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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0104000 |
| Transcript ID | LotjaGi1g1v0104000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metal tolerance protein; TAIR: AT3G58060.1 Cation efflux family protein; Swiss-Prot: sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4; TrEMBL-Plants: tr|V7B8T4|V7B8T4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0104000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:16074142..16078914) extracted from Lotus japonicus Gifu genome v1.2.
AAAGATTATGCTTTACAAAAATACTCATTACGTACCAGCTAGCGGTTCGTTCAAATAATACATACTTGATTCACCTTACA ATGTTTCAAGCTTGAGTCATGTGGATGGAAAAAACCTTGTTGCGAGAGTTAACATTACCATTATGTAGATGTTTCTGACT CAAACAAGATTGCTTCCGAATACTTATAAGCAAAAATAAAAAAAATGCTCATTACCTAAAATAAATAAAAATCATTCACC GTGAGCAAGCCACTTAATCATAGTTAACTCACAAACCGCTTTATAAGTCAGATACTCAGATTGCAGTGTTGCATGCTTCA TGCTAGCTACTTGTGGCATGGTGCATGATGCAGCATCCTTGTTGACAAAAACTCTACACGAACCCCAAATTTAGAAGAAA TTGTTTTATTGAAATGATACTTTAATGGAGTGCAATCATACATCTCCATGGACACGGTCAATCTTATTCTATATTTCACA AACACACACTGTTGAAAATATCGACGGGTTTTACTTTGGTTGCTGAGGCCTAAAACAACAATCATTCTTTGCCCGGGCTT GGGATCGGCTACGCAAGCATAGGCGGAGTTAGTTCTCACACACATAAATAACAAATTGCTACATGATTACCAGTAGCACT AGCTGAGTAGCAGTGATTGATGGAGGAGGATTCGGGTTCCGGGCCTCTACTGAGGAACCAGAACTCTTTTAACTTGCTTA CAACCACTTTCTTATCCAACTTGCCCCATAAGCTCCGTTCTTGCCTCGATTCTGAGTCTCCCTTTGACTCCAACCTTCAT GTCTCTACTACCACCAACGGTTTAAGCCAAGGTACTGCACATTTTTTTCCCTTAGTATCTTTAATTCACACACTAACTTA TTTTCCAGATTGAAAGTTTTCTCACTGATCTTATGATAAGACATGATTAGATTATTGTATGTACTTTTATATCATGCTCA TAATTGAAGTTCTCATCAATATAAGACTTCTAATTTTTAATTTCATCACTTTCTTAGTTGCAAAATGAAGCGGAAATTTT GGTTTTCTTCCGTGAGAACAAGTGCTTGTGTGTGTTTGTTTATCCATTGCGTTGAATGTGATTGTGTTTTTTCTCAATCC AACAACTTTGATCAATTGGATAAACTGTTTTGGAAAGCCAAATATATCAGTTGAATGTGCTTTCAACCGGAAGGCAAACA CACTCGTTGTCATTTCAAGTTAGTGCTAAGATCACGATCGACTACTTCGAGAACAAATTCTCATAATCAAGAATAAACAA TCATTACAGTTGTCATTAAACTGAATTGGATATTGTGGTAAAAGTGAAGCATAGTAGGAATTTCAAGAGAGTGATGGGTA ATTGAGATTGCTAGTGCTGAATTTGAAAAGGGACTTTGAAGTCCTAAGCATGCAAGAGGACTAAACCATCTCCAAGTAAT