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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0180900 |
| Transcript ID | LotjaGi1g1v0180900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT1G27500.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4HSX9|KLCR3_ARATH Protein KINESIN LIGHT CHAIN-RELATED 3; TrEMBL-Plants: tr|A0A0B2REY3|A0A0B2REY3_GLYSO Nephrocystin-3; Found in the gene: LotjaGi1g1v0180900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:35234636..35238800) extracted from Lotus japonicus Gifu genome v1.2.
TATTGGTCCAAAATGAGAAAAAAGTAGAATAATGCCACGTGGCATGATGAGGATAGGTTGACAAAGAGGAAAAAAGCAAA CAGAAGAGAAACACACGGGTCGGCGTGGTTACTGGTTAGGGAAGAAAGAAAGAAAAAAATCGTGTTCATCTCCATCTTCT TCTTCCCTCCTCTTTCTCTTTCTGACATCTCAGTTCTGCAAAATTCCTTTTTTTCAAACTTTAATTCCTTTCCACATTAA ATTATTTATTCTTATTAAATTGACCCTGAGTTCCCCATTTTACCCCCACCTTCCCCATTCTTCACCTTCTGTTTCATTCA TTCATTCATTGATTCAATCTCTCTTACCATAAAAAGGGTTCTGAGTTTTTCACATCTGTGTCTCTCTGCAACCAACCGAC AATACAGACTCTGTTCTCATCACACATACATGCCCCTTTTTTAAGGTTTGTGTCATTTCCCTTGTTCTTTCTATTGTTGG AATCTGTTTTTTCTTATGTCCCTCAATATTATTTGTATTATTGCTTTCTTTTCAATGGGTTCATAGCTTTTTTTTTCTGG GTTTTGACTTTTTTTTTTCCCTGTGCTGAAAAGTGAAAACCTTTTCCATTTTTGGGATGGGAGATTCAATGGGTATTGTG TGATTATCCCTGATGAAAGGTGAAGAAAAACTTTGACTTTTGCATATTGTGGCTTGAGTTGTATTGAATGAGCTTTGAAT TGAATGGGAAAATGCATTGAACGTGTTGTTATCGTTTATTTAATGTTGTCAGTTGCATTTGCATTTGCATTGTCTTTTAA CTCTTATTGTGTGTGTTTGTTTGTAGGGATTATTGGTTCATCTTTGTTGGATCTATTGTGATCTTTTTTATTTTGTAGAT TATGTGTTTGATATTGGTTCTGACAGGAATTTTGGTTCCAGGAAGAATTAAAGATGCCGGGGATTGTTACAAATGGGGTT TGTGATGGGGCAGTGAATGAGATGAATGGTAACCATTCACCCTCAAAGGAAACCTTAGCTCCAGTCAAGTCCCCTAGGGG TTCCCTGAGTCCACAGAGAGGCCAGAATGGAGGACCTAATTTCCCAGTTGATGGGGTGATTGAGCCGTCGATTGAGCAGC TCTATGAAAATGTGTGTGACATGCAGAGTTCTGATCAGTCACCCTCAAGGAAAAGTTTTGGATCTGATGGTGATGAGTCT AGGATTGATTCGGAGTTGCGCCAGCTAGTTGGAGGACGGATGAGGGAGGTGGAGATAATGGAAGAGGAAGTGGAAGTCGA GGTGGAAAAAGAGCGGGGAGGGAGTTCTAGTGGTGAAATTTCTTCTGGAGTGGGTGGTTTATCATCCAATGAAAAGAAGT TGGATAAGGTGCATGAGATTCAATCTGCAACTACTAGTTCTGTTTCCACAGAAAAATCTGTCAAAGCATTGAACTCACAG TTGGATGCTTCACCTAAATCAAAACCCAAAGGAAAAAGTCCTCCTGCAAAAGCTCCTTTGGAAAGAAAGAATGATAAGCC TCTATTGAGAAAACAAACTAAAGGAGTTGCTAGCGGTGTGAAGAGTTTGAAGAGTTCTCCTTTGGGAAAGTCAGTGTCGC TGAATCGAGTTGAGAATTCAGCCGAATCAGCCTTAGATAAACCAGAGAGGGCACCAATATTGCTAAAGCAAGCAAGAGAT CTGATTTCATCAGGAGATAATCCACAGAAAGCTCTTGAATTAGCTCTTCAGGCAATGAATCTTTTGGAGAAGCTTGGTAA TGGAAAACCAAGTTTGGAGCTGGTTATGTGTTTACATGTTACTGCAGCAATCTATTGCAATTTGGGTCAATACAACGAGG