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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0158600 |
| Transcript ID | LotjaGi1g1v0158600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT1G21780.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9XHZ8|Y1178_ARATH BTB/POZ domain-containing protein At1g21780; TrEMBL-Plants: tr|I3T1G3|I3T1G3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0158600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:29403874..29407465) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGTATTTCGTAACTTATTTATGAATAATGTTTAGTTCCCCATCCATTTTCACTTCCACCTCTTTAAAATGTGAAGAT AAGTGAGAGAAATAAGTGATATGATATGCGATGTGACAAAAAATGCAGAGAGAGATAGAAGAGAAATGAGTGAAAAAAAT ATGGAAGAGAAAGTGAGTTGTAAATATATCATTCCTCTAAGTTAGTTAAAAAAAAAAAAAAAAGATGAATCGAACATAGA GCTAAGTTCAATAAAAAAAGAACATAGAGCTAAGGAGGAATGAAATGGTAAATTGGTAATAGTGTAATACTATATTCTAC GACTAACAAAGTGACGGTGCCCATCAAAGTCATCACAAACTTTACTTTAGTCCAACCGAAGACACTATTACACAGAGTCC ACTCTCGGTAGTTCACACTTCCCACTCACTCTACAACCATCCATGGCGGATTCCAAGGTCGAAACCATTTCCCGTTTAGC TCAATGGAGAATCGAGAATTTCGGACCCTGTTCCTACAAGAAATCCGAACCTTTCAAGCTCGGAATTTGGAACTGGTACA TACTTCTTCTATCATCCATCTCATGATGATGTTGTTCCTGCGTTGAAATTCAGCTTGATTAATATTGAATTGGTTCCATT TTTCAGGTACATGTCCATAGAGAGAAACAGGTACCTGTATATCCATATTTTCCCAGAGCCTTCAAAGCTTTCTAAGGAGC AACCACCTGTGGCTCGTTTCATTCTTCGTGTCTCCAGCACTGGCTCCACCCGTAGATTTTATATTTCTCCTGGTTTGTTT TCTTCTTCCTCTTGTTTCTGGTGTGTTTTGCCTTGATGGGTGTTTGTCAAAATTTGATCTTGCTGCTGATATTGGAAGAA ATGAATGAGCTTTTAGAAATAACTCAGGGTTTTATTTTGTTTATAGTTTGAGATTTTGGGAGTTTAATTATTAGTGGGAA ATTATGTGAGCACAATTCCTCTGGGTGTTGATCTGTGTGTGAGCTGTGATTGAAAGGGACAGGGGTTGAGGGTATTAATT TCATCAAGATAGGATTGAATATATTGATTGAGACTTTGATTTTTGGGTAAGATTATTTTTTTTCTTTCCTTTAGTCATTG CTATGTGGCTACTGTTACTAAGGGATTCATCACAAAGGGTCTCCACTAGAGACTGATTAGGGAATAGGATAGTTTGAAGA AAGGAGGCTTTTATTCTTTATTTTTTTTGAGGTTTTGATGTTTTGATGTTTTATGGTGAGTAAATCCTTCTACCATTGAT TGTAAAGTCAAAATCAATTTTGAGGAGAAGCGGAGAAGGTCAGAAGCTTCTGTGAGTAGCTTTTGAGTTTCATAATTGAT TATGAGGAAAAACAATTTGATCCAAACATGCTAGAAATTGGATAAGATGGAGTGCTGTAAAGTTACTATTCTATTGTTTG GATGTTTGATGGAACATAAATAAAGAATATTCTGTGAGAAGTTTTGGAGTTTCATAATTGATTATGAGGAAAAAAGAAGT