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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0148100 |
| Transcript ID | LotjaGi1g1v0148100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan 1,3-beta-glucosidase; TAIR: AT4G16680.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|I1LW02|I1LW02_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0148100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:25310649..25315017) extracted from Lotus japonicus Gifu genome v1.2.
CAACTGGGTCAACTGTAATGGGTTAGAGTTTCTAGACCTGTACGGCTGTACTCCACTTTATCTCTATTCCCTATATAATA CGTTAACAATTTCCTAAAAGTTGAGACAAAGATATCAAAGAAATCTAAACATGACGAGCTGTATCAACCTCAAAATATGG CTTCTCAACTTGACTATCTTTACCATGTTTGCTATCACCTATGGTGGGAGACATTTGTTAACTCAAAATCCTGAGTTTCA AGTGAAAGCAGTTAATCTAGGTGGTTGGCTGGTTACTGAAGGTTGGATGAAACCTTCTCTGTTCGATGGAATTCCAAATA AGGACTTATTGGTAAGTACATATCTATGCAGAAAGAAATTGCAATTCATATTATATTTATGGTTTCTTATTGTCATAGCC CTCTTCATATACATGGTAAATTTTTGTAGGATGGAACTGGTCTTCAGTTCAAGTCTGTTACGACAGGGAAGTATCTCTGT GCAGAGTCAGGTGGAGGAACAATCCTTGTTGCAAATCGCTCAACCGCTTCGGGTTGGGAAACATTTTCAGTGAGTGATTT TTGTTCATCAATTAATTAAAACTGGTTTTTGGAGTGAGATAGGTGTTAGATTTTGATGATGTTCCCTGTAATCTTGTAGT TGTGGAGGATAAATGAGAATGCTTTCAGATTCAGGGTGTTTAACAAACAGTTTGTGGGGTTAAATGGGATTAACGCAGTT GCTTTGACCAACACTCCCACTGATTCTGCAACTTTTGATGTCATTAAGGAAAGTGACAGTTCAAACCGTGTTCGAATCAA AGCATCAAATGGATACTACTTGCAGGTAATTAAATGTCCTTTCATTTTTTGTATAGAATGGAGTCTTTAAATGTTTGTTA TAAGTTGCTGAGGTATGTTTGGATCGATGATAAGGATAGGAATGAGGTTGGATGAAGTAGATTTTTAATGTTCTATTAAT TTTTGAGTATGTTAAATGAAGATGAGATGGAATTGTTCCATTACTTGCCATCAATTTTTGAGATTTGGAAAGAATGAGAT GGAATTGAGACATTGATAACTACTGATACTAAAATATTTTTTGTGCTGCTGTTTATATTATATATTCAATATTAGTGTTT CAAAAGCTGGGGTAATATAAAAATTTATATTAAAAAGGTAATATACAAAAAAAAGAACTACAAGGTGTGGCGTAGCGGTT AGCTCATCTTATTCTTTAATTATAAAGCTGGGGTTTGATTTTCGCTCATGAGAATATATTGTATTTCGTGAACAGCCATT TACCGCTTAGTCAAGTACATGCAGTGATAAAATAAGTAGTTGTTATCAGTGATAAGCTCTTTTAAAAAATTAAGGATAAA AAATGAATAATTCATGACTTCGACCCGAACAATGAAGTGATAAATTTATTTCACCATCTCATAAAATATTCAAACTACGA AATAATATTTTCATTATGTTGGATCTCATTCCATTTCGTTCTATTATATTTTATTTTGATCTGTTTGATTATGTTCAATA AAACCGAATATAGCCTAAGGGAAATCACAACACGTCCTCACTTTGTACGTGGGCTAGTCGCCCATAAAATTATTTTACAA TTGGGTAGATTTTAATGTACATTTCTTACTTTTTAAACAAGACATAATTTGAAAAGAGAAGACTAAGAAAGCCCTTTAGA CTTGAGGTCATGCAATTCGGCAAATCCATCTAACCTCAACTTGGAAGAATGTGACCAACAAGGATTATATTATAAACCAC TTGTTGTATGGATTCTTTGTCATTCATCAATTATTCTAAACCTTAAATTGTGAAGCACATGAATATTTTATTTTTTATCC AATTCTGATGGGGTGTAATAAATTTACAGGCAAAAACAGAGGTGCTGGTGACTGCTGATGTATCACATGTTAGCGGATGG CGTGAAGATGACCCAACAGTTTTTGAAATGAGAATCACTGGAGGGTTGAAAGGAGAATTCCAACTCACAAATGGTTATGG GCCCATAAAAGCACCACAAATAATGAAGGTAGTATTAAGATTAATTAATATATTTAAAGCCAAAGAATTGACCAGCAAGT TGCAGGTCAAGTACTCAAATTGGTAGTAAGCGTTGGAAGTCAAAAGAATTGTGTTTGCTTTTATCTAATAATTCTTCAAA