CTGAAAGAGCTTTTTGGATTGTAAATAAGATCAGGTTACTTGGGGAACATTTCTTGTAACACTTTTTAGAGAAGTTTGAA TCCACTACACCACTTGCTGAAGTGATGCATATATCATATATGCTCTACAAGTACAAAAACAAAGAAGGTCCTTGAAACAA AACAGAGTCTTTTATGGTGCTTTTGAAGCACAAAACCAATCAACTAAGAAAGGAAGATATGGGGGAAGTAGCTGTCAAAA CAATTCAAATTAGAGTAAGAATCTTCCTTGCAAAAAATCCATGGAATCAATCTAGAATCTAGATCCTATCATTTCTTTAC TTATTCACTAGATAAACAAATTTGAAAATGACACCAAATCCGTATTTTGATCCAATATTTACTAGCTCAACATACTGCTT TGCATTGTGTTCTGTCATGTAAAGATGTTATGTACTTAAATCCCACACTTCTTTTATTTTATTTGAAGAAACATGTTTTA ATATTTACAGGAGAGAAAGAATACTATGAAAGACAATTTGCTACTCTAAAATCATTTGAGGAAGTTGACTCCATAATGAC CTCGGACTCCATTGATGTAGAAGACATTGAAAAACAGGCTCAACATGAACGAGCAATGAAGATTTCTAATTATGCAAATG CAGTTTTACTGGTATTAAAGGTAATATTCCATTACATGTTTATTTTCATTTATGATTTATCAATGAAACTCCAAAGAGTT ATTCTTACTAGAAGGCATATTCTGAATATCTTCTTAAGTAGCCAACAATTTCAAATTCCATTAGCTATGAACCTATATAT AAGGTTTTAATAGGATTCTCATTCACTCAAACTAGCGAATTTCATGTGAAGCATTTCATCATAAGCTTCCTTAATGTTTG TTGTGGTACTGGTATGTGTAGATTTATGTGATGATAAGGACTGGATCGATGGCTGTCGCGGCATCGACATTGGATTCTCT GCTTGACTTCATGGCTGGTGGCATTCTTTGGTTCACTCACCTTGCAATGAAGAACATAAACATGTATAAATACCCTATTG GAAAGTTGAGGATGCAGCCAGTGGGCATAATCGTCTTTGCAGCTGTCATGGCAACACTTGGTGTGTCTAACTTACTTATC CTCTTCCTTGCTTTCAAAATTGTTCAGTTTTTGTTACTTTAATGTCATCATGAAAAATAATTTCCCTTCTCCTATGAAGT GAATGCAACAAAAGTAGTTTACATTTAATTAATGTCTTCATCAATATTTTGTTTTCTCTTTTTACTTAAATAAATAACAT CTAATCCATTTTACCACAGGTTTTCAGGTATTAACCACTGCTGTAGAACAACTAATTGAAAATAATCCTTCAGAGAAGAT GTCTTATGATCAACTAGTATGGTTGTACACTATTATGGTGTTTGCAACAGTGGTGAAGCTTGCACTCTGGTTTTATTGCA GAAGCTCAGGAAACAAGATTGTTCGCGCCTATGCAGATGTAAGGATTTCTTCTCTTCACACAAATGGCTTGATTAGTTTA GTGCATGTCTAGAAACTCGTTCAAAAACTATAGTGAAGCTAAAATAATGATGGGCAAAAGCAACTTCCTTTAGCTTTTGC TTCTGCCCGTTATGATTTTGGATTCACTGTGGTTTTCGAACGAGTTTCCAAACATCCAGATGCAGTTCCACACCATCTCT TACATATGCCACCCAGCAGGATCACCACTTTGATGTTGTAACAAATGTGGTTGGATTAGTTGCGGCTGTTCTTGGCGATA GATTTTACTGGTGGATTGACCCTGTTGGTGCTATTTTACTTGCAATTTATACTATCAAAAATTGGTCTGCCACTGTTATG GAAAATGCAGGTAATTCATTTATCAAATTTCTTAATAGTTAAATTATGAAAGAAGCATGCCTTTCAAACTATAAAATGAT CATTGTTATCAAGAAGACTCAATAGCCACCTACCTAGTCTTTTGTTGGGACTTGAGATGATAATTCAGTGTTTTCAAGAA GCACAAGCCATGTCTATGAAATCCTAAATTCACACGGTCAAGAAATTTGAGTCATTCAATCAGACAACTCCGATTTTGAG