CAATTCCAATTCTCGAGCGCTCGATTGAGATTCCTGTTATTGGGGAAAGTCAGCAGCATGCCCTTGCAAAATTTGCCGGT CACATGCAACTGGGAGACACCTATGCTATGCTGGGCCAGCTTGAGAATTCAATTATGTGCTACAGTTCTGGTTTTGAAGT CCAGAGGCAGGTTTTGGGAGAAACAGACCCAAGAGTCGGCGAAACTTGTCGATACGTGGCTGAGGCTAATGTTCAAGCTT TGCAATTCGATGAAGCAGAGAGGCTCTGTCAGATGGCTCTTGACATTCATAAAGCAAATAGTTCAGCCCCTTCACTTGAA GAGGCTGCTGATAGGAGGCTCATGGGCCTCATATTGGATACAAAGGGAAATCACGAAGCGGCTCTCGAGCATCTTGTTTT AGCCAGCATGGCAATGGTAGCAAATGGCCAAGAAGTGGAAGTGGCTTCTGTTGACTGCAGCATTGGAGACACATACTTAT CCATGTCCCGATATGATGAGGCCGTCTTCGCGTATGAGAAAGCGCTAACAGTTTTCAAGACTGGAAAAGGAGAGAATCAT CCTGCTGTCGGATCAGTCTTCGTACGTTTGGCTGACTTGCATAACAGGACAGGGAAGATAAAGGAGTCGAAATCATATTG CGATAGTGCACTTCGAATATACGAGAATCCAATGCCTGGAGTTAATCCAGAGGAGATTGCTAGTGGTCTTACGAATGTTT CGGCCATCTATGAATCAATGAATGAGCTTGAAAAGGCACTCAAGTTACTTCAGAAAGCACTGCTGATATATAATGACAGC CCTGGACAGCAAAGCTCAATAGCAGGGATTGAAGCTCAGATGGGGGTCATGTACTACATGCTGGGGAACTATACTGAATC TTACAACACATTGAAGAATGCTATTACGAAGCTTCGTGCGATCGGAGAGAAGAAATCGTCATTCATTGGAATTGCTCTTA ATCAAATGGGACTTGCCTGTGTACAGCTTTATGCCTTTGGTGAGGCTACGGAATTGTTTGAAGAAGCAAAGAGTATTTTG GAACATGAGTATGGACCTTATCACCCTGAAACGCTTGGGGTTTATAGTAATCTTGCTGGCACATATGATGCAATTGGCAG GTATCTACCTTCTTTCTTCCCTGTTCTATTTGCAAATCTGGCATTCTTTTTTTTTTTCTCTCTCTCTCTCACTATTAGAG CACATGCAGCATTTTCAATTTATTGTGACATTAAGCAATAGTAGTATTTATAAATTTACAGGCTGCCTAATCTTGTCATG CTTCCCAGATGAATATAATTAAGGCCCGTTTGAAGACCTTACTTAAGCTTATCTTATAGCATAAGCGCTTATGAAAGTGT TTGGAAGAACTTATGTAAATAACTTATGACCTATCCATAAGTTGTTTTTATTTTCATAAGGTGCTTAGATTAACTTATGA ATAAGCACTTAAACTTACCTATAACCTATTTTGAGCTTAATTCAATAAACTTCTCAAATTAGCTTATAAATAAACGTTTA TCCGATAAGCGCTTATTTCAATAAGCTGTTTACTCAAACTCCCTCATGCTTAATCAAGTCATGCCGCTCGTGTGAAATGA TGACTGGTTTTCATTGTGGTATTCATAGGGAAAAGTTAGTTTGCTAGCATTTAGTTAGCAACTTAAACAAAGACAGATTA AGAACGACCGCGTTAGGGTTGTGTTGCGGTCCTTCGTATTGCGGAAAATTGTGAATAAACATGGTTGTCGTAGCTGAAAT CACGGTCACAGACCTTGATTTAAAACCATGATTATGGGTCTTTTAGATTATCCAATATATTGTTAGGTGTATATTATAGA GGTTATTTTGTACTCATGGGGTTTGATCTTCTTCGATTTCAGGCTGGATGAGGCAATTCAAATTCTGGAGTATGTTGTTA GTGTGAGGGAGGAAAAGCTTGGAACAGCAAATCCTGATGTTGATGATGAGAAGAGAAGGTTGAGTGAGTTGTTGAAAGAA GCAGGTAGAGTTCGGAGCAGAAAAGTCATGTCACTTGAGAACCTTCTTGATGCCAATGCTCGCATTCCAAACATCAACCT TGTCATCAAGGCCTGATAAGGATGTCAAATTTATGGGGGGAAATTCAATGATTGAAGAGCGTTGTGATTTATGCTAAAAT GTAATTTTAAAACTATACTATTGTATAATATGATATGATGTAAGTCATTATATGGTGTACAGATACACCCTTTGTTTGTG TATACATTTTTTTTCCAAGGTTGACAAATACTTATATGTTGTTTTTTAAATTTGAACATTGATGATGATTGAAATTGAAA TTGAA
