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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0148300 |
| Transcript ID | LotjaGi1g1v0148300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan 1,3-beta-glucosidase; TAIR: AT5G66460.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|I1LW02|I1LW02_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0148300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:25397427..25402759) extracted from Lotus japonicus Gifu genome v1.2.
GGGAAAGGACGGAGATGGACTTTGGTGCGGTGGAGGAATTTCAACTTCCATGTGAATACTCAAACTTTTATTTAATATAT TTTGCAATGTTAACGCAGCCTACTGCGAACTCTAATGGGTCAGAGTTTCTAGATTTAGACTCCACTTGATCTCTATTCAC TATATAATTAATGCTCTAACAATCTTCTAAACTTGAGACAAAGATATCGAAGACATCTAAACATGACGAGATGTATCAAC CTCAAAACATGTCTTTTCAACTTGATTATCTTCACCATATTTGTTATCACCTATGGTGGGAGATTAAATCAAAATCCTGA GTTTAAAGTGAAAGCAGTTAATCTGGGTGGTTGGCTGGTTACTGAAGGTTGGATGAAACCTTCTCTCTTCGATGGAATTC CAAATAAAGACTTCTTGGTCAGTGAAATATCTATAGGCTATAGCCAACAATATTTGCATTTCAATTAATTTATGGGTTCT TATTTTCATGGCCCTCTTCATACATGATCATTTTTTGTATAGGATGGAACTGGTCTTCAATTCAAGTCTGTTACAACAGG GAAGTATCTCTGTGCAGAGTCTGGAGGAGGAACTATCCTTGTTGCAAATCGCTCAAGTGCTTCGGGTTGGGAAACATTTT CAGTGAGTGACTTTTTATTCATCAATTGAAACTGATTTAGTTTGTGTTAAAAAATTGATGTTGCATGTTTCATTTTGTGT AGTTGTGGAGGATAAATGAGAATACTTTCAGATTCAGGGTATTCAACAAACAGTTTGTGGGGTTAGATGGGATTAACGTG GTTGCTGTGACAAACACTTCCACTGATTCTGCAACTTTTCATGTCATTAAGGAAAGTGGCAACTCAAGCCTTGTTCGCAT CAAAGCATCAAATGGATACTTCTTGCAGGTAAATCCTCTGCATTTTGCCTTTTTCTTTAGTGTTTATTTTTTTTGATAAT GTTCTTTAGTGTTTATTGTAAGTTGACGCACAAACCAGTGATATTTTAATGTTTATTATAAGTTGAAAATGATCCCTTCA AAATTTTCAGCAAATGTGACCAATAAGGATTAAATTATATACCACTTGGTTGTATAGAAAATGCTCCCCCAGTACACAAT CAGCAAATGAAAATAGCTTATAAGAAAATGCTCCCCGTAAATAATGGATCTATTAATTATCCCACATGTGCATAATATCG ATAAACATGCATATTTTCATAGGATGTCATTTTTAACCATTAATAAGAGAGCTCTTTGCAACCAACTTAGATGGACACAA CTAGTCACGAATAGATTCTGGTTTAACTTTCACATTTTCATGGATCCAAAATTTAAACTTCTGCGTCGAGTTGAATGTCA ATTGGACGAATAATCATCTCTTCACACCTTACTTTTGAGGTGTGTAGAGGTGGAGGAAGAGAGCGATAAAAAGAAAGAAG AGAGAAAATAAAGATGTGATAGATAATTTGATTGATAAATAAAAGAAAAATAAATGAAAATAAAGGTGGAAAAAAAAGTG GAAAAATATGTATATATCATAACTCAATGACATTTCTCTAGCTAGAAGATCCTTTTACACCACTACCTAAAAGTAAACCT AAGCTAGACAAACAACATGTCACTCACACCCTACCTAATTGTCTAAAGATGTTTTATCTCTATTCTACCATTTTTTTTTA ATAAAAAATATGAGGACAAATCCGTCTAACCTTAATTTGGAAGAATGTGTCTAACAAGGATTGATTACATTATATACCAC