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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0123500 |
| Transcript ID | LotjaGi1g1v0123500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter, putative; TAIR: AT3G54140.1 peptide transporter 1; Swiss-Prot: sp|Q9M390|PTR1_ARATH Protein NRT1/ PTR FAMILY 8.1; TrEMBL-Plants: tr|A0A1J7FVJ9|A0A1J7FVJ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0123500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:19602248..19606206) extracted from Lotus japonicus Gifu genome v1.2.
CATGAGTGCATTAAATTATTTTCAGAAGATGATAATAAATAGCTGTCACTAGAATAATGTTTACATTAAGTACAAACAAA AGGTTGTTCATTTCTAACGTTCTTAGCATTGTTTGAAACCTTATCAGTTTTTCAAACAGACACTAAATAAGAATGGCCAA GGATGCTGTTTACGCAAAAGATGGAACCATAGATTACCTGGGAAACCCAGCTAAGAAAAGGAAAACTGGAACCTGGACAG CCTGCTACTTCATTTTAGGTATATATTGTGTATCTTCAACCCCCAACTATGTTTTTTTGGTTATTGTTAATTAAGAAACA CTTGTCTAATTCACAGGACATGAATTTTGTGAGAGATTCACTTACTATGGAATGAGCACAAATTTGGTGCTTTATTTTAA GCATCAACTGCATCAGCATAGTGCCACTGCTTCCAAGAATGTTGCTGATTGGGGTGGAACATGCTACATCACTCCATTGA TTGGAGCACTTGTGGCTGATGCCTATCTTGGAAGATACTTGACCATCCTATACCTTTCAGTAGTTTATGTTATTGTGAGT ATGGTTCTTCAATCTGCACTTGATTGTTAGCTTGCCTGTGAATTAGATAGAATTTTGAAGATCCAATTGGGGGAAGAGAA AAAAAAACTTTTGTAAAGAAGGAAATCAATAAACTCGTCTATGCTTACAATAGCATACTCCGGTCTAAAGTCTGGATAAA GGAGGAAAGTTATGTTCAGGGCGGACTAAGATATTTAAAAAATGAGGCAGTCCCCCCTAAAAGAATTTTTTTCTTACTAA AAATGTTGTATTTCTCCCCTAAAAGTATTTGTGCAATCTTTTCTAAATGAAAGTTGATTTTACTTAATATGTTAAATTTC CGTCCCCTTACATATATTTTCTAGTTTTGTCGCTAGACTTGTGTTAGTTCTTTCGCAATCCACGTAAAACTAGCCAATAT CCTTAATATGGATTCAATGAGGCTCGTACTTGAGACCGCGAAAACAACATTTAAGTACTACTCTATTAAGACAAAAATTC TCTTGGGGTAGACCGCTCCTTTTACCTGCTATTTAGGTCTATCCCTAGTGATCCATATAACCGACCTCACCTAGTAGGAT GAGGCTTTTATAGTTGCTGTAAAGAAGAAAACCAATAATCTTGTGTTTAAAACTACAAAATCTTTCAATTTTGCATCAAA TTCTATCTTCATGATTGATAAATCTAAAAAAAGACTTTCTCTTCCTGGTAAGGGAATGGCACTTTTGACATTGTCTGCAT CAGTTCCTGGCCTAAAACCAACCTGCTATGGAAAAGATAATTGCCATGCCTCTCATGGACAGAGTGCAGTGTGCTTTCTA TCTCTTTACCTTATAGCTCTTGCCGCTGGAGGGATCAAGCCTTGCATTTCATCATTTGGTGCAGATCAGTTTGATGATGC TGATGAAGTTGAGAAGCAACACAAGAGCTCTTTCTTCAACTGGTTCTTTTTGTCAATCAACACTGGAGGCCTTATTGCTG CTTCTCTAATGGTATGGATACAAGACAATGTGAGTTGGGGATGGGGTTTCGGCATTCCAGCATTGGCCATGGCAGTTTCT