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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0138100 |
| Transcript ID | LotjaGi1g1v0138100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquitin carboxyl-terminal hydrolase family protein; TAIR: AT4G24560.1 ubiquitin-specific protease 16; Swiss-Prot: sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16; TrEMBL-Plants: tr|I1JGZ3|I1JGZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0138100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:22527234..22534986) extracted from Lotus japonicus Gifu genome v1.2.
CTCAAAATCACGCAATATCGTAAAACGGTAATATTCGTTTCATCGTCCGAAACAAATTTCCCTGATTCCCTTGTCTGAAT CAAACCTCAAACAACAATATACAACACAACACTGTTCCAAATTCCAATTCTTCTTCTTCTTCGTTGTGATTCTTGAAAAC TCCTTCAAAATCCTCAGTTTGCGTGTACGAGCTACATGCATATCTCACTCTCACCTCGAACCTCCTTGCTAATCTCACCC GCATCTCCGTCACCGTCCAATCACTCAAACTACCGCGATCGCCTCCACGGCCACACTCTCCGCCCTCTGCTATCGCTGCG TAAATGCGTGTCACACTCGATCTAGGGTTTCCGAGCCTGCTCCTTTTCGCGTTGGTTTGCCTCGTCGTGCCGGTTATCGG CTTTGCGGCGCGGCGGAGGTGGCGGCGCGCGGAGGCCAGGGCGGAGGATATCAGGAGGCTGCTTGTTCTTGCGGCGGAGG AGGCTGCTAGGGCGGAGATTGAGGCTTCGTATCAGTACGGCGCCGTTTCGGTTGCTAATAGTAATCTATGTGCCTTGTGC TTCTCCCCCACCACTACGCGGTGTGCAAGGTGTAAAGCTGTTCACTACTGGTACGCTTTCGGTTTCCAAATTTCTCTCAG AATTTTATTTGGGGTTTAGTTTTCATTGTGTAATTTGTAAATTGCATTGTGTTTGCCAATTGACATTGATTTTCATTTCT TTAGTCTAAGTGCCCTTTTTTGTGGAATGGGGTTTTGAGTGATCTATAAACCCCATGATGATATATTGATATGTTAAGCT TGCTTGTAAATTACAATGAAAATAAAACATGCAAAATCTTTGTCTTTGTTTGCATTATTGCATACATCCTAGAATATGAT CAAAATTCAGGAGATCAGTTGGTTGTTCCTTTCTATAAATCATGTTGCAACTTTTTATATTTCATAGAACTGCTGTTGGA GACTTGTTATTGTGTTTTGTATTAGAAATCTTTTTAGGAAGATAGAGACTTCTCTATAAGCAACCTTCTGAAGTTTGTAG TATGTAATATGATAGCTAGATTTTTGGATTCTTGACCCCTTCTTTTAGTGATAGGATTTTGTAATCTTGCATAATATGTT GAATATGCTCCGGTCTATGTTACTTAGTTGTCAATTTATTTCATATTGCTTACCTTTGTTTTCATGTATTTAGTTCTGGT AAGTGCCAAATTGCTCATTGGCGTCAAGGTCACAAAGATGAATGCCGTCCTCCCAGCACAACTCACCAGACCCATGATCG GGTAAGTGATCTTGGCAAGAAGGTAGCAGAGCCAGGCTACCGTGGAATCAATGATGATAAGTGTCAGATTGAAAGTACAG AGTATACAACATCCTCCAAGAAACCCCCATTGTCTGATATAAGCAGTTCTCCAGAAATATCTTGTGCAAAGGATGATAAC