATTCGCTGCTCGCCAAATTCAAATGTTTACGGATAATTTTTGGGATTTTAGAGGGGAATCAAGTGTAGTGTGTAG TTCGTGGGTAACAGGTGTTGTTGCTTGTTCAATTTTGTATTTGATGCTGCTTGTGGCATGAAAATTGTGTTTTTTTTAGC CCCTTTTGCTTTGTTTTGCTGTTGACTGAATAGAAAATGGGGTTCTACTGTTTCAATTTTCAAATGAAATGTTTCTAAAA GTTATGAGCATGTTGGAGGGAGAATAATAGAGAAATTTCAGCTGAAAACAAAGCTTTCCGTCCCAATTTGATGACAATTT TGCAGCTTTAGAGCTTAAAATGGGAAAGTTTTTAGTATGCATTGTGTAATACTCTTAACTTGGTAGATTTGGTTTCAACT TTATATCTTAGATTTAATCTACTAACATGTATTGTTATGCAGTCAATGTGTTATGTTTAGTGTACTGAATGTGATAGTAT TACTCTCATAGTACATTAGATTTTAGAAACTTTCTTTAAAATTGGGATTTGCTGTACCGAATTTTCAAACATTTATTTGA TTTTTTTTCACAATAAATTTTTAGAAGTTCAATAAATATAATAAGCAGCCAGTAAATGCTAACCTCGGAAGCATGGGTAC TTCATTTTGGCTCCCGTACCTGTTCCGGGTGTGAATCCGTACCCGGAACTCATTGGTACTTGTAAATACATGCCGCGTAC GTGCCGAAATAATTTTTCAATAAAACGAAGGGTACTTATTGGGTACATTTTAGCCAAAACAAATTTTTTTTTTATCAGTT TTTATTTTACTTTTATATATACATGAACGAAACCCTATCTATGTAACACATAGAAAACCGTAACACCCTACCTGTGTACC TAATCTACATCAATCAACTGTCTCGTTCCTACCTGGCCAATGCTCGCCTGCGTTGGTTGATGGTTGATAAGTTACTAAGT TCGAGTTTCCTTTCTTAATTCGTGTACTAGTTTCCATTTCTCCGATTTATTCTATTAGTTAGTTTAACAGCAATGTATAT TTTGTTTTATTGTGAAGATATTTTGTTGACTTGTTGAAAATATGATCTCCTTATATACACATGCGCGCATACACTCACCC TTACACACACACACACATATAAAAACGTACTCGTACCTTAATTTTTTTGAAAATCTTGTACCCGCATCTGTGCAGCATAG ATGCTAACAATTCACCTTGGGTACCTGTATTCATGAGAGAAATATGGGTATCAGAGTAATTTCCCTTAAATTGATACCTC ATAAAAAGTGTGGGTAGGGTTGGTGGGGAGAGAGTGAGAGATTATTTCTTCTGTTTATGGTAGTGTTGACATCATTGGTT ATGGGTTCTTAGAGCTGTTACTTATTGCTAAATACACACACGTGGATATTATGTTGCTGAATTTATGTGATCTGTTTGGG AGACAGGAATCAACAATAGGGGCAGCATTCTTTTCACAGACACTGGCAGTAAATGATGCCACAGTGAAATTTGAGATTTG GGACACAGCAGGACAAGAGAGATACCATAGCTTGGCTCCCATGTATTACAGAGGCGCTGCTGCTGCTATCATTGTCTATG ACATTACTAGCTCAGTATGATTTTTTTGTTTTTAATATTTCTGATTACCTGTTTATATTGGTAACATTTAATATAATATG ACCATCTGTGTATATTAACATAATAATATGCCAATGACGGGGAAATAAGGAACATGAATGAAAATTTTGCTTCCTGTTTC TGTTTGCACTTTCTGATTAGTCTCCAAATTACAATGGGAGTAGTAAATCTTATGCTATTGAGGCCAAGCTTTACTGTTTT GAGTATGGGGATGAACAGGTGCTTCTTTTACTGCTTTTCTTACTAATCCTGTAGTATAATTCAATAAGTAAAGAAGATAA ACATATCTCAGGCGGCAGAGTAGCAAGTCTAGAGCCTTAAAAGTGATGAGTTCCAATTCTTGACCAATTCATTTTTATTG CAAGATATTCCTCTTCAGCTGTTCATGTGTTTGATCCTTATCATGGAATACATGATTTTCCTTCTCTGCCAAAAAACCTT CGGCAAGACATTCCAGAGAAATCCTAAATCTTTGTTGTATACACAGGGTCCACTCATTCTATCTAATCTTCACTAATTGA