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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0146800 |
| Transcript ID | LotjaGi1g1v0146800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Major facilitator superfamily transporter; TAIR: AT1G78130.1 Major facilitator superfamily protein; Swiss-Prot: sp|O34367|YTBD_BACSU Uncharacterized MFS-type transporter YtbD; TrEMBL-Plants: tr|I1MAS9|I1MAS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0146800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:24956505..24960413) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAGACTACCTTGTTGGCACCCTATACCCTCTCAAATCAACCCATCTGGCATCTTACATCAACTCCAGTCCCACCCAT CAAAGACTAAAATAGCAAACACAAACCGCCACAAAAATAAACTAACGAACGCCAAACTGGACTCACTGCCACCGTCTCAC GAATCAATCAAACCAACAACAAAGGATTCCAAGATCCACATCACCCACCACCAACCACATTTAGCAGCTAAAATACCGTG TCTGAAACTCCAACTGTAATAATAATCAAGAAGAAGAAGAAGAAGATGGTGAAGATGAAGATGAAGATGAAGATGAAGGC GGAGATGGTGACACTGGTGCTGGTGAACCTGGCGGGGATCATGGAGAGAGCCGACGAGTCACTCCTTCCCGGCGTGTACA AGGAAGTCGGCACAGCGCTTCACACTGACCCCACTGGACTTGGTTCTCTGACTCTGTTTCGCTCCATCGTGCAATCTGCG TGCTACCCTGTTGCTGCGTACCTCGCCACGCGCCATAACCGGGCCCACGTCATCGCGCTCGGTGCTTTTCTCTGGGCTGC CGCCACTTTCCTTGTCGGCTTCTCCTCCACCTTCTTTCAGGTCACCGCTCAATTCTCTCTTCTTCTTGTTCTTGTTGCTG CCCAATACGGCGTCGTTTAGGGATCGGAAGTTCTTCATAGCTAAAATGAAAATGATCATATCGGAAATTCTTAACAGAAT TGCAAATTGCGTTGAATCATGTCATTCAAATTGCATTCTCAATTTTTTTTTAGTAGACGAAAAATGAATATCCCTTTGAA TCGAAGGAAAAATTCTGGGGTTTACATAATTAGACCATTGCTGTTATTTAGACATTTATAGTTTCTATTAAATATAGAAA CATTCATTTATCCCTTACCCAACAACTTAGTGTCTGTTTAGTTTTCAGTTAAGTGATTTCATCCAACGGAGGTCCAAAGC TTCTTTCACGTTTGAGGCATTGGAATATTGGAATGTGTGATCTCAAATTTCAATGCTCCTAACAGACTTCGAAACTGAAA ATCAAACACAGCCTTAAGCTTTTGGGATAATTGGTTGTCTGATAGTTTAAATATGGTTGAATGTTAATGGAGGAAGGGAA AGGCAAAGAACTGTGTTCACCAGCTTTCAAAGAATGCGCGGTACAAGGTTTCGTAACACGCGAAACGTGAAAGAAACTCG GTTGAGGTTTAGTTTGGTTCAACTTAAAACCAAACATGCACGCCTATAGGTGTGAAAAGAATGTCTCTAAATTATAGCCT CAATTGACCTATACATGTTACAAAATAAAAGGCGTAAAACATTAGGCTTGATTCATTTACATGAAAGTGTTCAGAAATGT ATAAGAAATTAGTGTTCAAGACTCAAGACCACTGGAATTTCGAAATAACATGTTGGCATTTTTTTGCTTTTGGATTTGGC AGTAGGCACATATATGAAGTTCTTAAAGTAGTTTCTGTGTAACTGCTACCCTTTTGTAGATATACAGCTGATTGAATTCA CTTTGAACTTTGAAGTCATTGTATTATAGGTAGCTGTATCGCGAGGTTTAAATGGAATTGGCCTGGCACTAGTCACACCT GCAATTCAATCCCTTGTTGCTGACTCAACTGATGATAACAATCGCGGCATGGCTTTCGGATGGCTTCAACTAACAGGCAA TCTTGGCTCAATTATTGGTGGCCTCTTCTCAGTGTTGATAGCTCCATATACAGTGTTTGGTATCGCTGGTTGGAGAATTT CCTTTCATATTGTTGGAGTAATAAGCATTATAGTTGGTGCTTTAGTGTACCTCTTTGCCAACGATCCACACTTTTCGGAT AACGGTACAGATAATCGCAATCAAGCTCCGAACAAAACATTTTGGTCAGAAGTAAGAGATCTGGTCCAGGAAGCCAAGTC