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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0120600 |
| Transcript ID | LotjaGi1g1v0120600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar cation/proton exchanger, putative; TAIR: AT2G38170.1 cation exchanger 1; Swiss-Prot: sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1; TrEMBL-Plants: tr|I1JHC6|I1JHC6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0120600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:19025837..19030461) extracted from Lotus japonicus Gifu genome v1.2.
TATAACACAACTAATTGAACTTGTTTTTTATCCTACACATTTAAACTCAGTACACACTTCACCACCCAAAGAGAGAAAAA GAAAGAAACTCTGAGTTTTGACACTCTTGAATGCACACTAACACATCAGGAGCAATGCCAGTGTCAGTAGTGTCTCCCTC ACCCTCCATGAATGAAGATTTGGAGAGCAACACTACCAATGAAGAGACATCTCATGAGAACTTGTCACGTTCAATGGTGA AGAGATCAGATTCCGTTCTTGTTACAAACAATATTAACGCTCGTTTCCAAATGCTTAGGATTTTCATGACCAATTTGCGA GTCGTATTACTTGGGACTAAGCTTGTTGTGCTTTTTCCGGCGGTCCCTTTAGCCGTTGCTGCAGATTTCTATAAATTTGG AAGGGTAAGCATCATCTACAAAATTTCCTGTTAATTATGACTAGACACTCATTTTACACATCGCAGTGGTTAAAAGTGTT TGTTTAAATCTTAAGGTTAAATATTTGATTTTTATGAGACGCATTTAACGTTTATCACACTCAAATTGAATATGATTGTC TCAATCGAGAATACTCAACCTGGACTAAATAGGCTAAAGTTAAGTTAAGCTATATTCACACATGTAATGTCACTTCTTCC TGATTTTGGATGTGACACATTACCAATAAACGTTCAAAAATTTAGCTTCTATCTAATTTTTTTCATAAATATTCATAAAG TTTCATTTATTTATAACAAGTGTAACCTCTTTATGAGAAGTTTTAAAATATTATATACTTCTTTTCCCCATAATTTTCAC ACCAGATCAATGATGTATGAATTTCTATTGATAATTTTTGTTGTTTGGTTAAGGAATACACATCATTAATAATTAGAAAT GTAAGTTTCAAAAAAAAAATTGTAGGTGAAACACAAAATTAAAAAAATTTAATAATATATATGGATTCTTAACTTATTTT TAAAAAAAAAATCTTTTTTTTTCCTGCCACGCAGCCATGGATTTTTGCTTTCAGCCTGCTTGGACTAGCACCTTTAGCTG AACGTGTCAGCTTCTTGACTGAGTAAGTTTACATGTCACACCTCCTAACTCAATGAAGCCACCACAATTTATATATGACT TTTCTTCATATTATGACAAAAATTACATACATTTTCTAACTTTTTTCATTTAATTTTTTGCCCTAAAAAACTTAACCTCG ACCCTGTGAACTTCAAGGCAAATTGCATACTTCACCGGTCCAACAGGTACCATAATTTTGATAAAGCTAAATTAACTCTA TTAATTAAAAATTGGCTAAATAATTTAGTTATTTAGTTCATCAGAAAACCAATTTGATTTTGGTTTTGGTTTGTGTGAAT GTTTCAGTCGGAGGGCTTCTGAATGCAACATGTGGTAATGCAACCGAGATGATCATAGCAATATTAGCACTTCGCAAGAA CAAAGTAAATGTTGTCAAGTTCTCTCTGCTGGGTTCAGTTCTCTCAAACCTTCTCTTGGTTCTTGGTAGCTCACTCCTCT GTGGTGGCTTGGCTAACCTTAAGAGGGAACAGAGATATGACAGAGTAAATATCACATTTTATTTGTTTACAAAGTCTGCT ATATATATTAATCAATCAATATTTTGTTTCTTAAGTAAGTGGTTGATGGTTCGAATCTCACTCTTGTGAATGGAAAAAAA ACTCATTGGTCAGCTCCTACATACATTAACTTGTGAATGGAAAAAAAATTCATTGGTCAGCTCCTACATACATTAACTGT