GGGGTGAGTTTCTTTTCAGGTACGAGGTTGTATAGAAATCAGAAGCCAGGTGGAAGCCCCATCACTAGAATCTGTCAAGT GATAGTGGCATCCATTAGAAAATATGATGTTGAAGTACCTAATGATGAGTCTCTCTTGTATGAGACTAAAGATAAAGTGT CTGCAATCCAAGGAAGCCGCAAGCTAGACCATTCTAATGGATTAAGGTAAACCAGTGGCAACAAATTTTACCATGGCCAA TTTATTTTTGTTCCTCTTATTAAGAAATGTTTGCATTGCAAGATGCTCTCTTTTTAACACTATTAGTAGAGAGTGGATAC AAGTTATTTTAAATGAATTCATAAAGTTAGCGTTGAAAACAATGTTAGCATGTCTGAATCAATTTCTCTTTTCTCGGAAT AAATTCTAGTATCTTAGAAGCTACTCACAAACTTTTCTCCCGAAATGTTTTTGACTTTAGAATCAACCATAAAAGAATTT CCAAATAACCAAAGACGATTTTAATCTTACACTTAATTTCTAAGCATAGAAACGTAGTGCTTTGCCAAAATCAATTCAAT CCAAAATCAATTTTGACGAAGTTAATCCAAATACACACTAAATTGGCATTCTATTACCCAAAGATGGAGTTCTAAGACCA AATCCTAATACTAGGTTCTAGAGCCAAGAGACACTTATATATGGCAATTCCAACTCTAAGAATACCATCTTCACACATCC TTTAGGAATTGGTCAGTTTATTTTTGTAAATTCTTCTATAATTGATTCCAAGGCCAAAGTCAATTCTAGGAAAAAGTTAA CATGAGTAGCTTCAGGGAGCTAGAATTGATTTTGATAAAAGAGAAGTGGATTCCATCTTTGGGTACTAGGCTCAGTTCCC AGGATAAAAATGATCATTTTATAAATCTATAACCATTAGTTTTCATGAATGAAACAGCAATAAAAAATGTAAGTTTTAAC CTATTACACAAAACAAAATTTTAAGGCACAAAAATTAAAAAAGACAATGAAAGGTCCTTGTTGCATTATCTAGATTATAT TCACACTTTCTTCTTGTGGGCAACAGATTCTTTGACAAATCAGCAGTACCAGGAAATTCAGATAATGTGAAGGACTCAGT CAACCCATGGAGACTTTGCACTGTAACTCAAGTTGAAGAGCTGAAATCTGTCATAAGATTGCTTCCAATATGGGTCACTG GTATCATATTTGCTACTGTTTTTGGTCAAATGAGCAACTACTTTGTCTTGCAAGGGGAAACCATGGATACTAATGTGGGA AACTTGAAGTTTCAGATCCCACCAGCTTCTGTTTACATCTTTAACAACCTTGGTGTCATCTTTTGGGTCCCAGTGTATGA TAGGATCATTGTGCCAATAGCTAGGAAGTTCACTGGCCATAAAAATGGCCTAACTCAACTCCAGAGAATTGGCACTGGCC TCTTCATATCCATATTCTCTATGTTATATGCATCAACTCTGGAGACTGTAAGACTTGGGATGGTTAAAAGACACAAAATT TATGAACTTAAGGAGGTTCCCATGTCAATTTTCTGGCAGGTGCCACCATATTTTATTATAGGTTGTGCTGAAGTGTTCAC GTTCATTGGACAGTTGGAGTTCTTCTATGAGGAAGCCCCTGATGCCATGAGAAGTTTGTGTTCTGCTTTCTCACTCCTCA CTATTGGACTTGGACAATGTTTGAGTTCTCTGCTTGTGACCATTGTGATAAAGGTTACTACTAGGAATGGGAGTGCTGGT TGGTTACCTCACAATTTAAATTATGGTCACCTTGATTGGTTTTTCGGGCTATTGACAGTGTTGAGTGTACTGAATTTTGT TGTGTTCCTTGTAGTGTCTAAGTTTTACACATATAAAAGATTGGTTGGAACTCTCAGTTGAAAACAATTGTCCCAATGGT GTTCAAATTATGCAGTTTCTATATTATATGTCCTTATTGAATAAGTCCCAACTATTACTGCTTGCAAACATGGCTACGTT CCGTAAATATTCCTAATTAGTATGTGAGGGTTAAGTTGGTAAGGACGGACCACTTCTCCTCAAAAAGTTGTATGTTTAAT TTCCGCTGCCAATATAAAAATTGTGTTTGTAATCGACATATGGTACTAAAAGTATGTTTTGATCCGTGGTGGTGACCGGA GCTGAATTCACTCAAACTTTTACTACCTTAAAGAAAAACTAGATATCCATTATCCAATTAAGCTAACAATACAGCTTATA TTATGAAATCTAAATTAAACTGGAACCAGCTGTTTGGGTGATCTTCTTCGCAATTCAAAGAAAAGTTTTATTGATCTTAA CTTTGTTTTAGATAATAACTTGTATAAGTTGAAATCATG