AAAGCTTCTATAAAAAATAGAGTTTTATAACACTTGTTAACATTTCTTACATATAAATTTGTTCTGTTTGAGTCTTGGGT GTAAAAAAACTCACTAAAAGAGGTGTATATATATCCCCTTCAATTGTCTTTCGTGAAATATACATATGATATAAAGAAAA GAAGCAAAGTTTCATGAAACGTAGCTAACTTCTAGATGTTCAACTATTTACATGTTGATGTGTGAATGTTTGACGTTTTT TTCAGGAACATTGGAGCACTTTTATTGTAGAAGAGGATTTCAAGTTCATAGCAAATAACGGATTAAATGCTGTTAGAATT CCTGTTGGTTGGTGGATAGCAAGTGATCCAAGTCCACCACGGCCTTATGTTGAGGGTTCCTTGAACACACTAGACAATGC CTTCTTGTGGGCAGAGTGAGTCCATAAACTTTATTTTCTAGTATTTATGTGGCTTCAGCTAGATACAAAAAATGAAAATT AAAAGGCTCAGTTAATAACGAAATTCAAAACAATATTAATAGATTATTGATCTGGTGCAGGAAATATGGATTGAAAATCA TCATAGATCTTCATGCTGCACCTGGTTCTCAAAATGGCGATGAGCACAGCTCTTCAAGAGATGGTTCACTAGAATGGGGA CAATCAGATGAAACCATCCAACAAACAGTTCAAGTTATAGACTTCCTGACTGCCAGGTTTATATTACATATAGAACACTT TTATATAGACAAACCTTCATGTTTTAAACTTAAATGGTAACATCATGATTTTAAATTGTAGCTGATATCACATTGGCGGT TGCATCATAATATTTAAAATTAGGGGAGGGAGGAATGCAGCTAATGAAGTTGTAGCATACGGTTGTCCATACTAACTTCT GCGCTTTCCCTACGATCGATTTATATGTAGGATATTTCATCCCTCTTGCGAGTACTTTACCTTCCAATACTCGATCCAGG ACTCGAGCTACCCCAGCTAGGCACTTAGCCCTTAGGTCCTACAATTGATTCTCAGGAGGTAAAATAATCGCTAGAGGGGC GATGATATTTTCTACGTATACATTACAGGGCAAACTCAGAGATTGGTAACAGCCAATTTTACATAATTCATGAAAAACTT GGATATCACGATGGTAGTTGCAAAGCACAATTTAAAACCATTGTTATTTGCATTATATAATCAATTCTATATTGTTATGT GTTGTATGTAGATATACAAAAAGCCCAAGCCTTTATGCAGTTGCTCTTTTAAATGAGCCTCGCTCACCCGGTGCCACTCT AGAGAGCCTAAACAAGTACTACAAGGCTGGATATGAAGCAGTACGCAAACACTCCTCCAAAGCTTATGTTGTGTTTTCAA ATAGGTTAAGTTCCCCAGACCCTAGAGAATTCTTCAATGTTGCCAATGGCCTTACGCGAACTGTGATAGATGTTCACTAC TACAACGCTTTTGGAGATTTTTTTAAAAGCATGACTGCCCAACAAAACATTGATTACATTTACAACGATCGTAAAGCAGA GTTAAATTATCTTACAACTTCAAACGGTCCTCTAGTTTTGGTTGGTGAGTTTTCAAATGACCTTTCTTTATCCTTATGAA TACAAATATTTTTAATAGTTCATGAAATTTAACTGTGAATTTTATTTTAGAATTTACGTTATTCATTTATTTTAAATGTA TTCTGTACTAATTTTAAACCACATTAATTTCAATTCAAGGTGAATGGGTTGCTGAATGGCAACTCCAGGGAGCTACCAAA GAAGACTACCAAAGATTCGCCAAGGCCCAGTTAGATGTTTATGGGCAAGCAACATTTGGATGGGCTTATTGGAGTTATAA AAATTCCGTCAATCACTGGAGTATGGAGTGGATGATCAAAAATGGTTATATCAAGTTTTAGAAAGTTGTTTACCAAAAAC AAATTAGACAGTTTGTGATCCTCAAATAAAAAGGAAATTTACAAAGTTTTTTTTTATCTTTTGTGTAATCTTTTGACTAA TAAATAAACCAGCCTAACAACAACAAAGGCAAATGTAATAAGTCAGTTATTAGATCTTTTATTCAGTTAGTATATGCTTA GTTTGATGTATTATACTTAGTTTTAATGCTTCGTCCTCACTTCAACGTTGAGCATTACAAACTCAATCAAGATAGTTGAT TAGTGAATTGGGCATATGGGGGATTGATTCGCAAATCATAAAACTGGGA
CDS sequence (LotjaGi1g1v0148100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGAGCTGTATCAACCTCAAAATATGGCTTCTCAACTTGACTATCTTTACCATGTTTGCTATCACCTATGGTGGGAG ACATTTGTTAACTCAAAATCCTGAGTTTCAAGTGAAAGCAGTTAATCTAGGTGGTTGGCTGGTTACTGAAGGTTGGATGA AACCTTCTCTGTTCGATGGAATTCCAAATAAGGACTTATTGGATGGAACTGGTCTTCAGTTCAAGTCTGTTACGACAGGG AAGTATCTCTGTGCAGAGTCAGGTGGAGGAACAATCCTTGTTGCAAATCGCTCAACCGCTTCGGGTTGGGAAACATTTTC