TACTCCTTGTTGTATCAATAATGTTACTTACACACCTCTCATTTGAGGTGGAAGAGGTGGAATGAAGAGAGAGATAGGAA GAAAAGAAAAAGTAAGAGAGAAAAAGTATGAGATGTGATAGATGATAAGATGAGAGATAGAAACAAAAAGAGGTGGAAAT GAAGTGTTTAAAAAATGAGATGTGTGTATACATCATTACTCCTTGTTGTATAGATTCTTAAATCTTTGTCATTAATCATT TGTTCTGAACCTTAAATTGTGAAGCACGTGAGTATTATTTTTTTTACCTAAGTATTGATTGGGTGGAATTAATTTATAGG CAAAAACAGAGGTTCTAGTAACTGCTGATGTATCAGAGGTCAGGGGATGGGGAGAAGACGACCCAACTGTTTTTGATATG AATATCGCTGAAAAGTTGCAAGGAGAATTCCAAGTCACAAATGGTTATGGACCCATAAAAGCAAAACAAGTTATGAAGGT AACATTAAATAAATGAATTGACTTATTGACATGACCCAAAAATTGATAGACCACTTGAAATTGAAAACTAGCTGCAAGCT TAATTATTGATTTATCACCTCATTTCAACCTTCGGGTTCACATATGAGATTAAGACTTGTATATGATACAAGTGGGAACC TATTTTTGGATGGAGTTATCTAAATGACTAATATGATAATTTTATTTAATACTAATGAATTAATATAATTATTTGTAAAT AATAAATATTTTAAATTAACTTATCTTAAATATTATTGGTCTACTAGTCATGAGTAAAATTATCCACATTGGATCATATT TTTTGATACTAATGGATCGAGTGAAACCTGTACAACTTTTATTTGAAATTTTAATAAGAGTTTGATTTTGCTTGTATCTC AAAATAAATGTTAATGTCTTGGAATAGTGTCAACATGAATTCAAATATAACCGAAATCCTCTATCTAGCATGTTGTTATG TGAATGCTTGATGGTGTGACTTTTCTCAGGAACATTGGAGCACTTTTATTGTGGAAAAAGATTTCAAATTCATAGCAAGT AATGGATTAAATGCTGTCAGAATTCCGGTTGGTTGGTGGATAGCAAGTGATCCAACTCCACCTTCTCCTTATGTTGGGGG TTCCTTGAACGCACTAGACAATGCCTTTATGTGGGCAAAGTGAGTTCAGAACCTTAATAAATTCCTTTGTCTAGTATTTA TATGGCTTTAACTAGATTCTAAACCGAAGATGGTGTGGTTCATAATGATTACTTAAATGATAACAATGGGATTATTGGTC AACTTGCAGAAAATATGGATTGAAAATCATCATTGATCTTCATGCTGCACTTGGTTCTCAAAATGGCTATGAGCACAGTT CTTCAAGAGATGGTTCTCAGGAATGGGGAGTAACAGATGAAACCATCCAACAGACAGTTCGAATTATAGGCTTCTTAACT TCCAGGTTTTTATTGCATATGGAGAACTTCTTTCATGTTTTAAATATAAATGGTAGCCTGATGTTTTTAAATTGTGGTTG GGAGGATAACAGTTGTTGTTGCGTCAAAATTCTTAAAATTGGGGTAAAATGCGACAAGTGCATTCATAGTTATAGTTGAA AGGACTTGAAAAACTTTGATATCAAGATTGCAGTTGCAAACCACAATTTATATTCATTGGTATTTGGATTATATAATCAA TTTTATATTGTTATGCATTGTATATAGGTATGCAAAAAGCCCTTGTCTTTATGCAGTTGAACTCTTAAATGAGCCTCGCT CACCTGGTGCAACACTAGAAAGTTTAAATAAGTACTACAAGGCTGGTTATCAAGCAGTGCGCAAGCACTCCTCCTCAGCT TATGTGGTGTTATCAAATAGGCTAAGTTCGCCAAACCCTAAAGAATTCTTCCCTGTTGCCAATGGCCTCAGGCGATCAGT GATTGATGTCCACTACTACAGTGTTTTCGACGATTTATTTACCGACATGACTGTTCAACAAAACATTGATTACATATACA CCAACCGTTCATCTGATTTGAATTTTGTTACAACTGCAAATGGTCCTCTGGTATTTGTCGGTGAGTCTTCAAAAACCCTT CTTTATCCCTTATGAATATAGATTGATTTTTGCAGTCATTTTACAATAATGCTTATCATTTCAGTGATAATCTAAATCTA ATCAATCAAGCGAGATAATTTTATGAATCATCTGATTAAAAAGATGCAAATACGTAATTTATCAACCGTGAACATTGATT