CDS sequence (LotjaGi1g1v0180900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGGGGATTGTTACAAATGGGGTTTGTGATGGGGCAGTGAATGAGATGAATGGTAACCATTCACCCTCAAAGGAAAC CTTAGCTCCAGTCAAGTCCCCTAGGGGTTCCCTGAGTCCACAGAGAGGCCAGAATGGAGGACCTAATTTCCCAGTTGATG GGGTGATTGAGCCGTCGATTGAGCAGCTCTATGAAAATGTGTGTGACATGCAGAGTTCTGATCAGTCACCCTCAAGGAAA AGTTTTGGATCTGATGGTGATGAGTCTAGGATTGATTCGGAGTTGCGCCAGCTAGTTGGAGGACGGATGAGGGAGGTGGA GATAATGGAAGAGGAAGTGGAAGTCGAGGTGGAAAAAGAGCGGGGAGGGAGTTCTAGTGGTGAAATTTCTTCTGGAGTGG GTGGTTTATCATCCAATGAAAAGAAGTTGGATAAGGTGCATGAGATTCAATCTGCAACTACTAGTTCTGTTTCCACAGAA AAATCTGTCAAAGCATTGAACTCACAGTTGGATGCTTCACCTAAATCAAAACCCAAAGGAAAAAGTCCTCCTGCAAAAGC TCCTTTGGAAAGAAAGAATGATAAGCCTCTATTGAGAAAACAAACTAAAGGAGTTGCTAGCGGTGTGAAGAGTTTGAAGA GTTCTCCTTTGGGAAAGTCAGTGTCGCTGAATCGAGTTGAGAATTCAGCCGAATCAGCCTTAGATAAACCAGAGAGGGCA CCAATATTGCTAAAGCAAGCAAGAGATCTGATTTCATCAGGAGATAATCCACAGAAAGCTCTTGAATTAGCTCTTCAGGC AATGAATCTTTTGGAGAAGCTTGGTAATGGAAAACCAAGTTTGGAGCTGGTTATGTGTTTACATGTTACTGCAGCAATCT ATTGCAATTTGGGTCAATACAACGAGGCAATTCCAATTCTCGAGCGCTCGATTGAGATTCCTGTTATTGGGGAAAGTCAG CAGCATGCCCTTGCAAAATTTGCCGGTCACATGCAACTGGGAGACACCTATGCTATGCTGGGCCAGCTTGAGAATTCAAT TATGTGCTACAGTTCTGGTTTTGAAGTCCAGAGGCAGGTTTTGGGAGAAACAGACCCAAGAGTCGGCGAAACTTGTCGAT ACGTGGCTGAGGCTAATGTTCAAGCTTTGCAATTCGATGAAGCAGAGAGGCTCTGTCAGATGGCTCTTGACATTCATAAA GCAAATAGTTCAGCCCCTTCACTTGAAGAGGCTGCTGATAGGAGGCTCATGGGCCTCATATTGGATACAAAGGGAAATCA CGAAGCGGCTCTCGAGCATCTTGTTTTAGCCAGCATGGCAATGGTAGCAAATGGCCAAGAAGTGGAAGTGGCTTCTGTTG ACTGCAGCATTGGAGACACATACTTATCCATGTCCCGATATGATGAGGCCGTCTTCGCGTATGAGAAAGCGCTAACAGTT TTCAAGACTGGAAAAGGAGAGAATCATCCTGCTGTCGGATCAGTCTTCGTACGTTTGGCTGACTTGCATAACAGGACAGG GAAGATAAAGGAGTCGAAATCATATTGCGATAGTGCACTTCGAATATACGAGAATCCAATGCCTGGAGTTAATCCAGAGG AGATTGCTAGTGGTCTTACGAATGTTTCGGCCATCTATGAATCAATGAATGAGCTTGAAAAGGCACTCAAGTTACTTCAG AAAGCACTGCTGATATATAATGACAGCCCTGGACAGCAAAGCTCAATAGCAGGGATTGAAGCTCAGATGGGGGTCATGTA CTACATGCTGGGGAACTATACTGAATCTTACAACACATTGAAGAATGCTATTACGAAGCTTCGTGCGATCGGAGAGAAGA AATCGTCATTCATTGGAATTGCTCTTAATCAAATGGGACTTGCCTGTGTACAGCTTTATGCCTTTGGTGAGGCTACGGAA TTGTTTGAAGAAGCAAAGAGTATTTTGGAACATGAGTATGGACCTTATCACCCTGAAACGCTTGGGGTTTATAGTAATCT TGCTGGCACATATGATGCAATTGGCAGGCTGGATGAGGCAATTCAAATTCTGGAGTATGTTGTTAGTGTGAGGGAGGAAA AGCTTGGAACAGCAAATCCTGATGTTGATGATGAGAAGAGAAGGTTGAGTGAGTTGTTGAAAGAAGCAGGTAGAGTTCGG AGCAGAAAAGTCATGTCACTTGAGAACCTTCTTGATGCCAATGCTCGCATTCCAAACATCAACCTTGTCATCAAGGCCTG A