ATAAGAGTTGAGCCTATTGTAGAGGGGAATGTTAAAAAATCCAATTCTGAATTATCAAGTAACACATTTTCTGGATTTTC CGCTTCAGCTAGTGCTACTGCTAGTGACTCATCTGATGATTCCTCTGTTTGCGAGAGTGAAACCTTAAATGAGCATGAGA GATCCGAGGGACATATTTTTGCCGACCCTGCTCATGACATTTCTGATACCCCTTCAAATGGTAATAGCATTGGTGCAACC ATCCCACTGTCACCTAAGTTTGCTAGTTTGGTTGATTCCGTGGATGGTTTTTCTACAATGCCTAAACCGAAGCAAGTTAG ACCAGGTTTTAGTGAAGAAGAGTTTAAACTCACATCAAATGATACTTCTGGTTTCATGATGCGGAAGGGAGCCATGATTG AGCCTTCTATAGGGTCTTCTGGATTCTGGAATAAAGCTCTTGATTCAAGGGGGATAACAGATGACTCTTATGGTGATCTT CTTGCATCACAGTCTAATGAATCTCTTCCAAAGTCTGCTGGGGACAATATGGCAAGTACAAGATCAGCAGCATACTCAGA AAAAGGTGTTGATTCTTCAGGTCATTCTGATGCTTCCAGCATCCATAACTTGCAAACTGCTGGCTCTAAGATATCAAATC ATGTCACTATCAGCTCTGGCAGCAGCTTGAAGTCAGATGAAATCAGAAGTCGGCCACATACATTTGCTGATACGGAGTTA GTTTCTAGGACTGAAGAGCATTCACAGTACAGTACAAAATTTGGGAATAATGGGATCCAATCTGGCACTGCTACTCCATC TCAGATTGCTAGCTGTTCTCCAAATTCTAAGAATGGCTTGAAGATATCTGTGCAGAAAGTTGGTGATCAGTTTAGGGGAT CAAGTTTGTCTAAAAACATCCCACAAGCTGTTGGCAGTGATATTGCTGGAAAATACAGTGACAAGGTTATTCTTGAACAA ATCTTTTTATGTTCTTCTATGCGTTGCAGACTCGTTATCTTACATGGTCTATTAATTGTCACTGCAGGGTCTTTTTCCGT ATAATTTGTTTGTCAAGCTTTATAACTGGAATAGAGTGGAGTTTCAACCATTTGGTCTTATAAATTGTGGAAACAGGTAA TTTGAAATGATTTGTGTACGAGAAATAGGTAATTGATGCACTATGTGTAAGGGTTTTAATATATTTATGATTTATGATAT AGTTTTTTTATAACAAAGGCGGAAGAAAAGAAAAAACAACAAAAACCATGCATTATTTTCTTTATTTTCCAGAAGGATCA ATATTTATTGCAGGTTGTTGATTGATCCATGTAAATGATTAGTTTGTTTTCTTAGGGGTCAGTACACCGTTGTGTATAAC TTTGCTTTTTTTTTTTTTCATAATTTTTGCAGCTGTTATGCTAATGCTGTACTCCAGTGTTTGGCATTTACACCACCCCT GACTGCTTATCTGCTTCAAAGACTTCATTCTAAATCATGTATGTATGCGATCCGAGTTTAGTATTTGGATCATCACATGC TCAATTTCTCGAGTACTATCTGTTTAACTGTTCCGTGGGGTTTTCTCATGTCAATTCCAGGTACAAATAGAAAATGGTGT TTCGTCTGTGATCTTGAAAGTTTGATTTTGAAGGCAAAAGACACAAAATCTCCCCTTTCACCTAAGGACATACTCTCTCA ACTACAGAAAAATGGAAGTCAACTTGGTAATGGAAGAGAAGAAGATGCACATGAATTTCTAAGGTGCAGTTTACGTCTTT GAATCCAATTAAATTGATATTTCATAATTCTTGTTTTATTTTCAACTCACGGTAATGAGTTACGTAACAGACATGTGATC GAGACGATGCAATCTGTTTGCCTTATGGAATCTGGACCTAACATGCCAGACTCATTAAAAGAGGAAACAAATTTAACGGG TCTAACATTTGGAGGCTACCTTCGTTCAAAGGTAATGTTATTGGAAAATAATAATATGCATCTATCTGTTATGATTTTGT