TAGTATACTTTTCCAACAATAGAATACATAATAGCTTAAATGTATTAAAGATGTTTTACTTCATGAAATTAAATTATAAA AGCTTATGCTCTTATATGTAATTGATTTTTTTGTCACCACAACAAATCAAATGATAACTGTGGATTTTATTTTAGAATTT TTTGTTATTCATTTATGTATTTTAGAATTTATGTTATTGATTATTTTAATTAACATTAATTTCAATTCAAGGTGAATGGG TTGCTGAGTGGAAAATTAAGAATGCTACAAAAGAAGATTTCCAAAGATTCTCCAAGGCCCAGTTAGATGTTTTTGGGCGA GCAACGTTTGGATGGGCCTACTGGGCTTTTAAAAATTCTGACAACTACAAGCATTGGAGTCTGGAGTGGATGATCAATAA TGGTTACATCAAGCTTTAAATAGTTGTTAATCAAACAAAAACGAACTTTAGAAAGTTTCCTCTTGCTTTTTTGGATATTT TGTGTAATTTTTTGGAACCCTCATCTTTTTTCAATTTAGTGCTACTCTTTTTTATCTAACTAAGGCTTAAATCTGTGATT ATTTAAAAAGAAATTTTTAGAACTTAATCTTTATGAAATCACTATTTGATCAAATGAATACCAAAAGATGGGTTGATTCA ATTTTCTCTACAAATTCTTTCAAAAAAAAAAGAACTTAAGCTTGGATCACATATGTCCCAACAATATAATTTAAAGTACT CAAATTAATGATTGTATAATGTGTCTTCTGGTTCTTCCATAGTGAGTTGTGGTTTTAGTGAAGGTTGTCCTTAAGAAGTT AGCTAAAACATGTTGAAGGATACTGCTCTGGTTGGTCCGAAGGACCACACGATCCATCATCGTCCTGGTTGGTCAAAATG ACTACACTACCAAGTGACCGTCAAGCTGATCAGCTACGACGACCAAACACTGAATTTCCACTTTTTGACTAAATGACTAC ACTATTAAGTGATTGTCAAACAAATAGAATAGAAGATCAAGTTCACCTAAGTTAGGTCGATATCTCAAATACTGGCTACT AAATGGTTTGGCAAATGTAAACACTTCTATCATTGTTTACTCCAACCACTAAATACACATGTTTAATCACATTGTTAGCT AAGCATGACTAATATTGCTCTTATAGACTTAGAAAATTCTCTTTCTAATCCAAAGCTGACTTTGGCATTAGAGTGTCTTT GGCAAGCACATGCTCTCTCAGTCGTGCACACCATATACACCCTAGGCTTGACCTGAGAATTATATTGCTGAGATTTTGAA AGAATCGTATATGTAAAATCATGTAAATCAATTCTTATTACCATGGTTTCAAC
CDS sequence (LotjaGi1g1v0148300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGAGATGTATCAACCTCAAAACATGTCTTTTCAACTTGATTATCTTCACCATATTTGTTATCACCTATGGTGGGAG ATTAAATCAAAATCCTGAGTTTAAAGTGAAAGCAGTTAATCTGGGTGGTTGGCTGGTTACTGAAGGTTGGATGAAACCTT CTCTCTTCGATGGAATTCCAAATAAAGACTTCTTGGATGGAACTGGTCTTCAATTCAAGTCTGTTACAACAGGGAAGTAT CTCTGTGCAGAGTCTGGAGGAGGAACTATCCTTGTTGCAAATCGCTCAAGTGCTTCGGGTTGGGAAACATTTTCATTGTG GAGGATAAATGAGAATACTTTCAGATTCAGGGTATTCAACAAACAGTTTGTGGGGTTAGATGGGATTAACGTGGTTGCTG TGACAAACACTTCCACTGATTCTGCAACTTTTCATGTCATTAAGGAAAGTGGCAACTCAAGCCTTGTTCGCATCAAAGCA TCAAATGGATACTTCTTGCAGGCAAAAACAGAGGTTCTAGTAACTGCTGATGTATCAGAGGTCAGGGGATGGGGAGAAGA CGACCCAACTGTTTTTGATATGAATATCGCTGAAAAGTTGCAAGGAGAATTCCAAGTCACAAATGGTTATGGACCCATAA AAGCAAAACAAGTTATGAAGGAACATTGGAGCACTTTTATTGTGGAAAAAGATTTCAAATTCATAGCAAGTAATGGATTA AATGCTGTCAGAATTCCGGTTGGTTGGTGGATAGCAAGTGATCCAACTCCACCTTCTCCTTATGTTGGGGGTTCCTTGAA