TGATCTAAACATGCTAGAAATTGGATAAGATGGAGTGCAATGAAGTTACAATTTTATTGTTTTTGTGATGGAACAGAAAT AAAGACTGGTTTCATCCTGGTTTTTATGTTGTATTGCATTCATATCGTTAGTAGCTACCAAGGTTTCATGTTGGTGGCCG TAACATCTCGGTTGTGGCCACCACAATCACATCCGGCTGTGATTGGGAATAGCATCAGGATTGTATCAGCCTGTAATGTG ACCACGGCCACAATTCAGAACCATGGTTGCTATTAAGTAGGGACTTTTTTGATGGGCTTACACAAGCAGAACTGCAGCCA ATAATTATGATGAAAATCTTTTAGCAAAGAATTGATTTGGGTGGTGATTACCTTCTAATTTCTCACCCCTTCTTGTTACT TCTCTTCACTAAGTTAGCCTTTTGGTTTTTCTGGAAATGATAAGTTTAGTTATGAAAGCTTTGGAAACAATAGGAACTTA TGAAGCATGGGGAACATTAGTATCTTAGAAAATATTCCAATTCTTTATTATTCTTGTAAATAAAAGGTCGATTCTAGATT TCCAAGTTAGTAACGCAAGCTTCAAGTTTCCTTTTCAATTTCACTAATTTGAGACATCAGGCTTTTCCTTTATACCTTGA GTTTTGGCCCTATGACATCGATTTCGTATATCTGCTGTTGCACACACACTCTTCACTTCTATTTACCAACAAGAAATATA GGCATAGTATTGATCGTGCATACCCCCATTGCCAACCAAGAAGTATGAAATTGCATTTACCTCTAGCGAGTAACTAGTTC AACATTGTATGATGAAATGCTGACTCAGGTTGGGTCTTCACTTATATGTGCTTGTAATGCCGCAGTTCATGAAAGGGTGC TTAGAACAAGTGAGGACTTTGTCTGGCCTGTGGATACAACATTCCTTGGTCGCTTCATCATTGATGTTGAATTTCTTGAC CTGAAAATCTACCCTACGAGTGTGAGTCCGTAACTTTTATTGTCATTACTATGTTAATCTGATATTATGCAAACAGATAA TAATAAAAATTTATGCACAAATATAATGATGTTTTTTTTTTCTCTTCTATCTGTTCATAAAGTATTGGTACACGTTACTT TCTTAGCAACTTATCGTGTTTGGTGACGCGCATTATCCCCAGGAAACCTCTGAGCTAGTATTAGATTGTTGCTTCTTAAC AACCTTTGTTGATTTCAGGGTGGAGTAGCCGGTTCCATATGGCCATCTGACGGAAAACTGCAATCTGTTGCATCTCAAAG CGCTCTCCGATGCCTCTCCCGCATGCTTGACGAGGAAATACACGCTGACCTCACCATTGTCACCGCAGATGGTACACTGA GAGCCCATAAGGCAGTTTTGTCTGCAAGCTCCCCTGTGTTTGAGGGCTTGTATCATCATCAAGACGTCGTTGATGATGAA AAAGAGACCTCTACAATCCACATGGAAGACATGTCACAACAATCCTGCAAGGCCCTTCTGAGCTACTTGTACGGCACAAT AAAACATGAAGATTTCTGGAAGCACAGGCTTGCGTTGCTCGGAGCAGCCAATAAATTCGAAATTGGTGATCTCAAAGATG CTTGTGAGGAAAGCCTGCTGGATGATCTTACCTCAGGAAATGTTCTCAGCAGGCTAAATGAGGCTTGGCTGTACCAGTTG CCCAAGTTAAAGAAAGGATGTTTCACATTCTTATTTGACTTTGGCAAGATATATGATGTTAGAGAGGAAATAAACAACTT TTTTCTCCTTGCGGAGAGGGAGCTGATGATGGAGATGTTTCAGGAAGTGCTTACTGTTTGGAAATAGTTTACCATAGAAC TCTTGGCTCCCCTGTATCTTGCAAATGATGGATCTGTTTGTATAAATCATGTTTTTAATTTGTAGTACAATATAAAATGT ATAATATATATACTGTAATGTAGATAATGCTACCATATTTAACAATCTAGCGGTTAAAGTGTCAAATGAAGGAGAGTGCA TTGTTCTATATATAATGGCAAGTTGATTTTGATTGGTTATTCTACTTCAGGTTTCTTCTTAGACGATATTCC