TTTATCCGAGCTGTCTGGTCTTGCCTACTAGTCATCGGATTTTGATCAAACGCAGTTAAAATTACTTGAATGCGTGAATT TAGGATTTTTCTAACTACAGTGAACCCAAAATCACCTTTTTATTTTCTCCTCAGAAGATCCATTAGACAGATCTCCAAAC ACATCAAAGGTGTTATATCGTAAGGAGTACTGAAAATGCCCTGATTTTAGTCTAAATAATGGGAAAATAGTTTGATGGAA TTGGTTAGCTTTGAGCTTCATAATTTGTAATGACCAAAAGAATAAAATCTCTGTAGTGTATGTAAAGAGTGTTATGCATA ATCTTTTTGTTGACAACATTGTATTGTATGGTGCAGTTTCACTAGTGGGACAATCTGCACCTCCTGAAGTTCTGCAGAAG CTGACTTATCTTGTCATAATGCACTCTCAAATTAAGCGCATTGATACTGTCCGCGCTTACACATTTGGTGTTCTGTATTT TGTGGAGGTTGACATTGAACTGGCAAAGAATTTACCTTTAAGAGAAGCACATAACATTGGAGAGAGCATACAGATAATGC TGGAGAAGCTTCCAGAAGTTGAGAGGGCATTTGTTCATCTGGACTTCGAATGTGATCACAAACCAGAGCACTCTGTTCTT ACCAAACTGCCAGATAGTCAACCTTAAGTACAATTGAAGTCCATTTATATATTTATGTGACACATTAAATTTGTCTATAA CTCAGCCTTCATTTTATGGTTTTTGTGGACCAAAAAGAAAAAGAAAAAAAACACTTCTAATATGGTTTGTTCATAAAGAA CAAAAGTTCATGCAGTGTTAAAAGTTGTGTTCATATATGGAAATCTCAATATATCTCACATAAGCATACAATGCTGGATA GATAAGGCAACCGTGTTGTTGATAGACGGATCCAGAAATTTAATGTAGTGAGGGCAAAATATACATATAAATTCATAACA AAAAAATTAATATGTACTATTAGAAGTGAGTCATTTTTTATTAAAGGGGACACAAGTGAAAGCATTTTTTACCAAATGGG TCATCAGAAACCACATACTTTTACTACTCAAGTGAGGGCATTTAGCAATGTGGGGCACAAGTGAAGACATTTAGCAATGT GAGACACAAGTGAGGGCATTTAGCAATGTGAAACATAAGTGAAGACATTTTTTTTATCAAAGGAGCCATAAAAAACCACA TACTTTTACCCCTCAATTTTTTTTCTAATGTTTTTTCTAAAATTAAGTGAGGG
CDS sequence (LotjaGi1g1v0104000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAGGATTCGGGTTCCGGGCCTCTACTGAGGAACCAGAACTCTTTTAACTTGCTTACAACCACTTTCTTATCCAA CTTGCCCCATAAGCTCCGTTCTTGCCTCGATTCTGAGTCTCCCTTTGACTCCAACCTTCATGTCTCTACTACCACCAACG GTTTAAGCCAAGGAGAGAAAGAATACTATGAAAGACAATTTGCTACTCTAAAATCATTTGAGGAAGTTGACTCCATAATG ACCTCGGACTCCATTGATGTAGAAGACATTGAAAAACAGGCTCAACATGAACGAGCAATGAAGATTTCTAATTATGCAAA TGCAGTTTTACTGGTATTAAAGATTTATGTGATGATAAGGACTGGATCGATGGCTGTCGCGGCATCGACATTGGATTCTC TGCTTGACTTCATGGCTGGTGGCATTCTTTGGTTCACTCACCTTGCAATGAAGAACATAAACATGTATAAATACCCTATT GGAAAGTTGAGGATGCAGCCAGTGGGCATAATCGTCTTTGCAGCTGTCATGGCAACACTTGGTTTTCAGGTATTAACCAC TGCTGTAGAACAACTAATTGAAAATAATCCTTCAGAGAAGATGTCTTATGATCAACTAGTATGGTTGTACACTATTATGG TGTTTGCAACAGTGGTGAAGCTTGCACTCTGGTTTTATTGCAGAAGCTCAGGAAACAAGATTGTTCGCGCCTATGCAGAT