Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

G3DSA:1.20.58.1130

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0120600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vacuolar cation/proton exchanger, putative; TAIR: AT2G38170.1 cation exchanger 1; Swiss-Prot: sp\|Q39253\|CAX1_ARATH Vacuolar cation/proton exchanger 1; TrEMBL-Plants: tr\|I1JHC6\|I1JHC6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0120600	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR004713 IPR004798 IPR004837 NON_CYTOPLASMIC_DOMAIN PF01699 PTHR31503 PTHR31503:SF42 TIGR00378 TIGR00846 TMhelix TRANSMEMBRANE mobidb-lite	15
LotjaGi1g1v0120600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vacuolar cation/proton exchanger, putative; TAIR: AT2G38170.3 cation exchanger 1; Swiss-Prot: sp\|Q39253\|CAX1_ARATH Vacuolar cation/proton exchanger 1; TrEMBL-Plants: tr\|I1JHC6\|I1JHC6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0120600	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR004713 IPR004798 IPR004837 NON_CYTOPLASMIC_DOMAIN PF01699 PTHR31503 PTHR31503:SF42 TIGR00378 TIGR00846 TMhelix TRANSMEMBRANE mobidb-lite	15
LotjaGi1g1v0440900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vacuolar cation/proton exchanger, putative; TAIR: AT3G51860.1 cation exchanger 3; Swiss-Prot: sp\|Q93Z81\|CAX3_ARATH Vacuolar cation/proton exchanger 3; TrEMBL-Plants: tr\|I1KKE4\|I1KKE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0440900	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR004713 IPR004798 IPR004837 NON_CYTOPLASMIC_DOMAIN PF01699 PTHR31503 PTHR31503:SF50 TIGR00378 TIGR00846 TMhelix TRANSMEMBRANE	14
LotjaGi1g1v0648400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cation calcium exchanger; TAIR: AT5G17860.1 calcium exchanger 7; Swiss-Prot: sp\|Q9FKP1\|CCX1_ARATH Cation/calcium exchanger 1; TrEMBL-Plants: tr\|I1N8E0\|I1N8E0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0648400	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR004837 NON_CYTOPLASMIC_DOMAIN PF01699 PTHR12266 PTHR12266:SF12 TMhelix TRANSMEMBRANE	10
LotjaGi2g1v0110900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cation calcium exchanger; TAIR: AT5G17850.1 Sodium/calcium exchanger family protein; Swiss-Prot: sp\|Q9FKP2\|CCX2_ARATH Cation/calcium exchanger 2; TrEMBL-Plants: tr\|A0A072U845\|A0A072U845_MEDTR Cation calcium exchanger; Found in the gene: LotjaGi2g1v0110900	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR004837 NON_CYTOPLASMIC_DOMAIN PF01699 PTHR12266 PTHR12266:SF20 TMhelix TRANSMEMBRANE	10
LotjaGi3g1v0002000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vacuolar cation/proton exchanger, putative; TAIR: AT3G13320.1 cation exchanger 2; Swiss-Prot: sp\|Q5KQN0\|CAX2_ORYSJ Vacuolar cation/proton exchanger 2; TrEMBL-Plants: tr\|A0A151S6K9\|A0A151S6K9_CAJCA Vacuolar cation/proton exchanger 2; Found in the gene: LotjaGi3g1v0002000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR004713 IPR004798 IPR004837 NON_CYTOPLASMIC_DOMAIN PF01699 PTHR31503 PTHR31503:SF54 TIGR00378 TIGR00846 TMhelix TRANSMEMBRANE	14
LotjaGi3g1v0002000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vacuolar cation/proton exchanger, putative; TAIR: AT3G13320.1 cation exchanger 2; Swiss-Prot: sp\|Q5KQN0\|CAX2_ORYSJ Vacuolar cation/proton exchanger 2; TrEMBL-Plants: tr\|A0A151S6K9\|A0A151S6K9_CAJCA Vacuolar cation/proton exchanger 2; Found in the gene: LotjaGi3g1v0002000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR004713 IPR004798 IPR004837 NON_CYTOPLASMIC_DOMAIN PF01699 PTHR31503 PTHR31503:SF54 TIGR00378 TIGR00846 TMhelix TRANSMEMBRANE	14
LotjaGi3g1v0002000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vacuolar cation/proton exchanger, putative; TAIR: AT3G13320.1 cation exchanger 2; Swiss-Prot: sp\|Q5KQN0\|CAX2_ORYSJ Vacuolar cation/proton exchanger 2; TrEMBL-Plants: tr\|A0A151S6K9\|A0A151S6K9_CAJCA Vacuolar cation/proton exchanger 2; Found in the gene: LotjaGi3g1v0002000	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR004713 IPR004798 IPR004837 NON_CYTOPLASMIC_DOMAIN PF01699 PTHR31503 PTHR31503:SF54 TIGR00378 TIGR00846 TMhelix TRANSMEMBRANE	14
LotjaGi3g1v0154800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Calcium binding family protein; TAIR: AT1G53210.1 sodium/calcium exchanger family protein / calcium-binding EF hand family protein; Swiss-Prot: sp\|Q9N1R0\|CABP1_BOVIN Calcium-binding protein 1; TrEMBL-Plants: tr\|K7M290\|K7M290_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0154800	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.238.10 G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR002048 IPR004837 IPR011992 IPR018247 IPR039647 NON_CYTOPLASMIC_DOMAIN PF01699 PF13499 PF13833 PS00018 PS50222 PTHR10891 PTHR10891:SF750 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00054 SSF47473 SignalP-noTM TMhelix TRANSMEMBRANE cd00051	27
LotjaGi6g1v0137700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vacuolar cation/proton exchanger, putative; TAIR: AT1G55730.1 cation exchanger 5; Swiss-Prot: sp\|Q8L783\|CAX5_ARATH Vacuolar cation/proton exchanger 5; TrEMBL-Plants: tr\|K7LAF5\|K7LAF5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0137700	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR004713 IPR004798 IPR004837 NON_CYTOPLASMIC_DOMAIN PF01699 PTHR31503 PTHR31503:SF48 TIGR00378 TIGR00846 TMhelix TRANSMEMBRANE	14
LotjaGi6g1v0137700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Vacuolar cation/proton exchanger, putative; TAIR: AT1G55730.1 cation exchanger 5; Swiss-Prot: sp\|Q8L783\|CAX5_ARATH Vacuolar cation/proton exchanger 5; TrEMBL-Plants: tr\|K7LAF5\|K7LAF5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0137700	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1420.30 G3DSA:1.20.58.1130 IPR004713 IPR004798 IPR004837 NON_CYTOPLASMIC_DOMAIN PF01699 PTHR31503 PTHR31503:SF48 TIGR00378 TIGR00846 TMhelix TRANSMEMBRANE	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	9.09