GGAGTGAGAGATTAGTCTCACGGCTATCAGTTGTGGAGATACCTTGGCCGATAACAAAAAAAAATGTTCACATGTATATA AGGCGATTAACATAGACATATCAGACACCCTTTAGACATATCACTTTGCGGCACACTCTTTAGATATACCTCTTTCGCAG CGGCTTAACCCTATAACATTTTGTCGCGAAACCACCCCAAAGGGTATGTTTGAATCTTGACATCACGTTGTCATATTGAA ATTTGCATCTATTTTTTTATTTAAAAGGTGGGTCTCTCTATATATTTATGAATAGAAATAGATATGATGTTTCACTTAAC GTTATCATATCACGACATGAGAAGGACCCTAATCCACTGATTACTCTTAATTCTTGGGAAAATGTTGGGTAGATACTTAA TGAGTGTCGTTCGCCAGAGTGAGAAAAGAAGATAAGAGAGAAGTAATGAATGTGATATATGATGTGACGTGATAAGAAGA AATAGATTAGAGAGAATGTTGTTGTGTAGTGTATGTAATGTTTTAGTGTCTACAAATCTTCACTCTAATTTTTGTGCTAA TCAATTTTTTTGTTATTTAATTATTGAATGAACAGAAACAAGCAGATGTAAATTCATTGCTTTTGTTGCTGGGATTGCTA TGTCATTTGCTGCCATTATTGTTCAAATACTCCTTGGCAGGGGGTGATTACTCTATAGCCACTTCTACTCTGCAATTGTC AAGAGCAAGCAGCATTGTTATGCTTCTAGCATATGTTGCATATATCTTCTTCCAATTGAAAACTCATCGGCGATTGTTTG ATGCACAAGAGGTGATCATTGATATATAATTTGATATTTAATTAAGCACAAATTGTGATATGAGTTTCAATTTGGCTACA TTTATTTAGCTTTCATAGTTTCTGTAAATTAAAGATGCATGTAACAAAAAAATTCTGTAATCTGCAATTACCACAAAATT GGGTTTGACCGTTTGATCTTCAGGAGGAAGATGATGAAGAGAAGGCTGTCATTGGATTTTGGAGTGCATTTACCTGGTTG GTGGGTATGACACTGGTCATATCTTTGCTCTCTGAATATGTTGTTGGAACCATTGAGGTATATGTGTGTATAATTTGCAA TTATATGATTCTTGTCATTGTGAACTATGAAATTTCAATGTCATGAACTAAGCATAAATAATGAGTTATCTGTCATTTTC TGCTTAACTAGGCTGCATCAGATTCTTGGGGAATTTCTGTTAGCTTCATTAGTATAATTTTGCTACCAATTGTTGGGAAT GCTGCAGAACATGCTGGTTCAATTATATTTGCTTTTAAGAACAAGCTGGTATGGTTTGTCAATTATATTGTTGCAGTAGA AATATCAATTTATCTATAGCCTTATGTTTATTAATTTAATTGAATGTGGCTCATTACTATCATACAGGACATATCCTTGG GTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTAAGGATGAATTAGTTGATCTGGTTTGGCTGCGATCAA ATTTTGACACTGTAAATGCAGTAAGGAGACCTCGGTCGTAGGATGAAGATCGGACAATTCTGATTTCAGTGTAAATACTT ATATGTAAACCATGTTCTCAAAATCTGAGTCACGACCAAGATTCCTTAACTGCAGTGACTGCACAAAAAACTGACTGCAT AGAATTCATTTCCACCACTAATTACATAAATACTTTCCACCATATTTTTTTCCTAACACCAATAATTTTTCTTTTCTCTA TTAATGAATTTCAGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGTATAAAAATGGATCTGGACTTTAATCTTCTT GAGACTGGATGTCTTGCTTTTGCCATTATTGTTACAGCTTTCACTTTACAGGTATGCAATATATAGCATTTTCTCTGTTC TCTGTTCTCTTTCTATTTTCTGTTTTTTCTTTTATTGTTATTACTAATGTTATTTTTTGTTACTCTTGTAGGATGGAACT TCACACTACATGAAAGGAGTGGTTCTTACTCTCTGCTACCTTGTCATTGCTGCATGTTTTTTTGTTAACAAAACTGCTCA AATTAGTAAGTAATTTCCTATCTATCTCAAGTCATATAGTAACTTCAAGTTATTCATGTATTTTCGTGTGTTTGGAAACA CACACATCCTGACGCATCAATGGAGAAGTCAGATTTTGTCACATTTGACTCAAATGTGGATTGTTGTTTAGTTCAACGGA CATCCAAACATACACTTATTTTATGCTTTCCAAGTTGTAGCGCAAAATTAGATACACATCTAATTTATAACAAAAAATAG