Protein sequence (LotjaGi1g1v0180900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPGIVTNGVCDGAVNEMNGNHSPSKETLAPVKSPRGSLSPQRGQNGGPNFPVDGVIEPSIEQLYENVCDMQSSDQSPSRK SFGSDGDESRIDSELRQLVGGRMREVEIMEEEVEVEVEKERGGSSSGEISSGVGGLSSNEKKLDKVHEIQSATTSSVSTE KSVKALNSQLDASPKSKPKGKSPPAKAPLERKNDKPLLRKQTKGVASGVKSLKSSPLGKSVSLNRVENSAESALDKPERA PILLKQARDLISSGDNPQKALELALQAMNLLEKLGNGKPSLELVMCLHVTAAIYCNLGQYNEAIPILERSIEIPVIGESQ QHALAKFAGHMQLGDTYAMLGQLENSIMCYSSGFEVQRQVLGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIHK ANSSAPSLEEAADRRLMGLILDTKGNHEAALEHLVLASMAMVANGQEVEVASVDCSIGDTYLSMSRYDEAVFAYEKALTV FKTGKGENHPAVGSVFVRLADLHNRTGKIKESKSYCDSALRIYENPMPGVNPEEIASGLTNVSAIYESMNELEKALKLLQ KALLIYNDSPGQQSSIAGIEAQMGVMYYMLGNYTESYNTLKNAITKLRAIGEKKSSFIGIALNQMGLACVQLYAFGEATE LFEEAKSILEHEYGPYHPETLGVYSNLAGTYDAIGRLDEAIQILEYVVSVREEKLGTANPDVDDEKRRLSELLKEAGRVR SRKVMSLENLLDANARIPNINLVIKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 217 | 217 | - | – | |
| PANTHER | 1 | 737 | 737 | 0.0 | – | |
| PANTHER | 1 | 737 | 737 | 0.0 | – | |
| MobiDBLite | 65 | 80 | 16 | - | – | |
| MobiDBLite | 81 | 123 | 43 | - | – | |
| MobiDBLite | 149 | 175 | 27 | - | – | |
| MobiDBLite | 184 | 199 | 16 | - | – | |
| Gene3D | 238 | 437 | 200 | 1.6E-20 | ||
| SUPERFAMILY | 256 | 697 | 442 | 4.64E-20 | ||
| SMART | 284 | 317 | 34 | 190.0 | ||
| ProSiteProfiles | 284 | 317 | 34 | 5.133 | ||
| Pfam | 285 | 313 | 29 | 0.018 | – | |
| ProSiteProfiles | 327 | 360 | 34 | 5.458 | ||
| SMART | 327 | 360 | 34 | 17.0 | ||
| SMART | 369 | 402 | 34 | 76.0 | ||
| Gene3D | 438 | 612 | 175 | 2.5E-26 | ||
| Pfam | 450 | 525 | 76 | 1.7E-8 | – | |
| SMART | 451 | 484 | 34 | 2.9 | ||
| ProSiteProfiles | 451 | 694 | 244 | 15.998 | ||
| ProSiteProfiles | 451 | 484 | 34 | 8.88 | ||
| SMART | 493 | 526 | 34 | 8.3 | ||
| ProSiteProfiles | 493 | 526 | 34 | 5.428 | ||
| ProSiteProfiles | 536 | 569 | 34 | 8.467 | ||
| SMART | 536 | 569 | 34 | 0.78 | ||
| Coils | 542 | 569 | 28 | - | – | |
| ProSiteProfiles | 577 | 610 | 34 | 5.635 | ||
| SMART | 577 | 610 | 34 | 43.0 | ||
| Gene3D | 613 | 723 | 111 | 2.8E-18 | ||
| SMART | 619 | 652 | 34 | 46.0 | ||
| ProSiteProfiles | 619 | 652 | 34 | 5.487 | ||
| Pfam | 619 | 689 | 71 | 3.3E-10 | – | |
| ProSiteProfiles | 661 | 694 | 34 | 7.523 | ||
| SMART | 661 | 694 | 34 | 45.0 | ||
| Coils | 702 | 722 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0180900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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