GATCACCACTTTGATGTTGTAACAAATGTGGTTGGATTAGTTGCGGCTGTTCTTGGCGATAGATTTTACTGGTGGATTGA CCCTGTTGGTGCTATTTTACTTGCAATTTATACTATCAAAAATTGGTCTGCCACTGTTATGGAAAATGCAGTTTCACTAG TGGGACAATCTGCACCTCCTGAAGTTCTGCAGAAGCTGACTTATCTTGTCATAATGCACTCTCAAATTAAGCGCATTGAT ACTGTCCGCGCTTACACATTTGGTGTTCTGTATTTTGTGGAGGTTGACATTGAACTGGCAAAGAATTTACCTTTAAGAGA AGCACATAACATTGGAGAGAGCATACAGATAATGCTGGAGAAGCTTCCAGAAGTTGAGAGGGCATTTGTTCATCTGGACT TCGAATGTGATCACAAACCAGAGCACTCTGTTCTTACCAAACTGCCAGATAGTCAACCTTAA
Protein sequence (LotjaGi1g1v0104000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEDSGSGPLLRNQNSFNLLTTTFLSNLPHKLRSCLDSESPFDSNLHVSTTTNGLSQGEKEYYERQFATLKSFEEVDSIM TSDSIDVEDIEKQAQHERAMKISNYANAVLLVLKIYVMIRTGSMAVAASTLDSLLDFMAGGILWFTHLAMKNINMYKYPI GKLRMQPVGIIVFAAVMATLGFQVLTTAVEQLIENNPSEKMSYDQLVWLYTIMVFATVVKLALWFYCRSSGNKIVRAYAD DHHFDVVTNVVGLVAAVLGDRFYWWIDPVGAILLAIYTIKNWSATVMENAVSLVGQSAPPEVLQKLTYLVIMHSQIKRID TVRAYTFGVLYFVEVDIELAKNLPLREAHNIGESIQIMLEKLPEVERAFVHLDFECDHKPEHSVLTKLPDSQP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 389 | 389 | 2.8E-237 | – | |
| PANTHER | 1 | 389 | 389 | 2.8E-237 | – | |
| Phobius | 1 | 101 | 101 | - | – | |
| SUPERFAMILY | 95 | 295 | 201 | 9.02E-39 | ||
| Gene3D | 96 | 294 | 199 | 7.7E-27 | ||
| TIGRFAM | 97 | 373 | 277 | 9.7E-31 | ||
| TMHMM | 102 | 119 | 18 | - | – | |
| Pfam | 102 | 294 | 193 | 2.0E-27 | ||
| Phobius | 102 | 119 | 18 | - | – | |
| Phobius | 120 | 124 | 5 | - | – | |
| Phobius | 125 | 146 | 22 | - | – | |
| TMHMM | 134 | 156 | 23 | - | – | |
| Phobius | 147 | 166 | 20 | - | – | |
| Phobius | 167 | 186 | 20 | - | – | |
| TMHMM | 168 | 190 | 23 | - | – | |
| Phobius | 187 | 205 | 19 | - | – | |
| TMHMM | 205 | 227 | 23 | - | – | |
| Phobius | 206 | 226 | 21 | - | – | |
| Phobius | 227 | 393 | 167 | - | – | |
| Gene3D | 296 | 374 | 79 | 7.2E-10 | ||
| SUPERFAMILY | 297 | 375 | 79 | 5.23E-14 | ||
| Pfam | 299 | 373 | 75 | 2.0E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0104000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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