ACCTCAGATGCTCTTCTTTTTTCAGTTTAGTGTTTTAGATCAAGTTATTCTATTAATTTGATATTGTTTTTTTTTTAATG TTACAGACCAACATCCTAGGACCAGCTTTGGAGCTAAACCATCTTTTGAAGCTATCCCCATTTGAATTACTTTGTTTCCC CATGCTGAGAAAAGCAAACTGACCCAATGGGATACCTGAAATTCCTATGAAACTTACAAAATTGGATTTTATTTTCTTGG TGAAACTTCTGTGCCTTTGAAACTGAGGCTTTGGGACCAGTCATAAACTATTACAAATAGAGATTTCAATGCTTTCTGTA ATTCTTTCTTCACAATAAGGCTGTACAATGACATTTTAGGTTTATAACGATGCCTATGTTCTTTTTTCATTTGTTTTACT TCTTCCCACTATACATATCCTCAATATTCTTAATTCATGTATAACACTTTCATGTAGCAACAAATAAGAATTTCCAATTG CATTATTCGATGTAAGCAGAAAGGAACTATAAACTGTGTTTTAGTGAAAATCTTGTCCAATTTCC
CDS sequence (LotjaGi1g1v0120600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACACTAACACATCAGGAGCAATGCCAGTGTCAGTAGTGTCTCCCTCACCCTCCATGAATGAAGATTTGGAGAGCAA CACTACCAATGAAGAGACATCTCATGAGAACTTGTCACGTTCAATGGTGAAGAGATCAGATTCCGTTCTTGTTACAAACA ATATTAACGCTCGTTTCCAAATGCTTAGGATTTTCATGACCAATTTGCGAGTCGTATTACTTGGGACTAAGCTTGTTGTG CTTTTTCCGGCGGTCCCTTTAGCCGTTGCTGCAGATTTCTATAAATTTGGAAGGCCATGGATTTTTGCTTTCAGCCTGCT TGGACTAGCACCTTTAGCTGAACGTGTCAGCTTCTTGACTGAGCAAATTGCATACTTCACCGGTCCAACAGTCGGAGGGC TTCTGAATGCAACATGTGGTAATGCAACCGAGATGATCATAGCAATATTAGCACTTCGCAAGAACAAAGTAAATGTTGTC AAGTTCTCTCTGCTGGGTTCAGTTCTCTCAAACCTTCTCTTGGTTCTTGGTAGCTCACTCCTCTGTGGTGGCTTGGCTAA CCTTAAGAGGGAACAGAGATATGACAGAAAACAAGCAGATGTAAATTCATTGCTTTTGTTGCTGGGATTGCTATGTCATT TGCTGCCATTATTGTTCAAATACTCCTTGGCAGGGGGTGATTACTCTATAGCCACTTCTACTCTGCAATTGTCAAGAGCA AGCAGCATTGTTATGCTTCTAGCATATGTTGCATATATCTTCTTCCAATTGAAAACTCATCGGCGATTGTTTGATGCACA AGAGGAGGAAGATGATGAAGAGAAGGCTGTCATTGGATTTTGGAGTGCATTTACCTGGTTGGTGGGTATGACACTGGTCA TATCTTTGCTCTCTGAATATGTTGTTGGAACCATTGAGGCTGCATCAGATTCTTGGGGAATTTCTGTTAGCTTCATTAGT ATAATTTTGCTACCAATTGTTGGGAATGCTGCAGAACATGCTGGTTCAATTATATTTGCTTTTAAGAACAAGCTGGACAT ATCCTTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAA TGGGTATAAAAATGGATCTGGACTTTAATCTTCTTGAGACTGGATGTCTTGCTTTTGCCATTATTGTTACAGCTTTCACT TTACAGGATGGAACTTCACACTACATGAAAGGAGTGGTTCTTACTCTCTGCTACCTTGTCATTGCTGCATGTTTTTTTGT TAACAAAACTGCTCAAATTAACCAACATCCTAGGACCAGCTTTGGAGCTAAACCATCTTTTGAAGCTATCCCCATTTGA
Protein sequence (LotjaGi1g1v0120600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHTNTSGAMPVSVVSPSPSMNEDLESNTTNEETSHENLSRSMVKRSDSVLVTNNINARFQMLRIFMTNLRVVLLGTKLVV LFPAVPLAVAADFYKFGRPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIAILALRKNKVNVV KFSLLGSVLSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFKYSLAGGDYSIATSTLQLSRA SSIVMLLAYVAYIFFQLKTHRRLFDAQEEEDDEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFIS IILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIKMDLDFNLLETGCLAFAIIVTAFT LQDGTSHYMKGVVLTLCYLVIAACFFVNKTAQINQHPRTSFGAKPSFEAIPI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 40 | 40 | - | – | |