CGCACTAGACAATGCCTTTATGTGGGCAAAAAAATATGGATTGAAAATCATCATTGATCTTCATGCTGCACTTGGTTCTC AAAATGGCTATGAGCACAGTTCTTCAAGAGATGGTTCTCAGGAATGGGGAGTAACAGATGAAACCATCCAACAGACAGTT CGAATTATAGGCTTCTTAACTTCCAGGTATGCAAAAAGCCCTTGTCTTTATGCAGTTGAACTCTTAAATGAGCCTCGCTC ACCTGGTGCAACACTAGAAAGTTTAAATAAGTACTACAAGGCTGGTTATCAAGCAGTGCGCAAGCACTCCTCCTCAGCTT ATGTGGTGTTATCAAATAGGCTAAGTTCGCCAAACCCTAAAGAATTCTTCCCTGTTGCCAATGGCCTCAGGCGATCAGTG ATTGATGTCCACTACTACAGTGTTTTCGACGATTTATTTACCGACATGACTGTTCAACAAAACATTGATTACATATACAC CAACCGTTCATCTGATTTGAATTTTGTTACAACTGCAAATGGTCCTCTGGTATTTGTCGGTGAATGGGTTGCTGAGTGGA AAATTAAGAATGCTACAAAAGAAGATTTCCAAAGATTCTCCAAGGCCCAGTTAGATGTTTTTGGGCGAGCAACGTTTGGA TGGGCCTACTGGGCTTTTAAAAATTCTGACAACTACAAGCATTGGAGTCTGGAGTGGATGATCAATAATGGTTACATCAA GCTTTAA
Protein sequence (LotjaGi1g1v0148300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTRCINLKTCLFNLIIFTIFVITYGGRLNQNPEFKVKAVNLGGWLVTEGWMKPSLFDGIPNKDFLDGTGLQFKSVTTGKY LCAESGGGTILVANRSSASGWETFSLWRINENTFRFRVFNKQFVGLDGINVVAVTNTSTDSATFHVIKESGNSSLVRIKA SNGYFLQAKTEVLVTADVSEVRGWGEDDPTVFDMNIAEKLQGEFQVTNGYGPIKAKQVMKEHWSTFIVEKDFKFIASNGL NAVRIPVGWWIASDPTPPSPYVGGSLNALDNAFMWAKKYGLKIIIDLHAALGSQNGYEHSSSRDGSQEWGVTDETIQQTV RIIGFLTSRYAKSPCLYAVELLNEPRSPGATLESLNKYYKAGYQAVRKHSSSAYVVLSNRLSSPNPKEFFPVANGLRRSV IDVHYYSVFDDLFTDMTVQQNIDYIYTNRSSDLNFVTTANGPLVFVGEWVAEWKIKNATKEDFQRFSKAQLDVFGRATFG WAYWAFKNSDNYKHWSLEWMINNGYIKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 7 | 26 | 20 | - | – | |
| TMHMM | 9 | 26 | 18 | - | – | |
| PANTHER | 13 | 508 | 496 | 1.0E-265 | – | |
| PANTHER | 13 | 508 | 496 | 1.0E-265 | ||
| Phobius | 27 | 508 | 482 | - | – | |
| Gene3D | 28 | 79 | 52 | 1.6E-7 | – | |
| SUPERFAMILY | 34 | 506 | 473 | 3.23E-90 | ||
| SUPERFAMILY | 70 | 184 | 115 | 8.5E-17 | ||
| Gene3D | 80 | 185 | 106 | 1.8E-10 | – | |
| Gene3D | 188 | 508 | 321 | 5.7E-83 | – | |
| Pfam | 219 | 489 | 271 | 3.8E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Biological process | Actin filament organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. | ||
| Molecular function | Actin filament binding | Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. |
Expression pattern of LotjaGi1g1v0148300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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