ACCTTCCCAAATTATAGGTCCAACAACATCGGCCTGTTTTCAAAATGGATGACTTTTTTTTTATCCTATTACCTAGCATC CATTGATGCAAGTAAGATGAACAATGAACATTAAGCTGATAATATGTTGACAGATAAAATGCATGAAATGCGGAGGGAAA TCTGAGCGTCAAGAAAGGATGTTGGATCTGACTGTTGAGATAGAAGGGGAGATAGCGACCTTGGAGGAGGCCCTTCGACA GTTTACAAGCATCGAGACTCTAGATGGAGAAAACAAGTACCACTGTGTCAGGTAGGATCCTCTTGAAAACTTTATATATC ATCATATCGTTGTCATGTTTTCAAAATTATATAACTAATAAGGTCAAAAGAATATATTGCTGCTTACAGTTCTGAAATTG GGTCTGATATTTGTCTTTCTATTTTAGTTTTTGTTTTTCTGTCCCAGATAGGTGCATGATACAAATTAAGATTATGGCCT AGTCCTTACCTATTCAGAAAAATTAGAGGGAACAAAATTTGGAATTTTAAATAAGTCAGGAGAGAGGATATGGTGGTGTT AGGGTGTTGTGTATCCACTTCTATGGTGATGAAAAATATCTTCATAAATAAGTTGAGGGATTGAGGCGTTTTATGGTTAA TTTAAGTAAAAGTGAACCTGGGTTTTAGAAAAAAAACTTCTAATAACATCTGTTACATCTGTTCAAGAAAATGTGTCTGC GTGGCTTTGAATTGGATACTCCAGATTAGAAATTGAATTGAATAAGAAAATATTTCTTGCTTAGGATTAGGATCCCTGAA TCCGGGCAGTTAGCAATTACATTGGATTATTGGAAGCTTGATCACATCACACAGGACTAACTGTCTAAGAAGACAGCGAT CCCCTGAAATAGTACTAGAGTCATGAAGAATTCTTTTACCCCATTATGAATGAGTTTGCTAAATGAATCCTACTATGTAA TAAAAATTACATGAATATGACATGGATGCTGATTTCAGGAAGATTTGATTAGTTAGGTTAATTCAGGATATTTCTATTTA TATCTTTATATATTTATTAGTTATGAATTGTTATATCTTTATTAGTTAGGATTTAATTGTTTTTCTTCATTAGATAAGAT TTTGATTGTTTCTTATCTTATTAGATATAGGATCTTTTAAATTAGGTAGGATTCTAGTTTCCCTATTTCCTTGTACTCAA GTGACTCAACCCTTATAATAAAAGGGGATTTCAGAATTGAATAAAATAAATAAACTAGTATTTTCTTAAGGAACCATAAA TTGGAAGAGGCTCTGTGAAGGACGAGCACGCTTCTTTTCTACAGCATAGGTCGCAAGAAGAATTCTCTTGTGTCTAGTAG ACCCATGACAAGATCCTCGGCTAAGGGCCATAACAGAGTGCTTATGAAATATGAAGTACTAAAATGACTGCCATGATACT TCAACATAAGCGAAACTGTTATGGTGTATAAAGTATAAACTTCATAACAGCTTTCAACAGTAAAATGGATGGCAAGTTAT TTGGTCTATTAAGGTCTGCAAGGATTTTCATTACATGACATGTGCCAAACTTTTTTACCAAGGTATGTAGTGGCTTGTGT GTGGCCTACCTTTTTCTATAAGCCAAAAAAAAATGCAACAAAAGAGGGTACAAAGGGAGGGGGGGGGTGTACCCTAACCC ATTTACAAAACTAATCTGTTAAGCATAGTAAAGGATGTCTCTATACCAGTCAACAAAAGAAAAGTTAAAACCTTTGAGTC TACCCCTTGCCAAGACCAAGCTAATGCCTTAACTCTTTCCAAAAGAGATGGAATACATAGATTACCATTTTTAAAGATAA TATAATTGCGTACCCACCAAATGCTCCAAACAACTGCAAACCATACATCTGTTAAGACCTTCTTAGAAAACTCGCCGTAA AGGAGCTCAGTAAATTGTGAAACCATATTTTGGAAATCTAGTTAGTGTTCATCAGTTTAATTGGATGCTAAAACTTTTAT