ATTGTGGAGGATAAATGAGAATGCTTTCAGATTCAGGGTGTTTAACAAACAGTTTGTGGGGTTAAATGGGATTAACGCAG TTGCTTTGACCAACACTCCCACTGATTCTGCAACTTTTGATGTCATTAAGGAAAGTGACAGTTCAAACCGTGTTCGAATC AAAGCATCAAATGGATACTACTTGCAGGCAAAAACAGAGGTGCTGGTGACTGCTGATGTATCACATGTTAGCGGATGGCG TGAAGATGACCCAACAGTTTTTGAAATGAGAATCACTGGAGGGTTGAAAGGAGAATTCCAACTCACAAATGGTTATGGGC CCATAAAAGCACCACAAATAATGAAGGAACATTGGAGCACTTTTATTGTAGAAGAGGATTTCAAGTTCATAGCAAATAAC GGATTAAATGCTGTTAGAATTCCTGTTGGTTGGTGGATAGCAAGTGATCCAAGTCCACCACGGCCTTATGTTGAGGGTTC CTTGAACACACTAGACAATGCCTTCTTGTGGGCAGAGAAATATGGATTGAAAATCATCATAGATCTTCATGCTGCACCTG GTTCTCAAAATGGCGATGAGCACAGCTCTTCAAGAGATGGTTCACTAGAATGGGGACAATCAGATGAAACCATCCAACAA ACAGTTCAAGTTATAGACTTCCTGACTGCCAGATATACAAAAAGCCCAAGCCTTTATGCAGTTGCTCTTTTAAATGAGCC TCGCTCACCCGGTGCCACTCTAGAGAGCCTAAACAAGTACTACAAGGCTGGATATGAAGCAGTACGCAAACACTCCTCCA AAGCTTATGTTGTGTTTTCAAATAGGTTAAGTTCCCCAGACCCTAGAGAATTCTTCAATGTTGCCAATGGCCTTACGCGA ACTGTGATAGATGTTCACTACTACAACGCTTTTGGAGATTTTTTTAAAAGCATGACTGCCCAACAAAACATTGATTACAT TTACAACGATCGTAAAGCAGAGTTAAATTATCTTACAACTTCAAACGGTCCTCTAGTTTTGGTTGGTGAATGGGTTGCTG AATGGCAACTCCAGGGAGCTACCAAAGAAGACTACCAAAGATTCGCCAAGGCCCAGTTAGATGTTTATGGGCAAGCAACA TTTGGATGGGCTTATTGGAGTTATAAAAATTCCGTCAATCACTGGAGTATGGAGTGGATGATCAAAAATGGTTATATCAA GTTTTAG
Protein sequence (LotjaGi1g1v0148100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSCINLKIWLLNLTIFTMFAITYGGRHLLTQNPEFQVKAVNLGGWLVTEGWMKPSLFDGIPNKDLLDGTGLQFKSVTTG KYLCAESGGGTILVANRSTASGWETFSLWRINENAFRFRVFNKQFVGLNGINAVALTNTPTDSATFDVIKESDSSNRVRI KASNGYYLQAKTEVLVTADVSHVSGWREDDPTVFEMRITGGLKGEFQLTNGYGPIKAPQIMKEHWSTFIVEEDFKFIANN GLNAVRIPVGWWIASDPSPPRPYVEGSLNTLDNAFLWAEKYGLKIIIDLHAAPGSQNGDEHSSSRDGSLEWGQSDETIQQ TVQVIDFLTARYTKSPSLYAVALLNEPRSPGATLESLNKYYKAGYEAVRKHSSKAYVVFSNRLSSPDPREFFNVANGLTR TVIDVHYYNAFGDFFKSMTAQQNIDYIYNDRKAELNYLTTSNGPLVLVGEWVAEWQLQGATKEDYQRFAKAQLDVYGQAT FGWAYWSYKNSVNHWSMEWMIKNGYIKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 7 | 26 | 20 | - | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| PANTHER | 16 | 507 | 492 | 7.0E-262 | ||
| PANTHER | 16 | 507 | 492 | 7.0E-262 | – | |
| Phobius | 27 | 508 | 482 | - | – | |
| SUPERFAMILY | 36 | 506 | 471 | 7.05E-93 | ||
| SUPERFAMILY | 72 | 186 | 115 | 1.96E-17 | ||
| Gene3D | 74 | 193 | 120 | 4.7E-19 | – | |
| Gene3D | 194 | 508 | 315 | 9.8E-85 | – | |
| Pfam | 222 | 490 | 269 | 3.1E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Biological process | Actin filament organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. | ||
| Molecular function | Actin filament binding | Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. |
Expression pattern of LotjaGi1g1v0148100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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