| Phobius | 1 | 70 | 70 | - | – | |
| MobiDBLite | 1 | 36 | 36 | - | – | |
| PANTHER | 20 | 436 | 417 | 1.9E-223 | – | |
| PANTHER | 20 | 436 | 417 | 1.9E-223 | – | |
| TIGRFAM | 65 | 426 | 362 | 3.1E-141 | ||
| TMHMM | 68 | 90 | 23 | - | – | |
| Phobius | 71 | 94 | 24 | - | – | |
| TIGRFAM | 83 | 426 | 344 | 2.3E-96 | ||
| Phobius | 95 | 99 | 5 | - | – | |
| Pfam | 100 | 257 | 158 | 3.7E-22 | ||
| Phobius | 100 | 119 | 20 | - | – | |
| TMHMM | 100 | 119 | 20 | - | – | |
| Phobius | 120 | 130 | 11 | - | – | |
| Gene3D | 130 | 419 | 290 | 2.8E-23 | – | |
| Phobius | 131 | 152 | 22 | - | – | |
| TMHMM | 132 | 151 | 20 | - | – | |
| Phobius | 153 | 163 | 11 | - | – | |
| Phobius | 164 | 188 | 25 | - | – | |
| TMHMM | 166 | 188 | 23 | - | – | |
| Phobius | 189 | 199 | 11 | - | – | |
| Phobius | 200 | 219 | 20 | - | – | |
| TMHMM | 201 | 223 | 23 | - | – | |
| Phobius | 220 | 238 | 19 | - | – | |
| TMHMM | 238 | 255 | 18 | - | – | |
| Phobius | 239 | 255 | 17 | - | – | |
| Phobius | 256 | 275 | 20 | - | – | |
| Gene3D | 270 | 315 | 46 | 2.8E-23 | – | |
| Phobius | 276 | 297 | 22 | - | – | |
| TMHMM | 276 | 298 | 23 | - | – | |
| Pfam | 283 | 425 | 143 | 9.2E-18 | ||
| Phobius | 298 | 311 | 14 | - | – | |
| Phobius | 312 | 331 | 20 | - | – | |
| Phobius | 332 | 350 | 19 | - | – | |
| Phobius | 351 | 376 | 26 | - | – | |
| TMHMM | 351 | 373 | 23 | - | – | |
| Phobius | 377 | 381 | 5 | - | – | |
| Phobius | 382 | 401 | 20 | - | – | |
| TMHMM | 382 | 401 | 20 | - | – | |
| Phobius | 402 | 407 | 6 | - | – | |
| Phobius | 408 | 428 | 21 | - | – | |
| TMHMM | 411 | 428 | 18 | - | – | |
| Phobius | 429 | 452 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Calcium ion transport | The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Molecular function | Calcium:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + H+(out) = Ca2+(out) + H+(in). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0120600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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