TTTATTTTTTTTATTTCACTTATATAGTTATATTCGTTTAAGAATGGTTGTCTTTCGCGTAAAGAAAAGGTTGGCTGTCT TTCATCTCTATTAAAACTTTTTGATATGTTAAGTGTTGTTGTCTTTGACTTGGTATTTGTAGAACTGATGAATATGTGTA AATTTTCTCTTTCAAAGTTGTGATATACGGAGTTTTCCTGTTATTGATCATCTGTTTCATGTTGAGCAGATGTAAATCTT ATCAGAAGGCCAAGAAGAAAATGACAGTTTCAGAGGCACCTAATGTTCTTACAATTACATTAAAAAGATTTAAGGTATAT CTGTTAAAATTCAATGACAAGATTTACCCTATCTTTTGTGTCATTAAATATTTATATATTTGTTACCCATGTGCTGCAGT CTGGAAAATTTGGGAAGCTCAATAAGTCTATTCGGTTTCCTGAAATACTTGACTTGGCACCTTTCATGAGCGGGACTAGT GATTTGGCTATATACAGGCTGTATGGGGTGGTTGTTCACTTGGATACCATGAATGCTGCCTTTTCAGGTCACTATGTGTG CTATGTAAAGAATTTCCAAAACAGGTGGTTCAAGGTTGATGATAGTGTGGTATGTCTCAGTTCCCATTTATTTGCATATC TTGTACACAAATATCCTTGGTTCTGACATATACTTGCATTTATGCTTTCCTTAATCAGTGCTCCGTCCTATAAGGTCACA TAAGATAAAATGGTACTCTATAGTTATAAGAAATATTTGATTAAATTACATAAGCTTTGAGATTTGTATGGTTTGTTTAT TTTATAGATGACTTCATTATCTTTAATTCTATTACACGTTGCAGTCTAAACAAAACTCTTAATTGTAGCACAATAAAACT GTGAATAATAGTATGACACAAGGTAGACAAATGATAAATGCTAGGTCTCTGGCATGGAACAAAGGTGTCCACGAATGGAA GTCCTAGAGTCCCTGACAAATTTGCTCTGTAATATCCTTTCTTATCCGAGTTGGTCATTCACAAGATTTATTGAGTTTTA TGACTGAACTGAAGCGTGAAGTGTTTGTGGATGTTTAATTGTTTATTAAGCTGTTTTATCTGTTGATATTTCACTCCAGG TGTTGCCTAGGAACTCATTTGACAATCTCTCCTATGTCTTACAGGTGACAGCTGTTGAATTGGAAACTGTCTTGACAAAA GGAGCATACATGCTTTTGTATGCAAGGTAACCCATCTATGATCTAGTTTTTCTATCATGTTTTTTTTTTGGGAGGGGGGG GGGGGAGGAATATCTTATTTTTCTCTTCAGGGTTTTTCATTTAATTATATTCAGTGTTGTCAAATAGACAATATAGCGGC ACTATAGTGCTATAGTGTAACGCTCTGAGGGCTCACCGGCATCGCTATCCACTATTTTCCGTTTTGAGGGCTTGACAAAG CGGATTTTTTGCTTTCTGCTATTTTTCATGGTTAACAACACTTTATATTGTCTCTTTTCCACTTCTCTGACTAGCTGATC CACCTTGTAGGTGCTCACCCAGGGCCCCAAGATTGATCCGGAACATGATAGTATCCTCTGACCCGAAAAGCAAAGCCCAT GCAAAAACTGTTGCAATGAAGGCAAGAAATGTGTCTTCAGATTCTGGTGCTGCTGAGAGCATGACTGGTTTGGTTTCCCC AGATGGTCCACACACCTTAGAGAAGTTTCTCGACATGAAAAGGATTTTTGAAGAAGACTCGTCGAGTGATAATTCATCCC TGATGAGTAGCAACTCTGATGAATGGTCTTGCAGTACTGATAGCACCTGTGATTCAACAAGCACTGATGATTATGCTGAT TATATTTTTGGTAATTCGGGACGCGGCTTGGGTGGCATCTTGAGAAATTCTGATTCTGAGGTAGATGGTCTTTTGTACAG AAGCAGAGGCGTTTCTCATTTGCATACTGACACAATTGTAGAGCATAGGAAGTTAGATACAAGTAGGAGTAGCAGCAGTT TTAGGGAAACTGGCTCTTTACAGAGATCAGGATCCAACCATTTTAGTGATATAAATTCTGGAGTATTGTATAGAAAATCA AAATTAAGAACGGATTGAAAAGTTTATCTTATACCATTTGAAGATTGGGAGAGGTGGATATCACAAGAAAATCAATTTCA TTCTTTTATCTGTTTTAATTAGATATAGAAGTAGATTTCTGTGGCATCTTGAAATTACATAATTCAAAGGGTTATTTTTT AAATCCAAAAGAAGAGGTCGATCCGCAAATGCTTATCTATAGGTTAAAAATGATTTTTTTTTCAAGATAATTA