CDS sequence (LotjaGi1g1v0123500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAGGATGCTGTTTACGCAAAAGATGGAACCATAGATTACCTGGGAAACCCAGCTAAGAAAAGGAAAACTGGAAC CTGGACAGCCTGCTACTTCATTTTAGGACATGAATTTTGTGAGAGATTCACTTACTATGGAATGAGCACAAATTTGGTGC TTTATTTTAAGCATCAACTGCATCAGCATAGTGCCACTGCTTCCAAGAATGTTGCTGATTGGGGTGGAACATGCTACATC ACTCCATTGATTGGAGCACTTGTGGCTGATGCCTATCTTGGAAGATACTTGACCATCCTATACCTTTCAGTAGTTTATGT TATTGGAATGGCACTTTTGACATTGTCTGCATCAGTTCCTGGCCTAAAACCAACCTGCTATGGAAAAGATAATTGCCATG CCTCTCATGGACAGAGTGCAGTGTGCTTTCTATCTCTTTACCTTATAGCTCTTGCCGCTGGAGGGATCAAGCCTTGCATT TCATCATTTGGTGCAGATCAGTTTGATGATGCTGATGAAGTTGAGAAGCAACACAAGAGCTCTTTCTTCAACTGGTTCTT TTTGTCAATCAACACTGGAGGCCTTATTGCTGCTTCTCTAATGGTATGGATACAAGACAATGTGAGTTGGGGATGGGGTT TCGGCATTCCAGCATTGGCCATGGCAGTTTCTGGGGTGAGTTTCTTTTCAGGTACGAGGTTGTATAGAAATCAGAAGCCA GGTGGAAGCCCCATCACTAGAATCTGTCAAGTGATAGTGGCATCCATTAGAAAATATGATGTTGAAGTACCTAATGATGA GTCTCTCTTGTATGAGACTAAAGATAAAGTGTCTGCAATCCAAGGAAGCCGCAAGCTAGACCATTCTAATGGATTAAGAT TCTTTGACAAATCAGCAGTACCAGGAAATTCAGATAATGTGAAGGACTCAGTCAACCCATGGAGACTTTGCACTGTAACT CAAGTTGAAGAGCTGAAATCTGTCATAAGATTGCTTCCAATATGGGTCACTGGTATCATATTTGCTACTGTTTTTGGTCA AATGAGCAACTACTTTGTCTTGCAAGGGGAAACCATGGATACTAATGTGGGAAACTTGAAGTTTCAGATCCCACCAGCTT CTGTTTACATCTTTAACAACCTTGGTGTCATCTTTTGGGTCCCAGTGTATGATAGGATCATTGTGCCAATAGCTAGGAAG TTCACTGGCCATAAAAATGGCCTAACTCAACTCCAGAGAATTGGCACTGGCCTCTTCATATCCATATTCTCTATGTTATA TGCATCAACTCTGGAGACTGTAAGACTTGGGATGGTTAAAAGACACAAAATTTATGAACTTAAGGAGGTTCCCATGTCAA TTTTCTGGCAGGTGCCACCATATTTTATTATAGGTTGTGCTGAAGTGTTCACGTTCATTGGACAGTTGGAGTTCTTCTAT GAGGAAGCCCCTGATGCCATGAGAAGTTTGTGTTCTGCTTTCTCACTCCTCACTATTGGACTTGGACAATGTTTGAGTTC TCTGCTTGTGACCATTGTGATAAAGGTTACTACTAGGAATGGGAGTGCTGGTTGGTTACCTCACAATTTAAATTATGGTC ACCTTGATTGGTTTTTCGGGCTATTGACAGTGTTGAGTGTACTGAATTTTGTTGTGTTCCTTGTAGTGTCTAAGTTTTAC ACATATAAAAGATTGGTTGGAACTCTCAGTTGA
