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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0134100 |
| Transcript ID | LotjaGi1g1v0134100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Octicosapeptide/Phox/Bem1p domain-containing protein; TAIR: AT5G64430.1 Octicosapeptide/Phox/Bem1p family protein; Swiss-Prot: sp|Q6C2X0|KAPR_YARLI cAMP-dependent protein kinase regulatory subunit; TrEMBL-Plants: tr|A0A0L9UXI5|A0A0L9UXI5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0134100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:21578120..21580055) extracted from Lotus japonicus Gifu genome v1.2.
GCATGTATCTGAGATCTGACACAATTTGGGCCTACTAGGCTACTACCCCACCACCACCCCTCTCACTCTCATCACTCATA AAAGTAAAACAAACACCACACTCTTCTTCTCCACTCTTCCATTTTTCTCTCTAGTAAACAACCACACTCCACTCCCGCTC AAAATTCTCCATCAAAACCCTAATTCCCAAAAATCCCCAATTCCATTTCACCAACAATGGAGAACAACAACAACAACTAC TCTTCCCACCCCAATTCTCGCGATTCCTCTCCTCGCTCCCGCTCCGATGTGATCGACACCACCACCAACAATGACACCAA CAACCACCACCACTCCTCCTTCGACGAACCCCCACCTCCTCCTCCCTCCGCCGCCGCATGCAAGGTCAAGCTCATGTGCA GCTACGGCGGCAAAATCCAGCCCCGCCCCCACGACAACAACCTCACCTACGTCTCCGGCGACACCAAGATCCTCGCCGTC GACCGCTTCATCAAGCTCCCCGCCTTCATCGCCAAGCTCACTTCCCTCACCAATTCCTCCGATTTCTGCCTCAAGTACCA ACTCCCCGGCGAGGATCTCGACGCGCTTGTCTCCGTCACCAACGACGAGGACCTCGATCACATGATGGTCGAGTACGATC GCCTCTCCCGTGCCTCACCGCGACCCGCGAGGTTGCGCCTCTTCCTCTTCCCCCTCAACAACAGCACCAACAACAGCTCT TCCTTCTCTTACTCCTCCTCCGCTCCCACCACCGCCGAACCGAAACCGCAGTGGTTCGTCGAAGCTCTGAACTCCGTTCA GGTTCAGAATCGTGAAGCTTCTCCTCCTCCTGCTCCGCTGCCTCCGCTTCCTCCGCCGGCGGCGAATCCGGATTTTTTGT TTGGATTGGATAACGCGCATCCCGTGGCTCCGAAGCCGGCCGACCTCCCGGATAACGCGGCGGCGGTTACGGAATGTGGG CCCGAGGCAGTTAGGGAAACGGAAATTCAGGAGCTTAGCAAAAACGAGCAATTGGTGGTTCAACGGAAAAAGGATGACGT GGCGGCGCCGTTGATCACACATGCAACTGCACAGGTGCATTCCGGTCCGGTTCAGTTTCATGGGAATGGGTACCCGTTGG TGCTTTCCGGACCGGGAGCCGACCCGGGCCCGGTTTACCTCATTCAAACACCGTCTGGGATGTACCAGGCCGTTCGGCCC GTGACTGGACCGGCGGGTCAGCCGATTTATTTCATTCAAACTCCGCAGCCGGTTCCCGAGCGTGGCTACTCGCAGATTAC GTACGTGCCTGAGGGGTCAGCTTTGCGGCGGCAGGCCACGGCGGCGCCTGGCGGTGATGGCTGGAATTGAAGGTGGCTGC GGCGCATGGAGGTTGTTGTTAAGAATTCATTTGCTGCTGTGTCTGCGTGATGATTGTGGATATAATTTTTCTATATTGGA TTTGGGGTGAACATTGTTTCATGTGCATAGGTGCATATTTTGAAAGGATTTAGTTGGGAATTGTTGTTAAGAGTGTAACT AGTTTTTAATTACTGGTAGTAGATATTGCTTTACATCAGTGATTGTTTGCCTCCTTAATGCTTGCCAGAATCGTTGTTTG GTTCCAGCTATGTATGTTAGCAATTGTTTGTGCTTTGTTTTATGGGTCTAGCTTGTCCAGGCTTTTTGACGCAAGGTTTG TCTCATTGCCTGCCATTTTTTACGCAATAGTATGGCCAACCCATTATAGGGATACGAGCTTTTGTAGAGTGTGTTTGGTG CTTTTATGTCCAGAGTTTCATAGTTTTTGTTAAGGAGAATTACACAGTGCAGGTTTTGAACTGTGCTTTGTGTTAAAGGA ATTTACACTTTCTTAAGCTACTAAGAAAAAAATAGGGGACAAAGCATAGGTGGGCTTGAAAAAACCCTTTACTGTACACG TGTCATACAATGAGGG