CDS sequence (LotjaGi1g1v0158600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATTCCAAGGTCGAAACCATTTCCCGTTTAGCTCAATGGAGAATCGAGAATTTCGGACCCTGTTCCTACAAGAA ATCCGAACCTTTCAAGCTCGGAATTTGGAACTGGTACATGTCCATAGAGAGAAACAGGTACCTGTATATCCATATTTTCC CAGAGCCTTCAAAGCTTTCTAAGGAGCAACCACCTGTGGCTCGTTTCATTCTTCGTGTCTCCAGCACTGGCTCCACCCGT AGATTTTATATTTCTCCTGTTCATGAAAGGGTGCTTAGAACAAGTGAGGACTTTGTCTGGCCTGTGGATACAACATTCCT TGGTCGCTTCATCATTGATGTTGAATTTCTTGACCTGAAAATCTACCCTACGAGTGGTGGAGTAGCCGGTTCCATATGGC CATCTGACGGAAAACTGCAATCTGTTGCATCTCAAAGCGCTCTCCGATGCCTCTCCCGCATGCTTGACGAGGAAATACAC GCTGACCTCACCATTGTCACCGCAGATGGTACACTGAGAGCCCATAAGGCAGTTTTGTCTGCAAGCTCCCCTGTGTTTGA GGGCTTGTATCATCATCAAGACGTCGTTGATGATGAAAAAGAGACCTCTACAATCCACATGGAAGACATGTCACAACAAT CCTGCAAGGCCCTTCTGAGCTACTTGTACGGCACAATAAAACATGAAGATTTCTGGAAGCACAGGCTTGCGTTGCTCGGA GCAGCCAATAAATTCGAAATTGGTGATCTCAAAGATGCTTGTGAGGAAAGCCTGCTGGATGATCTTACCTCAGGAAATGT TCTCAGCAGGCTAAATGAGGCTTGGCTGTACCAGTTGCCCAAGTTAAAGAAAGGATGTTTCACATTCTTATTTGACTTTG GCAAGATATATGATGTTAGAGAGGAAATAAACAACTTTTTTCTCCTTGCGGAGAGGGAGCTGATGATGGAGATGTTTCAG GAAGTGCTTACTGTTTGGAAATAG
Protein sequence (LotjaGi1g1v0158600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADSKVETISRLAQWRIENFGPCSYKKSEPFKLGIWNWYMSIERNRYLYIHIFPEPSKLSKEQPPVARFILRVSSTGSTR RFYISPVHERVLRTSEDFVWPVDTTFLGRFIIDVEFLDLKIYPTSGGVAGSIWPSDGKLQSVASQSALRCLSRMLDEEIH ADLTIVTADGTLRAHKAVLSASSPVFEGLYHHQDVVDDEKETSTIHMEDMSQQSCKALLSYLYGTIKHEDFWKHRLALLG AANKFEIGDLKDACEESLLDDLTSGNVLSRLNEAWLYQLPKLKKGCFTFLFDFGKIYDVREEINNFFLLAERELMMEMFQ EVLTVWK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 327 | 327 | 3.9E-172 | – | |
| PANTHER | 1 | 327 | 327 | 3.9E-172 | – | |
| Gene3D | 135 | 291 | 157 | 6.6E-31 | – | |
| SUPERFAMILY | 143 | 260 | 118 | 1.45E-19 | ||
| Pfam | 153 | 259 | 107 | 4.3E-20 | ||
| CDD | 160 | 245 | 86 | 2.45846E-14 | – | |
| ProSiteProfiles | 161 | 223 | 63 | 14.791 | ||
| SMART | 161 | 262 | 102 | 1.5E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0158600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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