AGTATCGAAGATTTCATCTTTCCAGATCATTGTCGCACAAGGTGTCACTGGCTCATTTCCGTGGTCTGCTTTGTCATTTG CGCCGATGTGGTTAGAGCTCACCGGATTCTCCCACAAGACAACGGCATTCCTCATAGCTTTATTTGTTATCGCCAGTTCT ATTGGGGGTTTGTTTGGAGGTAAGATGGGGGATATCCTCTCCAGGCGTTTTCCGAATTCTGGGAGGATTATTCTTTCACA GATAAGCTCTGGATCAGCAATCCCCCTAGCAGCACTTCTTCTGCTGGGTTTACCGGATGATCCGTCTACAGCAATACCTC ATGGTTTGATTCTAATCATTATGGGGCTCTTCATATCTTGGAATGCTCCAGCTACAAACAAGTATGTGTTTCAAACTAGC CACTTTTATGTTTGCTTCATCATTTTGCCTTTCATTTATCCTTATTTCGTATAGTATTTGCCACAAACATTCTGAAAATA TGCGTCACACCTTCCAACTTTTGTTAAAATAAAAATTATTAAGCTTACATATTATTCAGTATGTTGCAACAAGTTGGTGG TCTCTCATTGGTCAAACATGTGTGAGTACCAATATAAAGTCCTCTTTAGGCTTGTGGCTCTTGACCTTGGAATGGGACTT GCAACCTAAAAAATTAGAGTTGAATAGAGAAAAATGATATGAATAGGTATCCTCAATTAGCTCTGAACAGTCCAAATAAG TTCAACTTTTCAAGTTACTTTTTTAACACAGTTTTTAAATTAGTACTAATTTGCATGGTTTTTGAACATCTTTATCAATA GTTTGTGTTTACTTTGTGGCTTTATGCAAACCATTCTGTGTATGAAATAGTGCATAGGATACCTTGTTTCTTTTATTGTG ATTTAGAACTGGAAAAAGAGCTCTGTGTGATTCTAGTAAAGCTTATTCAAGTTATGTGTTGATGCATAGGCTAATTTGTC AACTGTCTGGGCATTAGTCCAATTTTCGCAGAGATAGTTCCAGAGAGAGCGCGAACAAGTGTATATGCCTTGGACCGATC TTTTGAGTCTATACTATCATCATTTGCTCCCCCCACAGTGGGGATTTTGGCTCAGCATGTTTATGGGTATAAGCCTATTC CTGAAGGATCCAGTGAATCTCTCGAGATTTCAACAGATAGAGAGAATGCTGCATCATTGGCCAAGTCTCTTTACACAGCA ATAGGAATTCCAATGGCTCTGTGCTGTTTAATCTACTCATTTCTTTATAAGACCTATCCAAGAGACCGGGAACGAGCGAG GATGGAGGTTTTAATAGAATCAGAGATGCAGCAAATTGAATCAGATGGGTTAGCCATTGATAAAGAGATTGCCTCAGAAG AACTGTCTATTAGGGATTATGATGGTGATGGTGTTGATCTTGATCTTGATGATGAAGAGAACATATTGCTCTATAGGCAG TTAACATTCTCCAACTTAGGTGACTAGTTAACTCAAAAGATATTGACAAAATTTAGAGGGTCTTTTTCCAACTTTGGATG AGCTTATTTTTCATGGAATCAATTCTTGCACTTAAAAGTTACTCACAGTAATTTCTCCCCAGAATTGATTTTACATGCAA AATCCATCATAGAATGATTTTCAAATATGCTTTCACTGGTGGAGAATTTTTCAGAACTACATTTTGATCAATTTTTTGCA TAAATCAAACTCGGACACTAATAGAAGAAACGGTACACACCATCATAGTTTTATCTTCCACTTCTTGGGGGAAGATTTTC TTTTGTTCTATGTATTTTGATTATGTAAAATGTAAAACCTTGGATAGCAATGAATGTACATTTCTCGGTTTTGGCTTATG TAATTGACATTTTGATTTGTTAAATATCAAGTATAGTGCAAAAATTGTTTAATAATCCCAGTGCATAAATCATTGACATT TGTTGAAGGGTAAGGTATTTCTACCTGTGCTCATCCTGGTTCCTAGACCTAATTATCAAATTTATGTTT
CDS sequence (LotjaGi1g1v0146800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTCGGATGGCTTCAACTAACAGGCAATCTTGGCTCAATTATTGGTGGCCTCTTCTCAGTGTTGATAGCTCCATA TACAGTGTTTGGTATCGCTGGTTGGAGAATTTCCTTTCATATTGTTGGAGTAATAAGCATTATAGTTGGTGCTTTAGTGT ACCTCTTTGCCAACGATCCACACTTTTCGGATAACGGTACAGATAATCGCAATCAAGCTCCGAACAAAACATTTTGGTCA GAAGTAAGAGATCTGGTCCAGGAAGCCAAGTCAGTATCGAAGATTTCATCTTTCCAGATCATTGTCGCACAAGGTGTCAC TGGCTCATTTCCGTGGTCTGCTTTGTCATTTGCGCCGATGTGGTTAGAGCTCACCGGATTCTCCCACAAGACAACGGCAT