AACTCATGCTTGTTAGGAAGATATTGATGTGAAAGAATTCATTCAATCTTATGATCTGTATATTCATTTTCCTTTCGTTA GGTTTGAGAGACCATGTTTTGATATTTTAGCTGTTTACTATTTAATGTGGTTTTATATGATTATTTATATCTTTCAATCA CAGGATTCATTTACAAGAGCTAAAAAGTGGGTCCAAGAGCTTCAGAAGCAAGGTATATTTGCTGATTGGTTTTGAAGTTT CTTATGCTCCTTTTAGGAGAAATAAAAAGGAAAACCGATCTACTTATTAACCCTTTACAAACTTCTGATACAAACTATCT GTAAAGCAATCTTGACCATATATTTAAATATTCCATTTGTGAAATTTGTTTTCTTTTCTGTTTTTCATGAACTTGACTTT GGAATAAATAACATTAATTGTTCAATGAAACTATAATCATGTTTTATAATAGCCCGAACTTGGTTGGATAATACATATGA ATGATGATGTGAGAATGATTAATGCATGAGAGAAATGTGAACAGTTAGGCAGATTTCCAAAGAAACAATTGATCAAGTCT TGTGAGAAAAAAGAGGAGAATAGTTGCTTTGAAGTATTATAACAAACATGGTCTACTTTTGAACTTCCCTATAGTTAAAT CATTAGATTCTCAAATAATGCATTCATTTTGGTGTTGTTGTAGGGAATCCTAATATGGTTGTGGCCCTAGCTGGTAACAA ATCTGACTTGGAAGATAAGAGGAAAGTGACGCCTGAAGTAAGTGTTATAGTGATTTCAATTTTCCTATTAAGGCCTCATA TTAGCTATAAGAATTATAATTTCTTTAACAGTATGGCCAATTACCTGCAACTATGATGAAGCAATTTTTTTTCCTAATAA AATTTCAAATGATGGTTTCATTTGATACTTTAAACGTTGTTGGTGCCTGATATTTTTTTATTTTTGGATACTATTTGATG TTAACTTCCAGGATCTATAGCTTTGTATGAAATAAAACCTGTTCCCTCTATAAATCATGTATTGAGTTGTCAAATACATG AATTCTGCATACACGTCCGACTGGGACTTTTTTGCTACAGTTTAGATGTTCTGAGCAGTGAGCATATTCATGTGCAGCTC TGTATATTCATTCCTTGCATCTTGAGAACTTATATGCTAATAAACCTAACATGTTCACTTCTTCTAAAACTGGTGGTAAA GTGTCTTATTTCCATGCGTTGCAGCTTGGAATTAATCTTCTTACCAAGTCTTTTGATATTAGTGTTCTTTTAAAATGAAA ATAAATAAGCTTAACTTTGAAAGGTTTATCTTTGAATTTATCTCATTACCAAGTCTTTTAATATTAGTGTTCTTTTAAAA TGAAAATAAAATACACTAACTTAGAAATGTTTATGTAGAGTGATTCTGTCTTTAGAACCAACTTATCAGCTGTGACTCTT GTGAAATGTAGGAAGCACGCGTATATGCTGAAGACAATGGTCTATTTTTCATGGAGACCTCTGCAAAAACTGCTGCCAAT GTTAATGATGTATTTTATGAAATAGGTGCGAGTCTTTTCCTATTACATCAACTTAAGGATGATTAATAGTGCTTTTTCTT TATTTTAACTTAATTGCATGAGAAAAATCAAATAATGGAGAACAAGAGAACATGATTTAAGTCAGTCCAAGGAGAAGGAA GGATGCAAACACTTCTTTTGAGGAAATATCTGTCCCTGCTTTGCTTTGCAGGCCAATAGACATTTCCTTGGTCTTCACTA CTGATTGAATATACTGTTTGTGAACCAAATGAATTTATTATTCCTATTCTGGTTTTGCTGAATCAAAGGCTCATATGGGC ACCTGATCTTCAATTGAATTGCACCAAATGAATGTGCTTTTCCTGTTTTCTCGACGTATATAGCTTTTCGATGAATGACA TTCTATCAAGCATTCATGAGCAAGCAAATTAGTTGATGAATTTGTTAGGCCTAACATGTAGGACTTAGCTCACTTAACTG TCAACTTTTCCTTATAAATTCTAGAGTTTTTTATATGGTTTTTATTTTGCTACAAAAGAGAGGACTGTATTATGTATAGT ACACTCAAAAAAGAGAAATTTACTGTGGTATGGCCATATTATCTTATCTTGCATGTGCTTTTTTATTGTACTTTTTTTTG