CDS sequence (LotjaGi1g1v0134100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAACAACAACAACAACTACTCTTCCCACCCCAATTCTCGCGATTCCTCTCCTCGCTCCCGCTCCGATGTGATCGA CACCACCACCAACAATGACACCAACAACCACCACCACTCCTCCTTCGACGAACCCCCACCTCCTCCTCCCTCCGCCGCCG CATGCAAGGTCAAGCTCATGTGCAGCTACGGCGGCAAAATCCAGCCCCGCCCCCACGACAACAACCTCACCTACGTCTCC GGCGACACCAAGATCCTCGCCGTCGACCGCTTCATCAAGCTCCCCGCCTTCATCGCCAAGCTCACTTCCCTCACCAATTC CTCCGATTTCTGCCTCAAGTACCAACTCCCCGGCGAGGATCTCGACGCGCTTGTCTCCGTCACCAACGACGAGGACCTCG ATCACATGATGGTCGAGTACGATCGCCTCTCCCGTGCCTCACCGCGACCCGCGAGGTTGCGCCTCTTCCTCTTCCCCCTC AACAACAGCACCAACAACAGCTCTTCCTTCTCTTACTCCTCCTCCGCTCCCACCACCGCCGAACCGAAACCGCAGTGGTT CGTCGAAGCTCTGAACTCCGTTCAGGTTCAGAATCGTGAAGCTTCTCCTCCTCCTGCTCCGCTGCCTCCGCTTCCTCCGC CGGCGGCGAATCCGGATTTTTTGTTTGGATTGGATAACGCGCATCCCGTGGCTCCGAAGCCGGCCGACCTCCCGGATAAC GCGGCGGCGGTTACGGAATGTGGGCCCGAGGCAGTTAGGGAAACGGAAATTCAGGAGCTTAGCAAAAACGAGCAATTGGT GGTTCAACGGAAAAAGGATGACGTGGCGGCGCCGTTGATCACACATGCAACTGCACAGGTGCATTCCGGTCCGGTTCAGT TTCATGGGAATGGGTACCCGTTGGTGCTTTCCGGACCGGGAGCCGACCCGGGCCCGGTTTACCTCATTCAAACACCGTCT GGGATGTACCAGGCCGTTCGGCCCGTGACTGGACCGGCGGGTCAGCCGATTTATTTCATTCAAACTCCGCAGCCGGTTCC CGAGCGTGGCTACTCGCAGATTACGTACGTGCCTGAGGGGTCAGCTTTGCGGCGGCAGGCCACGGCGGCGCCTGGCGGTG ATGGCTGGAATTGA
Protein sequence (LotjaGi1g1v0134100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENNNNNYSSHPNSRDSSPRSRSDVIDTTTNNDTNNHHHSSFDEPPPPPPSAAACKVKLMCSYGGKIQPRPHDNNLTYVS GDTKILAVDRFIKLPAFIAKLTSLTNSSDFCLKYQLPGEDLDALVSVTNDEDLDHMMVEYDRLSRASPRPARLRLFLFPL NNSTNNSSSFSYSSSAPTTAEPKPQWFVEALNSVQVQNREASPPPAPLPPLPPPAANPDFLFGLDNAHPVAPKPADLPDN AAAVTECGPEAVRETEIQELSKNEQLVVQRKKDDVAAPLITHATAQVHSGPVQFHGNGYPLVLSGPGADPGPVYLIQTPS GMYQAVRPVTGPAGQPIYFIQTPQPVPERGYSQITYVPEGSALRRQATAAPGGDGWN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 51 | 51 | - | – | |
| MobiDBLite | 1 | 16 | 16 | - | – | |
| PANTHER | 15 | 342 | 328 | 1.8E-86 | – | |
| PANTHER | 15 | 342 | 328 | 1.8E-86 | – | |
| CDD | 60 | 158 | 99 | 2.27913E-48 | – | |
| SMART | 71 | 160 | 90 | 1.1E-23 | ||
| SUPERFAMILY | 72 | 167 | 96 | 2.98E-20 | – | |
| Pfam | 72 | 159 | 88 | 1.5E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0134100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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