TCCTCATAGCTTTATTTGTTATCGCCAGTTCTATTGGGGGTTTGTTTGGAGGTAAGATGGGGGATATCCTCTCCAGGCGT TTTCCGAATTCTGGGAGGATTATTCTTTCACAGATAAGCTCTGGATCAGCAATCCCCCTAGCAGCACTTCTTCTGCTGGG TTTACCGGATGATCCGTCTACAGCAATACCTCATGGTTTGATTCTAATCATTATGGGGCTCTTCATATCTTGGAATGCTC CAGCTACAAACAATCCAATTTTCGCAGAGATAGTTCCAGAGAGAGCGCGAACAAGTGTATATGCCTTGGACCGATCTTTT GAGTCTATACTATCATCATTTGCTCCCCCCACAGTGGGGATTTTGGCTCAGCATGTTTATGGGTATAAGCCTATTCCTGA AGGATCCAGTGAATCTCTCGAGATTTCAACAGATAGAGAGAATGCTGCATCATTGGCCAAGTCTCTTTACACAGCAATAG GAATTCCAATGGCTCTGTGCTGTTTAATCTACTCATTTCTTTATAAGACCTATCCAAGAGACCGGGAACGAGCGAGGATG GAGGTTTTAATAGAATCAGAGATGCAGCAAATTGAATCAGATGGGTTAGCCATTGATAAAGAGATTGCCTCAGAAGAACT GTCTATTAGGGATTATGATGGTGATGGTGTTGATCTTGATCTTGATGATGAAGAGAACATATTGCTCTATAGGCAGTTAA CATTCTCCAACTTAGGTGACTAG
Protein sequence (LotjaGi1g1v0146800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFGWLQLTGNLGSIIGGLFSVLIAPYTVFGIAGWRISFHIVGVISIIVGALVYLFANDPHFSDNGTDNRNQAPNKTFWS EVRDLVQEAKSVSKISSFQIIVAQGVTGSFPWSALSFAPMWLELTGFSHKTTAFLIALFVIASSIGGLFGGKMGDILSRR FPNSGRIILSQISSGSAIPLAALLLLGLPDDPSTAIPHGLILIIMGLFISWNAPATNNPIFAEIVPERARTSVYALDRSF ESILSSFAPPTVGILAQHVYGYKPIPEGSSESLEISTDRENAASLAKSLYTAIGIPMALCCLIYSFLYKTYPRDRERARM EVLIESEMQQIESDGLAIDKEIASEELSIRDYDGDGVDLDLDDEENILLYRQLTFSNLGD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 316 | 316 | 2.49E-28 | ||
| Gene3D | 1 | 63 | 63 | 5.1E-6 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 376 | 376 | 4.3E-190 | – | |
| Pfam | 1 | 249 | 249 | 4.6E-18 | ||
| CDD | 1 | 304 | 304 | 2.02722E-38 | – | |
| PANTHER | 1 | 376 | 376 | 4.3E-190 | – | |
| ProSiteProfiles | 1 | 312 | 312 | 9.336 | ||
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 12 | 30 | 19 | - | – | |
| Phobius | 31 | 36 | 6 | - | – | |
| Phobius | 37 | 57 | 21 | - | – | |
| TMHMM | 38 | 57 | 20 | - | – | |
| Phobius | 58 | 130 | 73 | - | – | |
| Gene3D | 97 | 321 | 225 | 9.2E-15 | – | |
| TMHMM | 100 | 122 | 23 | - | – | |
| Phobius | 131 | 151 | 21 | - | – | |
| TMHMM | 132 | 154 | 23 | - | – | |
| Phobius | 152 | 171 | 20 | - | – | |
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 172 | 189 | 18 | - | – | |
| Phobius | 190 | 194 | 5 | - | – | |
| Phobius | 195 | 213 | 19 | - | – | |
| TMHMM | 199 | 221 | 23 | - | – | |
| Phobius | 214 | 288 | 75 | - | – | |
| TMHMM | 242 | 261 | 20 | - | – | |
| Phobius | 289 | 307 | 19 | - | – | |
| TMHMM | 289 | 308 | 20 | - | – | |
| Phobius | 308 | 380 | 73 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0146800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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