TTGATAAATTTGATTGATTGTACTTCTTTTGTGTCATAAACTGTTGAACTTTGTATGCTGCTCAAATAGTAGGGCTTAGG TAGAGAAAATGAATATTTGTGTGTAAGATGATTTGCTCAAATATAAGATGATTTTTTAACATTGATATTTATGTGTAATA AACAATGTCATTCCAAAATAGGGACTCACCCAGATTGGGTTTCCACTAGGATCCTCTGAAAATATCTTTAGAATATGTTG TGAAGATATGCACATTTACTCTGAAATACTTTCAAGATATTCTGAGATCATATTCTAACACATACGTTGTTTGATTTGCA TTTTCAACAGCCAAGAGGTTACCAAGGGCACAGCCTGCGCAAAACCCAGCAGGGATGGTTCTTGTTGATAGACCTGCAGA AGGATCCAGAGCTGCATCATGTTGTTCATGA
CDS sequence (LotjaGi1g1v0100700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTACTGGAAAATCCAGCCTCGTTTTGCGTTTTGTCAAGGGTCAATTCCTTGAATTTCAGGAATCAACAATAGGGGC AGCATTCTTTTCACAGACACTGGCAGTAAATGATGCCACAGTGAAATTTGAGATTTGGGACACAGCAGGACAAGAGAGAT ACCATAGCTTGGCTCCCATGTATTACAGAGGCGCTGCTGCTGCTATCATTGTCTATGACATTACTAGCTCAGATTCATTT ACAAGAGCTAAAAAGTGGGTCCAAGAGCTTCAGAAGCAAGGGAATCCTAATATGGTTGTGGCCCTAGCTGGTAACAAATC TGACTTGGAAGATAAGAGGAAAGTGACGCCTGAAGAAGCACGCGTATATGCTGAAGACAATGGTCTATTTTTCATGGAGA CCTCTGCAAAAACTGCTGCCAATGTTAATGATGTATTTTATGAAATAGCCAAGAGGTTACCAAGGGCACAGCCTGCGCAA AACCCAGCAGGGATGGTTCTTGTTGATAGACCTGCAGAAGGATCCAGAGCTGCATCATGTTGTTCATGA
Protein sequence (LotjaGi1g1v0100700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSF TRAKKWVQELQKQGNPNMVVALAGNKSDLEDKRKVTPEEARVYAEDNGLFFMETSAKTAANVNDVFYEIAKRLPRAQPAQ NPAGMVLVDRPAEGSRAASCCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 154 | 154 | 1.11525E-109 | – | |
| PANTHER | 1 | 181 | 181 | 3.2E-92 | – | |
| ProSiteProfiles | 1 | 181 | 181 | 31.375 | – | |
| PANTHER | 1 | 181 | 181 | 3.2E-92 | – | |
| SMART | 1 | 156 | 156 | 1.6E-73 | – | |
| Gene3D | 1 | 181 | 181 | 5.6E-59 | – | |
| Pfam | 2 | 153 | 152 | 8.8E-56 | ||
| SMART | 2 | 182 | 181 | 2.2E-5 | – | |
| SUPERFAMILY | 2 | 158 | 157 | 2.58E-50 | ||
| SMART | 2 | 156 | 155 | 1.6E-9 | – | |
| SMART | 2 | 156 | 155 | 1.8E-22 | – | |
| TIGRFAM | 3 | 149 | 147 | 7.8E-25 | ||
| PRINTS | 16 | 32 | 17 | 1.7E-25 | – | |
| PRINTS | 34 | 56 | 23 | 1.7E-25 | – | |
| PRINTS | 96 | 109 | 14 | 1.7E-25 | – | |
| PRINTS | 131 | 153 | 23 | 1.7E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0100700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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