CDS sequence (LotjaGi1g1v0138100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTGTCACACTCGATCTAGGGTTTCCGAGCCTGCTCCTTTTCGCGTTGGTTTGCCTCGTCGTGCCGGTTATCGGCTT TGCGGCGCGGCGGAGGTGGCGGCGCGCGGAGGCCAGGGCGGAGGATATCAGGAGGCTGCTTGTTCTTGCGGCGGAGGAGG CTGCTAGGGCGGAGATTGAGGCTTCGTATCAGTACGGCGCCGTTTCGGTTGCTAATAGTAATCTATGTGCCTTGTGCTTC TCCCCCACCACTACGCGGTGTGCAAGGTGTAAAGCTGTTCACTACTGTTCTGGTAAGTGCCAAATTGCTCATTGGCGTCA AGGTCACAAAGATGAATGCCGTCCTCCCAGCACAACTCACCAGACCCATGATCGGGTAAGTGATCTTGGCAAGAAGGTAG CAGAGCCAGGCTACCGTGGAATCAATGATGATAAGTGTCAGATTGAAAGTACAGAGTATACAACATCCTCCAAGAAACCC CCATTGTCTGATATAAGCAGTTCTCCAGAAATATCTTGTGCAAAGGATGATAACATAAGAGTTGAGCCTATTGTAGAGGG GAATGTTAAAAAATCCAATTCTGAATTATCAAGTAACACATTTTCTGGATTTTCCGCTTCAGCTAGTGCTACTGCTAGTG ACTCATCTGATGATTCCTCTGTTTGCGAGAGTGAAACCTTAAATGAGCATGAGAGATCCGAGGGACATATTTTTGCCGAC CCTGCTCATGACATTTCTGATACCCCTTCAAATGGTAATAGCATTGGTGCAACCATCCCACTGTCACCTAAGTTTGCTAG TTTGGTTGATTCCGTGGATGGTTTTTCTACAATGCCTAAACCGAAGCAAGTTAGACCAGGTTTTAGTGAAGAAGAGTTTA AACTCACATCAAATGATACTTCTGGTTTCATGATGCGGAAGGGAGCCATGATTGAGCCTTCTATAGGGTCTTCTGGATTC TGGAATAAAGCTCTTGATTCAAGGGGGATAACAGATGACTCTTATGGTGATCTTCTTGCATCACAGTCTAATGAATCTCT TCCAAAGTCTGCTGGGGACAATATGGCAAGTACAAGATCAGCAGCATACTCAGAAAAAGGTGTTGATTCTTCAGGTCATT CTGATGCTTCCAGCATCCATAACTTGCAAACTGCTGGCTCTAAGATATCAAATCATGTCACTATCAGCTCTGGCAGCAGC TTGAAGTCAGATGAAATCAGAAGTCGGCCACATACATTTGCTGATACGGAGTTAGTTTCTAGGACTGAAGAGCATTCACA GTACAGTACAAAATTTGGGAATAATGGGATCCAATCTGGCACTGCTACTCCATCTCAGATTGCTAGCTGTTCTCCAAATT CTAAGAATGGCTTGAAGATATCTGTGCAGAAAGTTGGTGATCAGTTTAGGGGATCAAGTTTGTCTAAAAACATCCCACAA GCTGTTGGCAGTGATATTGCTGGAAAATACAGTGACAAGGGTCTTTTTCCGTATAATTTGTTTGTCAAGCTTTATAACTG GAATAGAGTGGAGTTTCAACCATTTGGTCTTATAAATTGTGGAAACAGCTGTTATGCTAATGCTGTACTCCAGTGTTTGG