Protein sequence (LotjaGi1g1v0123500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKDAVYAKDGTIDYLGNPAKKRKTGTWTACYFILGHEFCERFTYYGMSTNLVLYFKHQLHQHSATASKNVADWGGTCYI TPLIGALVADAYLGRYLTILYLSVVYVIGMALLTLSASVPGLKPTCYGKDNCHASHGQSAVCFLSLYLIALAAGGIKPCI SSFGADQFDDADEVEKQHKSSFFNWFFLSINTGGLIAASLMVWIQDNVSWGWGFGIPALAMAVSGVSFFSGTRLYRNQKP GGSPITRICQVIVASIRKYDVEVPNDESLLYETKDKVSAIQGSRKLDHSNGLRFFDKSAVPGNSDNVKDSVNPWRLCTVT QVEELKSVIRLLPIWVTGIIFATVFGQMSNYFVLQGETMDTNVGNLKFQIPPASVYIFNNLGVIFWVPVYDRIIVPIARK FTGHKNGLTQLQRIGTGLFISIFSMLYASTLETVRLGMVKRHKIYELKEVPMSIFWQVPPYFIIGCAEVFTFIGQLEFFY EEAPDAMRSLCSAFSLLTIGLGQCLSSLLVTIVIKVTTRNGSAGWLPHNLNYGHLDWFFGLLTVLSVLNFVVFLVVSKFY TYKRLVGTLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 98 | 98 | - | – | |
| Gene3D | 2 | 566 | 565 | 3.2E-211 | – | |
| PANTHER | 3 | 565 | 563 | 0.0 | ||
| PANTHER | 3 | 565 | 563 | 0.0 | – | |
| SUPERFAMILY | 19 | 558 | 540 | 5.23E-28 | ||
| CDD | 28 | 561 | 534 | 0.0 | – | |
| ProSitePatterns | 85 | 109 | 25 | - | ||
| Pfam | 96 | 525 | 430 | 1.1E-116 | ||
| TMHMM | 97 | 119 | 23 | - | – | |
| Phobius | 99 | 117 | 19 | - | – | |
| Phobius | 118 | 136 | 19 | - | – | |
| TMHMM | 134 | 156 | 23 | - | – | |
| Phobius | 137 | 156 | 20 | - | – | |
| Phobius | 157 | 181 | 25 | - | – | |
| TMHMM | 182 | 204 | 23 | - | – | |
| Phobius | 182 | 204 | 23 | - | – | |
| Phobius | 205 | 209 | 5 | - | – | |
| TMHMM | 208 | 230 | 23 | - | – | |
| Phobius | 210 | 229 | 20 | - | – | |
| Phobius | 230 | 330 | 101 | - | – | |
| Phobius | 331 | 353 | 23 | - | – | |
| TMHMM | 331 | 353 | 23 | - | – | |
| Phobius | 354 | 372 | 19 | - | – | |
| TMHMM | 368 | 390 | 23 | - | – | |
| Phobius | 373 | 390 | 18 | - | – | |
| Phobius | 391 | 410 | 20 | - | – | |
| Phobius | 411 | 428 | 18 | - | – | |
| TMHMM | 411 | 433 | 23 | - | – | |
| Phobius | 429 | 460 | 32 | - | – | |
| TMHMM | 458 | 480 | 23 | - | – | |
| Phobius | 461 | 480 | 20 | - | – | |
| Phobius | 481 | 491 | 11 | - | – | |
| TMHMM | 492 | 514 | 23 | - | – | |
| Phobius | 492 | 517 | 26 | - | – | |
| Phobius | 518 | 536 | 19 | - | – | |
| TMHMM | 534 | 556 | 23 | - | – | |
| Phobius | 537 | 556 | 20 | - | – | |
| Phobius | 557 | 570 | 14 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0123500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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