CATTTACACCACCCCTGACTGCTTATCTGCTTCAAAGACTTCATTCTAAATCATGTACAAATAGAAAATGGTGTTTCGTC TGTGATCTTGAAAGTTTGATTTTGAAGGCAAAAGACACAAAATCTCCCCTTTCACCTAAGGACATACTCTCTCAACTACA GAAAAATGGAAGTCAACTTGGTAATGGAAGAGAAGAAGATGCACATGAATTTCTAAGACATGTGATCGAGACGATGCAAT CTGTTTGCCTTATGGAATCTGGACCTAACATGCCAGACTCATTAAAAGAGGAAACAAATTTAACGGGTCTAACATTTGGA GGCTACCTTCGTTCAAAGATAAAATGCATGAAATGCGGAGGGAAATCTGAGCGTCAAGAAAGGATGTTGGATCTGACTGT TGAGATAGAAGGGGAGATAGCGACCTTGGAGGAGGCCCTTCGACAGTTTACAAGCATCGAGACTCTAGATGGAGAAAACA AGTACCACTGTGTCAGATGTAAATCTTATCAGAAGGCCAAGAAGAAAATGACAGTTTCAGAGGCACCTAATGTTCTTACA ATTACATTAAAAAGATTTAAGTCTGGAAAATTTGGGAAGCTCAATAAGTCTATTCGGTTTCCTGAAATACTTGACTTGGC ACCTTTCATGAGCGGGACTAGTGATTTGGCTATATACAGGCTGTATGGGGTGGTTGTTCACTTGGATACCATGAATGCTG CCTTTTCAGGTCACTATGTGTGCTATGTAAAGAATTTCCAAAACAGGTGGTTCAAGGTTGATGATAGTGTGGTGACAGCT GTTGAATTGGAAACTGTCTTGACAAAAGGAGCATACATGCTTTTGTATGCAAGGTGCTCACCCAGGGCCCCAAGATTGAT CCGGAACATGATAGTATCCTCTGACCCGAAAAGCAAAGCCCATGCAAAAACTGTTGCAATGAAGGCAAGAAATGTGTCTT CAGATTCTGGTGCTGCTGAGAGCATGACTGGTTTGGTTTCCCCAGATGGTCCACACACCTTAGAGAAGTTTCTCGACATG AAAAGGATTTTTGAAGAAGACTCGTCGAGTGATAATTCATCCCTGATGAGTAGCAACTCTGATGAATGGTCTTGCAGTAC TGATAGCACCTGTGATTCAACAAGCACTGATGATTATGCTGATTATATTTTTGGTAATTCGGGACGCGGCTTGGGTGGCA TCTTGAGAAATTCTGATTCTGAGGTAGATGGTCTTTTGTACAGAAGCAGAGGCGTTTCTCATTTGCATACTGACACAATT GTAGAGCATAGGAAGTTAGATACAAGTAGGAGTAGCAGCAGTTTTAGGGAAACTGGCTCTTTACAGAGATCAGGATCCAA CCATTTTAGTGATATAAATTCTGGAGTATTGTATAGAAAATCAAAATTAAGAACGGATTGA
Protein sequence (LotjaGi1g1v0138100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRVTLDLGFPSLLLFALVCLVVPVIGFAARRRWRRAEARAEDIRRLLVLAAEEAARAEIEASYQYGAVSVANSNLCALCF SPTTTRCARCKAVHYCSGKCQIAHWRQGHKDECRPPSTTHQTHDRVSDLGKKVAEPGYRGINDDKCQIESTEYTTSSKKP PLSDISSSPEISCAKDDNIRVEPIVEGNVKKSNSELSSNTFSGFSASASATASDSSDDSSVCESETLNEHERSEGHIFAD PAHDISDTPSNGNSIGATIPLSPKFASLVDSVDGFSTMPKPKQVRPGFSEEEFKLTSNDTSGFMMRKGAMIEPSIGSSGF WNKALDSRGITDDSYGDLLASQSNESLPKSAGDNMASTRSAAYSEKGVDSSGHSDASSIHNLQTAGSKISNHVTISSGSS LKSDEIRSRPHTFADTELVSRTEEHSQYSTKFGNNGIQSGTATPSQIASCSPNSKNGLKISVQKVGDQFRGSSLSKNIPQ AVGSDIAGKYSDKGLFPYNLFVKLYNWNRVEFQPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQRLHSKSCTNRKWCFV CDLESLILKAKDTKSPLSPKDILSQLQKNGSQLGNGREEDAHEFLRHVIETMQSVCLMESGPNMPDSLKEETNLTGLTFG GYLRSKIKCMKCGGKSERQERMLDLTVEIEGEIATLEEALRQFTSIETLDGENKYHCVRCKSYQKAKKKMTVSEAPNVLT ITLKRFKSGKFGKLNKSIRFPEILDLAPFMSGTSDLAIYRLYGVVVHLDTMNAAFSGHYVCYVKNFQNRWFKVDDSVVTA VELETVLTKGAYMLLYARCSPRAPRLIRNMIVSSDPKSKAHAKTVAMKARNVSSDSGAAESMTGLVSPDGPHTLEKFLDM KRIFEEDSSSDNSSLMSSNSDEWSCSTDSTCDSTSTDDYADYIFGNSGRGLGGILRNSDSEVDGLLYRSRGVSHLHTDTI VEHRKLDTSRSSSSFRETGSLQRSGSNHFSDINSGVLYRKSKLRTD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 12 | 29 | 18 | - | – | |
| Phobius | 30 | 1006 | 977 | - | – | |
| Coils | 40 | 60 | 21 | - | – | |
| PANTHER | 49 | 350 | 302 | 0.0 | – | |
| PANTHER | 49 | 350 | 302 | 0.0 | – | |
| Gene3D | 67 | 117 | 51 | 2.2E-12 | – | |
| SUPERFAMILY | 73 | 115 | 43 | 3.66E-11 | – | |
| ProSiteProfiles | 76 | 113 | 38 | 11.577 | ||
| Pfam | 76 | 113 | 38 | 2.4E-9 | ||
| ProSitePatterns | 76 | 113 | 38 | - | ||
| MobiDBLite | 151 | 171 | 21 | - | – | |
| MobiDBLite | 205 | 235 | 31 | - | – | |
| MobiDBLite | 205 | 222 | 18 | - | – | |
| MobiDBLite | 343 | 378 | 36 | - | – | |
| PANTHER | 370 | 997 | 628 | 0.0 | – | |
| PANTHER | 370 | 997 | 628 | 0.0 | – | |
| MobiDBLite | 395 | 436 | 42 | - | – | |
| MobiDBLite | 404 | 424 | 21 | - | – | |
| Gene3D | 509 | 824 | 316 | 1.5E-87 | – | |
| SUPERFAMILY | 511 | 822 | 312 | 1.9E-84 | ||
| ProSiteProfiles | 515 | 819 | 305 | 52.12 | ||
| Pfam | 515 | 816 | 302 | 1.7E-45 | ||
| ProSitePatterns | 516 | 531 | 16 | - | ||
| MobiDBLite | 966 | 987 | 22 | - | – | |
| MobiDBLite | 972 | 987 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. | ||
| Biological process | Protein deubiquitination | The removal of one or more ubiquitin groups from a protein. | ||
| Molecular function | Thiol-dependent ubiquitinyl hydrolase activity | Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin. |
Expression pattern of LotjaGi1g1v0138100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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